MGE detailed information
MGE type: Genomic_island MGE length: 29552 bp
Accession: NZ_CP119400 Location: 4004560..4034111 Organism: Escherichia coli strain MRE162 substr. NOR Replicon: chromosome
Accession: NZ_CP119400 Location: 4004560..4034111 Organism: Escherichia coli strain MRE162 substr. NOR Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PX809_RS19490 (4002158) | 4002158..4002883 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| PX809_RS19495 (4002920) | 4002920..4003459 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| PX809_RS19500 (4003524) | 4003524..4004078 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| PX809_RS19505 (4004560) | 4004560..4005156 | - | 597 | WP_097450870.1 | ISKra4 family transposase ISCep1 | VF |
| PX809_RS19510 (4005633) | 4005633..4006235 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PX809_RS19515 (4007689) | 4007689..4008405 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PX809_RS19520 (4008425) | 4008425..4009531 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| PX809_RS19525 (4009596) | 4009596..4010576 | + | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| PX809_RS19530 (4010584) | 4010584..4011234 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| PX809_RS19535 (4011371) | 4011371..4011514 | + | 144 | Protein_3817 | HNH endonuclease | - |
| PX809_RS19540 (4012282) | 4012282..4012425 | - | 144 | Protein_3818 | hypothetical protein | - |
| PX809_RS19545 (4012510) | 4012510..4012707 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| PX809_RS19550 (4012727) | 4012727..4013215 | - | 489 | WP_000777664.1 | DUF5983 family protein | - |
| PX809_RS19555 (4013212) | 4013212..4013589 | - | 378 | WP_000854919.1 | TA system toxin CbtA family protein | Toxin Detail |
| PX809_RS19560 (4013636) | 4013636..4014010 | - | 375 | WP_001285608.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PX809_RS19565 (4014090) | 4014090..4014311 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| PX809_RS19570 (4014398) | 4014398..4014874 | - | 477 | WP_001560293.1 | RadC family protein | - |
| PX809_RS19575 (4014889) | 4014889..4015368 | - | 480 | WP_000706978.1 | antirestriction protein | - |
| PX809_RS19580 (4015634) | 4015634..4016452 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| PX809_RS19585 (4016542) | 4016542..4016775 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| PX809_RS19590 (4016781) | 4016781..4017458 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| PX809_RS19595 (4017606) | 4017606..4018286 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| PX809_RS19600 (4018489) | 4018489..4019373 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| PX809_RS19605 (4019479) | 4019479..4020441 | + | 963 | WP_001672324.1 | hypothetical protein | - |
| PX809_RS19610 (4020438) | 4020438..4021292 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| PX809_RS19615 (4022920) | 4022920..4023168 | - | 249 | WP_000573210.1 | hypothetical protein | - |
| PX809_RS19620 (4023273) | 4023273..4024004 | + | 732 | Protein_3834 | inovirus Gp2 family protein | - |
| PX809_RS19625 (4024514) | 4024514..4024966 | + | 453 | WP_001100706.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| PX809_RS19630 (4025395) | 4025395..4025996 | + | 602 | Protein_3836 | IS481 family transposase ISKpn28 | Transposase |
| PX809_RS19635 (4025985) | 4025985..4026200 | + | 216 | WP_095516826.1 | IS481 family transposase ISKpn28 | Transposase |
| PX809_RS19640 (4027618) | 4027618..4028184 | + | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| PX809_RS19645 (4028431) | 4028431..4029006 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| PX809_RS19650 (4029075) | 4029075..4029311 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| PX809_RS19655 (4029308) | 4029308..4029466 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| PX809_RS19660 (4029554) | 4029554..4030102 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| PX809_RS19665 (4030121) | 4030121..4030465 | - | 345 | Protein_3843 | ProQ/FINO family protein | - |
| PX809_RS19670 (4030771) | 4030771..4030944 | + | 174 | WP_153274857.1 | hypothetical protein | - |
| PX809_RS19675 (4031358) | 4031358..4031792 | + | 435 | WP_000038249.1 | H-NS family nucleoid-associated regulatory protein | - |
| PX809_RS19680 (4032209) | 4032209..4032778 | - | 570 | WP_001672323.1 | hypothetical protein | - |
| PX809_RS19685 (4032879) | 4032879..4034111 | - | 1233 | WP_000271620.1 | dNTP triphosphohydrolase | - |
| PX809_RS19695 (4035492) | 4035492..4035561 | + | 70 | Protein_3849 | hypothetical protein | - |
| PX809_RS19700 (4035572) | 4035572..4036269 | - | 698 | Protein_3850 | IS1-like element IS1F family transposase | - |
| PX809_RS19705 (4036356) | 4036356..4036424 | - | 69 | WP_211180522.1 | protein YkiE | - |
| PX809_RS19710 (4036561) | 4036561..4037082 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| PX809_RS19715 (4037079) | 4037079..4038032 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|