MGE detailed information
MGE type: Prophage MGE length: 62593 bp
Accession: NZ_CP118014 Location: 2937422..3000014 Organism: Escherichia coli strain B-766 Replicon: chromosome
Accession: NZ_CP118014 Location: 2937422..3000014 Organism: Escherichia coli strain B-766 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT280_RS14385 (2933321) | 2933321..2934541 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| PT280_RS14390 (2934666) | 2934666..2935361 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| PT280_RS14395 (2935314) | 2935314..2936606 | - | 1293 | WP_071524606.1 | voltage-gated ClC-type chloride channel ClcB | - |
| PT280_RS14400 (2936765) | 2936765..2937379 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| PT280_RS14405 (2937422) | 2937422..2938276 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| PT280_RS14410 (2938278) | 2938278..2938895 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| PT280_RS14415 (2938906) | 2938906..2941329 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| PT280_RS14420 (2941390) | 2941390..2943816 | - | 2427 | WP_000041685.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| PT280_RS14425 (2944015) | 2944015..2944320 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| PT280_RS14430 (2944428) | 2944428..2945138 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| PT280_RS14435 (2945141) | 2945141..2945701 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| PT280_RS14440 (2945736) | 2945736..2946077 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| PT280_RS14445 (2946212) | 2946212..2946538 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| PT280_RS14450 (2946744) | 2946744..2947958 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| PT280_RS14455 (2947970) | 2947970..2948989 | + | 1020 | WP_000836076.1 | Zn-dependent oxidoreductase | - |
| PT280_RS14460 (2949177) | 2949177..2950457 | - | 1281 | WP_000876956.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| PT280_RS14465 (2950492) | 2950492..2950743 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| PT280_RS14470 (2950816) | 2950816..2953293 | - | 2478 | WP_000048348.1 | exonuclease | - |
| PT280_RS14475 (2953386) | 2953386..2953577 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| PT280_RS14480 (2953574) | 2953574..2953762 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| PT280_RS14485 (2954330) | 2954330..2954548 | - | 219 | WP_001171942.1 | protein YdfC | - |
| PT280_RS14490 (2954578) | 2954578..2954706 | - | 129 | WP_000344964.1 | protein YdfB | - |
| PT280_RS14495 (2954708) | 2954708..2954863 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| PT280_RS14500 (2955030) | 2955030..2955437 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| PT280_RS14505 (2955521) | 2955521..2955751 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| PT280_RS14510 (2955735) | 2955735..2956256 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| PT280_RS14515 (2956237) | 2956237..2957202 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| PT280_RS14520 (2957243) | 2957243..2957665 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| PT280_RS14525 (2957662) | 2957662..2958151 | + | 490 | Protein_2804 | class I SAM-dependent methyltransferase | - |
| PT280_RS14530 (2958629) | 2958629..2959050 | + | 422 | Protein_2805 | hypothetical protein | - |
| PT280_RS14535 (2959706) | 2959706..2960776 | + | 1071 | Protein_2806 | ISNCY family transposase ISCARN112 | Transposase |
| PT280_RS14540 (2960849) | 2960849..2960998 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| PT280_RS14545 (2961435) | 2961435..2961767 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| PT280_RS14550 (2961970) | 2961970..2962275 | - | 306 | WP_001326990.1 | protein YdfV | - |
| PT280_RS14555 (2962300) | 2962300..2962539 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| PT280_RS14560 (2962539) | 2962539..2962826 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| PT280_RS14565 (2962898) | 2962898..2963053 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| PT280_RS14570 (2963270) | 2963270..2963521 | + | 252 | WP_000980994.1 | protein Rem | - |
| PT280_RS14575 (2963588) | 2963588..2963866 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| PT280_RS14580 (2963868) | 2963868..2964917 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| PT280_RS14585 (2964931) | 2964931..2965683 | + | 753 | WP_001047135.1 | antitermination protein | - |
| PT280_RS14590 (2965961) | 2965961..2966050 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| PT280_RS14595 (2966105) | 2966105..2966317 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| PT280_RS14600 (2966618) | 2966618..2966833 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| PT280_RS14605 (2967197) | 2967197..2967367 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| PT280_RS14610 (2967587) | 2967587..2967802 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| PT280_RS14615 (2967807) | 2967807..2968118 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| PT280_RS14620 (2968115) | 2968115..2968648 | + | 534 | WP_001092971.1 | lysozyme | - |
| PT280_RS14625 (2968645) | 2968645..2969142 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| PT280_RS14630 (2969505) | 2969505..2969717 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| PT280_RS14635 (2969728) | 2969728..2969916 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| PT280_RS14640 (2969919) | 2969919..2969984 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| PT280_RS14645 (2969989) | 2969989..2970219 | + | 231 | WP_000720962.1 | protein YnfN | - |
| PT280_RS14650 (2970391) | 2970391..2970564 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| PT280_RS14655 (2970716) | 2970716..2971126 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| PT280_RS14660 (2971184) | 2971184..2971417 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| PT280_RS14665 (2971806) | 2971806..2972351 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| PT280_RS14670 (2972326) | 2972326..2974251 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| PT280_RS14675 (2974248) | 2974248..2974454 | + | 207 | WP_000198149.1 | gpW family protein | - |
| PT280_RS14680 (2974451) | 2974451..2976052 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| PT280_RS14685 (2976033) | 2976033..2977352 | + | 1320 | WP_000123305.1 | S49 family peptidase | - |
| PT280_RS14690 (2977362) | 2977362..2977694 | + | 333 | WP_001295978.1 | head decoration protein | - |
| PT280_RS14695 (2977750) | 2977750..2978775 | + | 1026 | WP_000063280.1 | major capsid protein | - |
| PT280_RS14700 (2978817) | 2978817..2979215 | + | 399 | WP_000158921.1 | DNA-packaging protein FI | - |
| PT280_RS14705 (2979227) | 2979227..2979580 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| PT280_RS14710 (2979592) | 2979592..2980170 | + | 579 | WP_000985119.1 | phage tail protein | - |
| PT280_RS14715 (2980167) | 2980167..2980562 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| PT280_RS14720 (2980570) | 2980570..2981310 | + | 741 | WP_001349920.1 | phage tail protein | - |
| PT280_RS14725 (2981326) | 2981326..2981748 | + | 423 | WP_000479150.1 | phage minor tail protein G | - |
| PT280_RS14730 (2981730) | 2981730..2982164 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| PT280_RS14735 (2982157) | 2982157..2984718 | + | 2562 | WP_000840335.1 | phage tail tape measure protein | - |
| PT280_RS14740 (2984715) | 2984715..2985044 | + | 330 | WP_000847360.1 | phage tail protein | - |
| PT280_RS14745 (2985044) | 2985044..2985742 | + | 699 | WP_001152622.1 | phage minor tail protein L | - |
| PT280_RS14750 (2985748) | 2985748..2986491 | + | 744 | WP_001349921.1 | C40 family peptidase | - |
| PT280_RS14755 (2986488) | 2986488..2987060 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| PT280_RS14760 (2987121) | 2987121..2990534 | + | 3414 | WP_000033679.1 | host specificity protein J | - |
| PT280_RS14765 (2990605) | 2990605..2991204 | + | 600 | WP_001233072.1 | hypothetical protein | VF |
| PT280_RS14770 (2991269) | 2991269..2994343 | + | 3075 | WP_000279140.1 | phage tail protein | - |
| PT280_RS14775 (2994343) | 2994343..2994918 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| PT280_RS14780 (2995016) | 2995016..2995606 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| PT280_RS14785 (2995923) | 2995923..2996156 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| PT280_RS14790 (2996225) | 2996225..2996338 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| PT280_RS14795 (2996859) | 2996859..2998226 | + | 1368 | Protein_2858 | MHS family MFS transporter | - |
| PT280_RS14800 (2998315) | 2998315..2999775 | + | 1461 | WP_000527779.1 | mannitol dehydrogenase family protein | - |
| PT280_RS14805 (2999811) | 2999811..3000014 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| PT280_RS14810 (3000192) | 3000192..3000878 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| PT280_RS14815 (3000967) | 3000967..3001713 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| PT280_RS14820 (3001850) | 3001850..3003895 | + | 2046 | WP_001299399.1 | peptidyl-dipeptidase Dcp | - |
| PT280_RS14825 (3003940) | 3003940..3004458 | - | 519 | WP_001024810.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|