MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104348 bp
Accession: NZ_CP117959 Location: 3025736..3130083 Organism: Escherichia coli strain B-2207 Replicon: chromosome
Accession: NZ_CP117959 Location: 3025736..3130083 Organism: Escherichia coli strain B-2207 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT284_RS15435 (3022135) | 3022135..3022932 | - | 798 | WP_001522323.1 | Dr fimbrial biogenesis chaperone DraB | - |
| PT284_RS15440 (3023186) | 3023186..3023491 | - | 306 | WP_001522322.1 | AFA-III adhesin operon transcriptional regulator AfaA | - |
| PT284_RS15445 (3024292) | 3024292..3024549 | + | 258 | WP_001522321.1 | Dr hemagglutinin AFA-III operon transcriptional regulator AfaF | - |
| PT284_RS15450 (3024988) | 3024988..3025230 | - | 243 | WP_001522318.1 | hypothetical protein | - |
| PT284_RS15455 (3025304) | 3025304..3026517 | + | 1214 | WP_171844376.1 | IS3 family transposase | - |
| PT284_RS15460 (3026958) | 3026958..3027347 | - | 390 | WP_001522311.1 | cytochrome b562 | - |
| PT284_RS15465 (3028534) | 3028534..3028881 | + | 348 | WP_223866576.1 | Bifunctional folate synthesis protein | VF |
| PT284_RS15470 (3029296) | 3029296..3032901 | - | 3606 | WP_001522306.1 | AAA domain-containing protein | - |
| PT284_RS15475 (3033109) | 3033109..3033735 | - | 627 | WP_001522305.1 | hypothetical protein | - |
| PT284_RS15480 (3033879) | 3033879..3034051 | - | 173 | Protein_2883 | Rpn family recombination-promoting nuclease/putative transposase | - |
| PT284_RS15485 (3034139) | 3034139..3034462 | - | 324 | WP_157919120.1 | hypothetical protein | - |
| PT284_RS15490 (3034598) | 3034598..3035074 | + | 477 | WP_001522303.1 | ProQ/FinO family protein | - |
| PT284_RS15495 (3035076) | 3035076..3035609 | - | 534 | WP_001522302.1 | hypothetical protein | - |
| PT284_RS15500 (3035887) | 3035887..3036120 | - | 234 | WP_001522301.1 | AlpA family transcriptional regulator | - |
| PT284_RS15505 (3036189) | 3036189..3036379 | - | 191 | Protein_2888 | hypothetical protein | - |
| PT284_RS15510 (3036552) | 3036552..3036962 | - | 411 | WP_001522299.1 | putative zinc ribbon protein | - |
| PT284_RS15515 (3036959) | 3036959..3037342 | - | 384 | WP_016234003.1 | putative zinc ribbon protein | - |
| PT284_RS15520 (3037510) | 3037510..3038075 | - | 566 | Protein_2891 | inovirus Gp2 family protein | - |
| PT284_RS15525 (3038271) | 3038271..3038465 | + | 195 | WP_000236756.1 | hypothetical protein | - |
| PT284_RS15530 (3038754) | 3038754..3038871 | - | 118 | Protein_2893 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| PT284_RS15535 (3039811) | 3039811..3040017 | + | 207 | WP_001095913.1 | AlpA family transcriptional regulator | - |
| PT284_RS15540 (3040105) | 3040105..3040713 | + | 609 | WP_077634145.1 | hypothetical protein | - |
| PT284_RS15545 (3041363) | 3041363..3041510 | + | 148 | Protein_2896 | AAA family ATPase | - |
| PT284_RS15550 (3042700) | 3042700..3043855 | + | 1156 | Protein_2897 | hypothetical protein | - |
| PT284_RS15555 (3043939) | 3043939..3044811 | + | 873 | WP_068879482.1 | GTPase family protein | - |
| PT284_RS15560 (3045143) | 3045143..3047839 | + | 2697 | Protein_2899 | AIDA repeat-containing protein | - |
| PT284_RS15565 (3047926) | 3047926..3048672 | - | 747 | Protein_2900 | IS21-like element ISEc12 family helper ATPase IstB | - |
| PT284_RS15570 (3048687) | 3048687..3050227 | - | 1541 | Protein_2901 | IS21 family transposase ISEc12 | Transposase |
| PT284_RS15575 (3050422) | 3050422..3050850 | + | 429 | Protein_2902 | autotransporter domain-containing protein | - |
| PT284_RS15580 (3051167) | 3051167..3051985 | + | 819 | WP_001522287.1 | DUF932 domain-containing protein | - |
| PT284_RS15585 (3051985) | 3051985..3052161 | + | 177 | WP_001522285.1 | hypothetical protein | - |
| PT284_RS15590 (3052256) | 3052256..3052729 | + | 474 | WP_001522284.1 | antirestriction protein | - |
| PT284_RS15595 (3052744) | 3052744..3053220 | + | 477 | WP_001186724.1 | RadC family protein | - |
| PT284_RS15600 (3053401) | 3053401..3054897 | + | 1497 | Protein_2907 | IS21-like element ISEc10 family transposase | - |
| PT284_RS15605 (3054894) | 3054894..3055648 | + | 755 | Protein_2908 | IS21 family transposase ISEc10 | Transposase |
| PT284_RS15610 (3055700) | 3055700..3055921 | + | 222 | WP_023909484.1 | DUF987 domain-containing protein | - |
| PT284_RS15615 (3056001) | 3056001..3056375 | + | 375 | WP_001522275.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PT284_RS15620 (3056422) | 3056422..3056796 | + | 375 | WP_023909482.1 | TA system toxin CbtA family protein | Toxin Detail |
| PT284_RS15625 (3056793) | 3056793..3057283 | + | 491 | Protein_2912 | DUF5983 family protein | - |
| PT284_RS15630 (3057295) | 3057295..3057492 | + | 198 | WP_001522268.1 | DUF957 domain-containing protein | - |
| PT284_RS15635 (3057577) | 3057577..3058443 | + | 867 | WP_023909479.1 | DUF4942 domain-containing protein | - |
| PT284_RS15640 (3058515) | 3058515..3058778 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PT284_RS15645 (3058775) | 3058775..3059101 | + | 327 | WP_001522265.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PT284_RS15650 (3059578) | 3059578..3059748 | + | 171 | Protein_2917 | IS110 family transposase | - |
| PT284_RS15655 (3060559) | 3060559..3061542 | + | 984 | WP_066008910.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| PT284_RS15660 (3061614) | 3061614..3062762 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| PT284_RS15665 (3062786) | 3062786..3064462 | + | 1677 | WP_066008909.1 | hypothetical protein | VF |
| PT284_RS15670 (3064472) | 3064472..3065212 | + | 741 | WP_001327873.1 | Alpha-xylosidase | VF |
| PT284_RS15675 (3065209) | 3065209..3067236 | + | 2028 | WP_000579529.1 | Alpha-galactosidase | VF |
| PT284_RS15680 (3067271) | 3067271..3068509 | + | 1239 | WP_001161824.1 | hypothetical protein | VF |
| PT284_RS15685 (3068671) | 3068671..3069666 | - | 996 | WP_001208051.1 | hypothetical protein | - |
| PT284_RS15690 (3069672) | 3069672..3070700 | - | 1029 | WP_001044673.1 | hypothetical protein | VF |
| PT284_RS15695 (3070803) | 3070803..3072890 | - | 2088 | WP_244557675.1 | hypothetical protein | VF |
| PT284_RS15700 (3072938) | 3072938..3074506 | - | 1569 | WP_274270820.1 | tetratricopeptide repeat protein | - |
| PT284_RS15705 (3074655) | 3074655..3075890 | - | 1236 | WP_000668515.1 | hypothetical protein | - |
| PT284_RS15710 (3075906) | 3075906..3076302 | - | 397 | Protein_2929 | pantoate--beta-alanine ligase | - |
| PT284_RS15715 (3076314) | 3076314..3076985 | - | 672 | WP_000590253.1 | hypothetical protein | VF |
| PT284_RS15720 (3076982) | 3076982..3077758 | - | 777 | WP_000124284.1 | hypothetical protein | VF |
| PT284_RS15725 (3078932) | 3078932..3079468 | - | 537 | WP_000942819.1 | hypothetical protein | VF |
| PT284_RS15730 (3079470) | 3079470..3080063 | - | 594 | WP_001327868.1 | hypothetical protein | VF |
| PT284_RS15735 (3080036) | 3080036..3080638 | - | 603 | WP_001327867.1 | hypothetical protein | VF |
| PT284_RS15740 (3080644) | 3080644..3081060 | - | 417 | Protein_2935 | hypothetical protein | VF |
| PT284_RS15745 (3081241) | 3081241..3082581 | - | 1341 | Protein_2936 | IS4 family transposase | - |
| PT284_RS15750 (3082717) | 3082717..3084399 | - | 1683 | WP_021519491.1 | glycolate permease GlcA | - |
| PT284_RS15755 (3084754) | 3084754..3086924 | - | 2171 | Protein_2938 | malate synthase G | - |
| PT284_RS15760 (3086946) | 3086946..3087350 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| PT284_RS15765 (3087355) | 3087355..3088578 | - | 1224 | WP_001194816.1 | glycolate oxidase subunit GlcF | - |
| PT284_RS15770 (3088589) | 3088589..3089641 | - | 1053 | WP_000943077.1 | glycolate oxidase subunit GlcE | - |
| PT284_RS15775 (3089641) | 3089641..3091140 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| PT284_RS15780 (3091384) | 3091384..3092148 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| PT284_RS15785 (3092155) | 3092155..3093297 | - | 1143 | WP_001300526.1 | protein YghO | - |
| PT284_RS15790 (3093707) | 3093707..3095395 | + | 1689 | WP_244594925.1 | hypothetical protein | VF |
| PT284_RS15795 (3095392) | 3095392..3096306 | + | 915 | WP_001077166.1 | NAD-dependent epimerase/dehydratase family protein | - |
| PT284_RS15800 (3096338) | 3096338..3096586 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| PT284_RS15805 (3096586) | 3096586..3097758 | + | 1173 | WP_000524970.1 | hypothetical protein | VF |
| PT284_RS15810 (3097793) | 3097793..3098872 | - | 1080 | WP_001318997.1 | LPS export ABC transporter permease LptG | - |
| PT284_RS15815 (3098869) | 3098869..3099940 | - | 1072 | Protein_2950 | LPS export ABC transporter permease LptF | - |
| PT284_RS15820 (3099971) | 3099971..3100531 | - | 561 | WP_001298770.1 | YtfJ family protein | - |
| PT284_RS15825 (3100543) | 3100543..3101367 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| PT284_RS15830 (3101367) | 3101367..3102716 | - | 1350 | WP_000896896.1 | lipopolysaccharide biosynthesis protein | - |
| PT284_RS15835 (3102762) | 3102762..3103520 | - | 759 | WP_000339531.1 | ATP-binding protein | - |
| PT284_RS15840 (3103552) | 3103552..3104265 | - | 714 | WP_001076243.1 | dTMP kinase | - |
| PT284_RS15845 (3104439) | 3104439..3105131 | + | 693 | WP_001190781.1 | dTMP kinase | - |
| PT284_RS15850 (3105180) | 3105180..3106679 | - | 1500 | WP_000933250.1 | inorganic phosphate transporter PitB | - |
| PT284_RS15855 (3106971) | 3106971..3108830 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| PT284_RS15860 (3109035) | 3109035..3109901 | + | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| PT284_RS15865 (3109930) | 3109930..3110011 | - | 82 | Protein_2960 | hypothetical protein | - |
| PT284_RS15870 (3110024) | 3110024..3110272 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| PT284_RS15875 (3110285) | 3110285..3110626 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| PT284_RS15880 (3110619) | 3110619..3111107 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| PT284_RS15885 (3111100) | 3111100..3111594 | - | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| PT284_RS15890 (3111594) | 3111594..3113297 | - | 1704 | WP_000083052.1 | hydrogenase 2 large subunit | - |
| PT284_RS15895 (3113294) | 3113294..3114472 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| PT284_RS15900 (3114462) | 3114462..3115448 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| PT284_RS15905 (3115451) | 3115451..3116569 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| PT284_RS15910 (3116758) | 3116758..3117045 | - | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| PT284_RS15915 (3117164) | 3117164..3118048 | - | 885 | Protein_2970 | YghX family hydrolase | - |
| PT284_RS15920 (3118205) | 3118205..3119245 | + | 1041 | WP_000262172.1 | L-glyceraldehyde 3-phosphate reductase | - |
| PT284_RS15925 (3119285) | 3119285..3119779 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| PT284_RS15930 (3119970) | 3119970..3120854 | + | 885 | WP_000018760.1 | hypothetical protein | VF |
| PT284_RS15935 (3121126) | 3121126..3121551 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| PT284_RS15940 (3121558) | 3121558..3122292 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| PT284_RS15945 (3122544) | 3122544..3123731 | + | 1188 | WP_066009680.1 | cystathionine beta-lyase | - |
| PT284_RS15950 (3123871) | 3123871..3124530 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| PT284_RS15955 (3124570) | 3124570..3125469 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| PT284_RS15960 (3125663) | 3125663..3126826 | + | 1164 | WP_001058802.1 | alcohol dehydrogenase | - |
| PT284_RS15965 (3126931) | 3126931..3127758 | + | 828 | WP_078046077.1 | 2,5-didehydrogluconate reductase DkgA | - |
| PT284_RS15970 (3127958) | 3127958..3128884 | + | 927 | WP_000691619.1 | YbjP/YqhG family protein | - |
| PT284_RS15975 (3128935) | 3128935..3129192 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| PT284_RS15980 (3129235) | 3129235..3131454 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| PT284_RS15985 (3131565) | 3131565..3132977 | - | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| PT284_RS15990 (3133052) | 3133052..3133789 | - | 738 | WP_000965722.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|