MGE detailed information
MGE type: Conjugative plasmid MGE length: 98343 bp
Accession: NZ_CP117622 Location: 1..98343 Organism: Escherichia albertii strain BIA_24 Replicon: plasmid pEA24_2
Accession: NZ_CP117622 Location: 1..98343 Organism: Escherichia albertii strain BIA_24 Replicon: plasmid pEA24_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS039_RS24270 (1) | 1..858 | + | 858 | WP_273810623.1 | incFII family plasmid replication initiator RepA | - |
| PS039_RS24275 (1768) | 1768..1905 | + | 138 | Protein_1 | XRE family transcriptional regulator | - |
| PS039_RS24280 (1925) | 1925..2188 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| PS039_RS24285 (2178) | 2178..2372 | + | 195 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS039_RS24290 (2402) | 2402..5362 | - | 2961 | WP_273774644.1 | Tn3 family transposase | - |
| PS039_RS24295 (5582) | 5582..6142 | + | 561 | WP_021573890.1 | Tn3 family transposase ISPsy42 | Transposase |
| PS039_RS24300 (6226) | 6226..6333 | + | 108 | Protein_6 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS039_RS24305 (6792) | 6792..8534 | - | 1743 | WP_001513513.1 | ABC transporter ATP-binding protein | - |
| PS039_RS24310 (8537) | 8537..10078 | - | 1542 | WP_273810624.1 | lasso peptide isopeptide bond-forming cyclase | - |
| PS039_RS24315 (10081) | 10081..10707 | - | 627 | WP_001513515.1 | lasso peptide biosynthesis B2 protein | - |
| PS039_RS24320 (11046) | 11046..11222 | + | 177 | WP_001513516.1 | lasso peptide microcin J25 | - |
| PS039_RS24325 (11443) | 11443..11538 | - | 96 | WP_000609144.1 | DinQ-like type I toxin DqlB | - |
| PS039_RS24330 (12038) | 12038..12307 | + | 270 | WP_242795561.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS039_RS24335 (12665) | 12665..12940 | + | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| PS039_RS24340 (13018) | 13018..14205 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| PS039_RS24345 (14262) | 14262..15023 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| PS039_RS24350 (15023) | 15023..16060 | - | 1038 | WP_032241771.1 | Hemin transport system permease protein HmuU | VF |
| PS039_RS24355 (16060) | 16060..17058 | - | 999 | WP_004175650.1 | ABC transporter substrate-binding protein | - |
| PS039_RS24360 (17208) | 17208..17312 | - | 105 | Protein_18 | integrase core domain-containing protein | - |
| PS039_RS24365 (17402) | 17402..17827 | + | 426 | WP_032279819.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS24370 (17824) | 17824..18174 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS24375 (18205) | 18205..19818 | + | 1614 | WP_075211705.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS24380 (20216) | 20216..20803 | + | 588 | WP_032280144.1 | serine acetyltransferase | - |
| PS039_RS24385 (21085) | 21085..21678 | - | 594 | WP_032280163.1 | ProQ/FINO family protein | - |
| PS039_RS24390 (21797) | 21797..22054 | - | 258 | WP_075207891.1 | hypothetical protein | - |
| PS039_RS24395 (22176) | 22176..22766 | - | 591 | WP_032280054.1 | hypothetical protein | - |
| PS039_RS24400 (22766) | 22766..22999 | - | 234 | WP_032280055.1 | hypothetical protein | - |
| PS039_RS24405 (23328) | 23328..23780 | + | 453 | WP_000670960.1 | acyltransferase | - |
| PS039_RS24410 (23812) | 23812..25344 | - | 1533 | WP_001017349.1 | NAD(P)-binding domain-containing protein | - |
| PS039_RS24415 (25341) | 25341..25610 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| PS039_RS24420 (25612) | 25612..26628 | - | 1017 | WP_032280058.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PS039_RS24425 (26631) | 26631..27458 | - | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
| PS039_RS24430 (27442) | 27442..28680 | - | 1239 | WP_012006540.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| PS039_RS24435 (29220) | 29220..30353 | + | 1134 | WP_126755948.1 | DUF3800 domain-containing protein | - |
| PS039_RS24440 (30373) | 30373..30657 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| PS039_RS24445 (30654) | 30654..30851 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| PS039_RS24450 (31161) | 31161..31652 | + | 492 | WP_000528930.1 | HEPN family nuclease | - |
| PS039_RS24455 (31664) | 31664..32422 | + | 759 | WP_023063772.1 | hypothetical protein | - |
| PS039_RS24460 (32713) | 32713..34236 | + | 1524 | WP_000921251.1 | hypothetical protein | - |
| PS039_RS24465 (34271) | 34271..35395 | + | 1125 | WP_032174239.1 | DUF4238 domain-containing protein | - |
| PS039_RS24470 (35395) | 35395..35685 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| PS039_RS24475 (36475) | 36475..36888 | + | 414 | WP_000465040.1 | hypothetical protein | - |
| PS039_RS24480 (36890) | 36890..37672 | + | 783 | WP_021533580.1 | site-specific integrase | - |
| PS039_RS24485 (37845) | 37845..38198 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| PS039_RS24490 (38248) | 38248..39063 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| PS039_RS24495 (39306) | 39306..39833 | + | 528 | WP_273810645.1 | colicin B immunity protein | - |
| PS039_RS24500 (39851) | 39851..40792 | - | 942 | Protein_46 | colicin-like bacteriocin tRNase domain-containing protein | - |
| PS039_RS24505 (40848) | 40848..41314 | + | 467 | Protein_47 | IS1 family transposase IS1A | Transposase |
| PS039_RS24510 (41542) | 41542..43077 | + | 1536 | WP_256878094.1 | IS21 family transposase ISSso4 | Transposase |
| PS039_RS24515 (43094) | 43094..43849 | + | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS039_RS24520 (43950) | 43950..44189 | + | 240 | Protein_50 | IS1 family transposase | - |
| PS039_RS24525 (44569) | 44569..44919 | - | 351 | WP_273810647.1 | plasmid partitioning/stability family protein | - |
| PS039_RS24530 (44922) | 44922..45884 | - | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| PS039_RS24535 (46032) | 46032..46250 | + | 219 | Protein_53 | hypothetical protein | - |
| PS039_RS24540 (46354) | 46354..47370 | + | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| PS039_RS24545 (47917) | 47917..47991 | + | 75 | Protein_55 | hypothetical protein | - |
| PS039_RS24550 (48068) | 48068..48751 | + | 684 | WP_000085940.1 | DNA methylase | - |
| PS039_RS24555 (48752) | 48752..48973 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PS039_RS24560 (48903) | 48903..49421 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| PS039_RS24565 (49466) | 49466..50236 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| PS039_RS24570 (50649) | 50649..51074 | + | 426 | WP_024214837.1 | antirestriction protein | - |
| PS039_RS24575 (51121) | 51121..51543 | + | 423 | WP_001587500.1 | DUF1380 family protein | - |
| PS039_RS24580 (51540) | 51540..51731 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PS039_RS24585 (52769) | 52769..52999 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PS039_RS24590 (53051) | 53051..54412 | + | 1362 | WP_001825120.1 | DUF3560 domain-containing protein | - |
| PS039_RS24595 (54460) | 54460..55023 | + | 564 | WP_256878427.1 | class I SAM-dependent methyltransferase | - |
| PS039_RS24600 (55020) | 55020..55238 | + | 219 | WP_071588970.1 | hypothetical protein | - |
| PS039_RS24605 (55175) | 55175..55408 | + | 234 | WP_071588969.1 | hypothetical protein | - |
| PS039_RS24610 (55649) | 55649..55909 | + | 261 | WP_042046747.1 | hypothetical protein | - |
| PS039_RS24615 (56026) | 56026..57012 | - | 987 | WP_273810655.1 | IS110 family transposase IS1663 | Transposase |
| PS039_RS24625 (58593) | 58593..58880 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| PS039_RS24630 (58998) | 58998..59819 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| PS039_RS24635 (60116) | 60116..60763 | - | 648 | WP_155953419.1 | hypothetical protein | VF |
| PS039_RS24640 (61039) | 61039..61422 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS039_RS24645 (61614) | 61614..62261 | + | 648 | WP_096040777.1 | transcriptional regulator TraJ family protein | - |
| PS039_RS24650 (62381) | 62381..62608 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| PS039_RS24655 (62642) | 62642..63034 | + | 393 | WP_024127870.1 | type IV conjugative transfer system pilin TraA | - |
| PS039_RS24660 (63049) | 63049..63360 | + | 312 | WP_001585108.1 | type IV conjugative transfer system protein TraL | - |
| PS039_RS24665 (63382) | 63382..63948 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PS039_RS24670 (63935) | 63935..64663 | + | 729 | WP_001230809.1 | type-F conjugative transfer system secretin TraK | - |
| PS039_RS24675 (64663) | 64663..66090 | + | 1428 | WP_096937179.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS039_RS24680 (66080) | 66080..66670 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS039_RS24685 (66657) | 66657..66854 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| PS039_RS24690 (66867) | 66867..67118 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| PS039_RS24695 (67115) | 67115..67630 | + | 516 | WP_016241856.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS039_RS24700 (67765) | 67765..67986 | + | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| PS039_RS24705 (68146) | 68146..70773 | + | 2628 | WP_181668576.1 | type IV secretion system protein TraC | - |
| PS039_RS24710 (70770) | 70770..71156 | + | 387 | WP_181668575.1 | type-F conjugative transfer system protein TrbI | - |
| PS039_RS24715 (71153) | 71153..71785 | + | 633 | WP_001203749.1 | type-F conjugative transfer system protein TraW | - |
| PS039_RS24720 (71782) | 71782..72774 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PS039_RS24725 (72800) | 72800..73264 | + | 465 | WP_096948751.1 | hypothetical protein | - |
| PS039_RS24730 (73275) | 73275..73589 | + | 315 | WP_273810609.1 | hypothetical protein | - |
| PS039_RS24735 (73582) | 73582..74034 | + | 453 | WP_000069432.1 | hypothetical protein | - |
| PS039_RS24740 (74062) | 74062..74700 | + | 639 | WP_273810610.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS039_RS24745 (74697) | 74697..75077 | + | 381 | WP_273810611.1 | hypothetical protein | - |
| PS039_RS24750 (75313) | 75313..77175 | + | 1863 | WP_273810612.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS039_RS24755 (77202) | 77202..77459 | + | 258 | WP_000864328.1 | conjugal transfer protein TrbE | - |
| PS039_RS24760 (77452) | 77452..78195 | + | 744 | WP_273810613.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS039_RS24765 (78211) | 78211..78558 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| PS039_RS24770 (78560) | 78560..78874 | - | 315 | WP_000415566.1 | protein ArtA | - |
| PS039_RS24775 (78955) | 78955..79239 | + | 285 | WP_273810614.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS039_RS24780 (79226) | 79226..79771 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS039_RS24785 (79701) | 79701..80042 | + | 342 | WP_273810615.1 | P-type conjugative transfer protein TrbJ | - |
| PS039_RS24790 (80029) | 80029..80421 | + | 393 | WP_000138368.1 | F-type conjugal transfer protein TrbF | - |
| PS039_RS24795 (80408) | 80408..81781 | + | 1374 | WP_273810616.1 | conjugal transfer pilus assembly protein TraH | - |
| PS039_RS24800 (81778) | 81778..84621 | + | 2844 | WP_273810617.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS039_RS24805 (84636) | 84636..85139 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| PS039_RS24810 (85171) | 85171..85902 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PS039_RS24815 (86156) | 86156..88309 | + | 2154 | WP_273810590.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS039_RS24820 (88309) | 88309..93579 | + | 5271 | WP_273810618.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS039_RS24825 (93599) | 93599..94345 | + | 747 | WP_273810588.1 | conjugal transfer pilus acetylase TraX | - |
| PS039_RS24830 (94400) | 94400..94960 | + | 561 | WP_273810619.1 | fertility inhibition protein FinO | - |
| PS039_RS24835 (95095) | 95095..95307 | + | 213 | WP_273810620.1 | hypothetical protein | - |
| PS039_RS24840 (95553) | 95553..96014 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| PS039_RS24845 (96060) | 96060..96269 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| PS039_RS24850 (96463) | 96463..96873 | + | 411 | WP_273810621.1 | hypothetical protein | - |
| - (97244) | 97244..97305 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (97244) | 97244..97305 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (97244) | 97244..97305 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (97244) | 97244..97305 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| PS039_RS24855 (97349) | 97349..97498 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| PS039_RS24860 (97782) | 97782..98042 | + | 261 | WP_021536205.1 | replication regulatory protein RepA | - |
| PS039_RS24865 (98146) | 98146..98331 | + | 186 | WP_273810622.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|