MGE detailed information
MGE type: Prophage MGE length: 68516 bp
Accession: NZ_CP117628 Location: 1756509..1825024 Organism: Escherichia albertii strain BIA_22 Replicon: chromosome
Accession: NZ_CP117628 Location: 1756509..1825024 Organism: Escherichia albertii strain BIA_22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS041_RS08595 () | 1752417..1753616 | + | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| PS041_RS08600 () | 1753609..1754310 | + | 702 | WP_001059716.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| PS041_RS08605 () | 1754310..1755554 | + | 1245 | WP_001251383.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| PS041_RS08610 () | 1755582..1756493 | + | 912 | WP_273825257.1 | N-acetylglucosamine kinase | - |
| PS041_RS08615 () | 1756509..1757330 | + | 822 | WP_000952753.1 | NAD-dependent protein deacylase | - |
| PS041_RS08620 () | 1757468..1758256 | - | 789 | WP_273825259.1 | TPM domain-containing protein | - |
| PS041_RS08625 () | 1758253..1758714 | - | 462 | WP_002461997.1 | DUF3592 domain-containing protein | - |
| PS041_RS08630 () | 1758772..1759818 | - | 1047 | WP_000759312.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| PS041_RS08635 () | 1759815..1760609 | - | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| PS041_RS08640 () | 1760776..1761894 | - | 1119 | WP_059217629.1 | hypothetical protein ; Integrase | Integrase |
| PS041_RS08645 () | 1761863..1762132 | - | 270 | WP_273825260.1 | excisionase | - |
| PS041_RS08650 () | 1762194..1764658 | - | 2465 | Protein_1678 | 3'-5' exoribonuclease | - |
| PS041_RS08655 () | 1764751..1764941 | - | 191 | Protein_1679 | DUF1482 family protein | - |
| PS041_RS08660 () | 1764938..1765126 | - | 189 | WP_000449200.1 | cell division inhibition protein DicB | - |
| PS041_RS08665 () | 1765690..1765899 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| PS041_RS08670 () | 1765900..1766538 | - | 639 | WP_054413035.1 | hypothetical protein | - |
| PS041_RS08675 () | 1766550..1766702 | - | 153 | WP_000379569.1 | DUF1391 family protein | - |
| PS041_RS08680 () | 1767019..1767495 | - | 477 | WP_059217914.1 | DNA-binding transcriptional repressor RacR | - |
| PS041_RS08685 () | 1767619..1767915 | + | 297 | WP_059217915.1 | toxin YdaS | - |
| PS041_RS08690 () | 1767938..1768363 | + | 426 | WP_059217916.1 | toxin YdaT family protein | - |
| PS041_RS08695 () | 1768387..1769319 | + | 933 | WP_273825262.1 | helix-turn-helix domain-containing protein | - |
| PS041_RS08700 () | 1769326..1770071 | + | 746 | Protein_1688 | IS21 family transposase ISCsa9 | Transposase |
| PS041_RS08705 () | 1770094..1770855 | + | 762 | WP_059217918.1 | DUF1627 domain-containing protein | - |
| PS041_RS08710 () | 1770863..1771273 | + | 411 | WP_059217919.1 | DUF977 family protein | - |
| PS041_RS08715 () | 1771629..1772402 | - | 774 | WP_059217920.1 | alpha/beta hydrolase | - |
| - | 1772937..1772995 | - | 59 | - | - | Antitoxin Detail |
| PS041_RS08720 () | 1773007..1773162 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| PS041_RS08725 () | 1773330..1773608 | + | 279 | WP_032084570.1 | hypothetical protein | - |
| PS041_RS08730 () | 1773610..1774659 | + | 1050 | WP_273825264.1 | DUF968 domain-containing protein | - |
| PS041_RS08735 () | 1774672..1775039 | + | 368 | Protein_1695 | RusA family crossover junction endodeoxyribonuclease | - |
| PS041_RS08740 () | 1775032..1775400 | + | 369 | WP_059217965.1 | antiterminator Q family protein | - |
| PS041_RS08745 () | 1775543..1776361 | + | 819 | WP_072252351.1 | CPBP family intramembrane metalloprotease | - |
| PS041_RS08760 () | 1777161..1777238 | + | 78 | Protein_1698 | phage holin | - |
| PS041_RS08765 () | 1777258..1779096 | + | 1839 | WP_273825266.1 | DUF1737 domain-containing protein | - |
| PS041_RS08770 () | 1779523..1779738 | + | 216 | WP_059217956.1 | class II holin family protein | - |
| PS041_RS08775 () | 1779872..1780213 | + | 342 | WP_059217957.1 | YdfR family protein | - |
| PS041_RS08780 () | 1780182..1780454 | - | 273 | WP_059217952.1 | hypothetical protein | - |
| PS041_RS08785 () | 1780569..1781102 | + | 534 | WP_273825268.1 | lysozyme | - |
| PS041_RS08790 () | 1781626..1781832 | + | 207 | WP_123057736.1 | lysis system o-spanin lipoprotein Rz1 | - |
| PS041_RS08795 () | 1782023..1782640 | + | 618 | WP_273825270.1 | Rha family transcriptional regulator | - |
| PS041_RS08800 () | 1783134..1783679 | + | 546 | WP_273825272.1 | DNA-packaging protein | - |
| PS041_RS08805 () | 1783654..1785579 | + | 1926 | WP_273825273.1 | phage terminase large subunit family protein | - |
| PS041_RS08810 () | 1785576..1785782 | + | 207 | WP_000198149.1 | gpW family protein | - |
| PS041_RS08815 () | 1785779..1787380 | + | 1602 | WP_161538481.1 | phage portal protein | - |
| PS041_RS08820 () | 1787361..1788680 | + | 1320 | WP_044717958.1 | S49 family peptidase | - |
| PS041_RS08825 () | 1788690..1789022 | + | 333 | WP_024225564.1 | head decoration protein | - |
| PS041_RS08830 () | 1789078..1790103 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| PS041_RS08835 () | 1790145..1790540 | + | 396 | WP_021559792.1 | DNA-packaging protein FI | - |
| PS041_RS08840 () | 1790552..1790893 | + | 342 | WP_273825275.1 | head-tail joining protein | - |
| PS041_RS08845 () | 1790881..1792254 | - | 1374 | WP_000244358.1 | IS4 family transposase ISEc13 | Transposase |
| PS041_RS08850 () | 1792420..1792548 | + | 129 | Protein_1716 | Ail/Lom family outer membrane beta-barrel protein | - |
| PS041_RS08855 () | 1792608..1793924 | + | 1317 | WP_273825276.1 | ISNCY family transposase KIS | Transposase |
| PS041_RS08860 () | 1793926..1794195 | + | 270 | WP_001023428.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS041_RS08865 () | 1794329..1795026 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| PS041_RS08870 () | 1795083..1795385 | + | 303 | WP_059217930.1 | hypothetical protein | - |
| PS041_RS08875 () | 1795435..1795710 | + | 276 | WP_236707406.1 | T3SS effector NleG family protein | - |
| PS041_RS08880 () | 1795950..1796576 | - | 627 | WP_059217929.1 | hypothetical protein | VF |
| PS041_RS08885 () | 1796758..1797348 | + | 591 | WP_273825279.1 | hypothetical protein | VF |
| PS041_RS08890 () | 1797578..1797727 | + | 150 | Protein_1724 | tail fiber assembly protein | - |
| PS041_RS08895 () | 1797957..1798820 | - | 864 | WP_059217927.1 | spermidine/putrescine ABC transporter permease PotB | - |
| PS041_RS08900 () | 1798804..1799940 | - | 1137 | WP_273825280.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| PS041_RS08905 () | 1800190..1801419 | + | 1230 | WP_025237152.1 | peptidase T | - |
| PS041_RS08910 () | 1801545..1802666 | - | 1122 | WP_010336349.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| PS041_RS08915 () | 1802742..1804202 | - | 1461 | WP_000735428.1 | two-component system sensor histidine kinase PhoQ | - |
| PS041_RS08920 () | 1804202..1804873 | - | 672 | WP_001265484.1 | Transcriptional regulatory protein PhoP | VF |
| PS041_RS08925 () | 1805041..1806411 | - | 1371 | WP_000423769.1 | adenylosuccinate lyase | - |
| PS041_RS08930 () | 1806415..1807056 | - | 642 | WP_024164967.1 | high frequency lysogenization protein HflD | - |
| PS041_RS08935 () | 1807092..1808198 | - | 1107 | WP_001516209.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| PS041_RS08940 () | 1808252..1808713 | - | 462 | WP_000476091.1 | phosphatase NudJ | - |
| PS041_RS08945 () | 1808723..1809376 | - | 654 | WP_059215413.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| PS041_RS08950 () | 1809547..1810797 | + | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| PS041_RS08955 () | 1810911..1811408 | - | 498 | Protein_1737 | hypothetical protein ; Integrase | Integrase |
| PS041_RS08960 () | 1811729..1812124 | - | 396 | WP_273825281.1 | hypothetical protein | - |
| PS041_RS08965 () | 1812243..1812341 | + | 99 | Protein_1739 | DNA-binding protein | - |
| PS041_RS08970 () | 1812336..1812440 | + | 105 | Protein_1740 | DUF1364 domain-containing protein | - |
| PS041_RS08975 () | 1812443..1812805 | + | 363 | Protein_1741 | crossover junction endodeoxyribonuclease RusA | - |
| PS041_RS08980 () | 1812836..1813153 | + | 318 | Protein_1742 | bacteriophage antitermination protein Q | - |
| PS041_RS08985 () | 1813311..1814054 | + | 744 | WP_125295974.1 | hypothetical protein | - |
| PS041_RS08990 () | 1814142..1814222 | + | 81 | Protein_1744 | DUF3927 domain-containing protein | - |
| PS041_RS08995 () | 1815398..1816345 | - | 948 | WP_273825282.1 | Protease 7 | VF |
| PS041_RS09000 () | 1816960..1817178 | + | 219 | WP_001065864.1 | cell division-associated protein YmgF | - |
| PS041_RS09005 () | 1817392..1817727 | - | 336 | WP_000979973.1 | YmgD family protein | - |
| PS041_RS09010 () | 1817731..1818075 | - | 345 | WP_000725791.1 | glycine zipper domain-containing protein | - |
| PS041_RS09015 () | 1818077..1818238 | - | 162 | WP_038429893.1 | hypothetical protein | - |
| PS041_RS09020 () | 1818510..1818614 | + | 105 | WP_000455704.1 | hypothetical protein | - |
| PS041_RS09025 () | 1818680..1819123 | + | 444 | Protein_1751 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| PS041_RS09035 () | 1820520..1820861 | + | 342 | WP_273825283.1 | hypothetical protein | - |
| PS041_RS09040 () | 1820849..1824372 | + | 3524 | Protein_1754 | putative autotransporter | VF |
| PS041_RS09045 () | 1824758..1825024 | - | 267 | WP_001185665.1 | cell division topological specificity factor MinE | - |
| PS041_RS09050 () | 1825028..1825840 | - | 813 | WP_000101044.1 | septum site-determining protein MinD | - |
| PS041_RS09055 () | 1825864..1826553 | - | 690 | WP_002462028.1 | septum site-determining protein MinC | - |
| PS041_RS09060 () | 1826679..1826972 | + | 294 | WP_024164782.1 | YcgL domain-containing protein | - |
| PS041_RS09065 () | 1827044..1827703 | + | 660 | WP_044717099.1 | fumarylacetoacetate hydrolase family protein | - |
| PS041_RS09070 () | 1827795..1828241 | + | 447 | WP_273825285.1 | YcgN family cysteine cluster protein | - |
| PS041_RS09075 () | 1828723..1829820 | - | 1098 | WP_000737250.1 | porin OmpC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|