MGE detailed information
MGE type: Prophage MGE length: 53096 bp
Accession: NZ_CP117659 Location: 2777211..2830306 Organism: Escherichia albertii strain BIA_13 Replicon: chromosome
Accession: NZ_CP117659 Location: 2777211..2830306 Organism: Escherichia albertii strain BIA_13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS034_RS13595 () | 2773048..2773911 | + | 864 | WP_059217927.1 | spermidine/putrescine ABC transporter permease PotB | - |
| PS034_RS13600 () | 2774144..2774293 | - | 150 | Protein_2667 | tail fiber assembly protein | - |
| PS034_RS13605 () | 2774420..2774505 | + | 86 | Protein_2668 | YkgJ family cysteine cluster protein | - |
| PS034_RS13610 () | 2774528..2775118 | - | 591 | WP_273810481.1 | T3SS effector guanine nucleotide exchange factor EspM2 | - |
| PS034_RS13615 () | 2775302..2775928 | + | 627 | WP_273810480.1 | T3SS effector NleG family protein | - |
| PS034_RS13620 () | 2776029..2777085 | + | 1057 | Protein_2671 | T3SS effector EspW | - |
| PS034_RS13625 () | 2777211..2777846 | - | 636 | WP_273810479.1 | hypothetical protein | VF |
| PS034_RS13635 () | 2779437..2779706 | - | 270 | WP_273810477.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS034_RS13640 () | 2779708..2781021 | - | 1314 | WP_273810476.1 | ISNCY family transposase KIS | Transposase |
| PS034_RS13645 () | 2781086..2781685 | - | 600 | WP_273822029.1 | hypothetical protein | VF |
| PS034_RS13650 () | 2781755..2785168 | - | 3414 | WP_273822030.1 | host specificity protein J | - |
| PS034_RS13655 () | 2785229..2785801 | - | 573 | WP_273822031.1 | tail assembly protein | - |
| PS034_RS13660 () | 2785798..2786541 | - | 744 | WP_273810473.1 | C40 family peptidase | - |
| PS034_RS13665 () | 2786822..2787841 | - | 1020 | WP_273822032.1 | IS110 family transposase ISEc66 | Transposase |
| PS034_RS13670 () | 2787989..2788687 | - | 699 | WP_137652057.1 | phage minor tail protein L | - |
| PS034_RS13675 () | 2788687..2789016 | - | 330 | WP_001543782.1 | phage tail protein | - |
| PS034_RS13680 () | 2789013..2791574 | - | 2562 | WP_273810472.1 | phage tail tape measure protein | - |
| PS034_RS13685 () | 2791567..2791992 | - | 426 | WP_273810471.1 | phage tail assembly protein T | - |
| PS034_RS13690 () | 2791974..2792396 | - | 423 | WP_032329098.1 | phage minor tail protein G | - |
| PS034_RS13695 () | 2792412..2793152 | - | 741 | WP_059274995.1 | phage tail protein | - |
| PS034_RS13700 () | 2793160..2793555 | - | 396 | WP_000683141.1 | phage minor tail U family protein | - |
| PS034_RS13705 () | 2793552..2794130 | - | 579 | WP_045903848.1 | phage tail protein | - |
| PS034_RS13710 () | 2794142..2794495 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| PS034_RS13715 () | 2794507..2794893 | - | 387 | WP_273810470.1 | DNA-packaging protein FI | - |
| PS034_RS13720 () | 2794935..2795960 | - | 1026 | WP_273810469.1 | major capsid protein | - |
| PS034_RS13725 () | 2796016..2796348 | - | 333 | WP_033548197.1 | head decoration protein | - |
| PS034_RS13730 () | 2796358..2797689 | - | 1332 | WP_273810468.1 | S49 family peptidase | - |
| PS034_RS13735 () | 2797670..2799271 | - | 1602 | WP_137653554.1 | phage portal protein | - |
| PS034_RS13740 () | 2799268..2799474 | - | 207 | WP_000198149.1 | gpW family protein | - |
| PS034_RS13745 () | 2799471..2801396 | - | 1926 | WP_273810466.1 | phage terminase large subunit family protein | - |
| PS034_RS13750 () | 2801371..2801916 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| PS034_RS13755 () | 2802410..2803027 | - | 618 | WP_273810465.1 | Rha family transcriptional regulator | - |
| PS034_RS13760 () | 2803218..2803424 | - | 207 | WP_123057736.1 | lysis system o-spanin lipoprotein Rz1 | - |
| PS034_RS13765 () | 2803941..2804474 | - | 534 | WP_273810464.1 | lysozyme | - |
| PS034_RS13770 () | 2804580..2804852 | + | 273 | WP_059217952.1 | hypothetical protein | - |
| PS034_RS13775 () | 2804821..2805162 | - | 342 | WP_137651313.1 | YdfR family protein | - |
| PS034_RS13780 () | 2805166..2805372 | - | 207 | WP_137651312.1 | class II holin family protein | - |
| PS034_RS13785 () | 2805923..2806000 | - | 78 | Protein_2704 | phage holin | - |
| PS034_RS13810 () | 2806898..2807779 | + | 882 | WP_021526742.1 | hypothetical protein | - |
| PS034_RS13815 () | 2807795..2808058 | + | 264 | WP_021526743.1 | hypothetical protein | - |
| PS034_RS13820 () | 2808048..2808446 | + | 399 | WP_024190350.1 | hypothetical protein | - |
| PS034_RS13825 () | 2808482..2808850 | - | 369 | WP_021526745.1 | antiterminator Q family protein | - |
| PS034_RS13830 () | 2808840..2809217 | - | 378 | Protein_2709 | RusA family crossover junction endodeoxyribonuclease | - |
| PS034_RS13835 () | 2809218..2810273 | - | 1056 | WP_273810463.1 | DUF968 domain-containing protein | - |
| PS034_RS13840 () | 2810275..2810553 | - | 279 | WP_137651311.1 | hypothetical protein | - |
| PS034_RS13845 () | 2810721..2810876 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2810888..2810946 | + | 59 | - | - | Antitoxin Detail |
| PS034_RS13850 () | 2811481..2812254 | + | 774 | WP_059217920.1 | alpha/beta hydrolase | - |
| PS034_RS13855 () | 2812611..2813021 | - | 411 | WP_137651310.1 | DUF977 family protein | - |
| PS034_RS13860 () | 2813029..2813790 | - | 762 | WP_059217918.1 | DUF1627 domain-containing protein | - |
| PS034_RS13865 () | 2813813..2814559 | - | 747 | WP_273810462.1 | ATP-binding protein | - |
| PS034_RS13870 () | 2814566..2815528 | - | 963 | WP_137651308.1 | helix-turn-helix domain-containing protein | - |
| PS034_RS13875 () | 2815552..2815977 | - | 426 | WP_059217916.1 | toxin YdaT family protein | - |
| PS034_RS13880 () | 2816000..2816296 | - | 297 | WP_059217915.1 | toxin YdaS | - |
| PS034_RS13885 () | 2816420..2816896 | + | 477 | WP_059217914.1 | DNA-binding transcriptional repressor RacR | - |
| PS034_RS13890 () | 2817213..2817365 | + | 153 | WP_000379569.1 | DUF1391 family protein | - |
| PS034_RS13895 () | 2817377..2818015 | + | 639 | WP_059222115.1 | hypothetical protein | - |
| PS034_RS13900 () | 2818016..2818225 | - | 210 | WP_137651320.1 | hypothetical protein | - |
| PS034_RS13905 () | 2818789..2818977 | + | 189 | WP_000449200.1 | cell division inhibition protein DicB | - |
| PS034_RS13910 () | 2818974..2819164 | + | 191 | Protein_2725 | DUF1482 family protein | - |
| PS034_RS13915 () | 2819257..2821722 | + | 2466 | WP_102204082.1 | exonuclease | - |
| PS034_RS13920 () | 2821784..2822053 | + | 270 | WP_000003742.1 | excisionase | - |
| PS034_RS13925 () | 2822022..2823140 | + | 1119 | WP_059217629.1 | hypothetical protein ; Integrase | Integrase |
| PS034_RS13930 () | 2823307..2824101 | + | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| PS034_RS13935 () | 2824098..2825144 | + | 1047 | WP_054410786.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| PS034_RS13940 () | 2825202..2825663 | + | 462 | WP_032330099.1 | DUF3592 domain-containing protein | - |
| PS034_RS13945 () | 2825660..2826448 | + | 789 | WP_059215411.1 | TPM domain-containing protein | - |
| PS034_RS13950 () | 2826585..2827406 | - | 822 | WP_265464335.1 | NAD-dependent protein deacylase | - |
| PS034_RS13955 () | 2827422..2828333 | - | 912 | WP_273822033.1 | N-acetylglucosamine kinase | - |
| PS034_RS13960 () | 2828361..2829605 | - | 1245 | WP_001251383.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| PS034_RS13965 () | 2829605..2830306 | - | 702 | WP_273822034.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| PS034_RS13970 () | 2830299..2831498 | - | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| PS034_RS13975 () | 2831821..2835267 | + | 3447 | WP_273822035.1 | transcription-repair coupling factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|