MGE detailed information
MGE type: Conjugative plasmid MGE length: 125136 bp
Accession: NZ_CP117601 Location: 1..125136 Organism: Escherichia albertii strain BIA_32 Replicon: plasmid pEA32_1
Accession: NZ_CP117601 Location: 1..125136 Organism: Escherichia albertii strain BIA_32 Replicon: plasmid pEA32_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS047_RS23920 (1) | 1..978 | + | 978 | WP_149535082.1 | RepB family plasmid replication initiator protein | - |
| PS047_RS23925 (1263) | 1263..2003 | - | 741 | WP_001603634.1 | tyrosine-type recombinase/integrase | - |
| PS047_RS23930 (2124) | 2124..2246 | - | 123 | Protein_2 | serine/threonine protein kinase | - |
| PS047_RS23935 (2284) | 2284..2438 | + | 155 | Protein_3 | IS110 family transposase | - |
| PS047_RS23940 (2444) | 2444..2623 | - | 180 | Protein_4 | IS3 family transposase ISKpn38 | Transposase |
| PS047_RS23945 (2736) | 2736..4388 | - | 1653 | WP_273823917.1 | hypothetical protein | VF |
| PS047_RS23950 (4474) | 4474..4987 | - | 514 | Protein_6 | IS481 family transposase | - |
| PS047_RS23955 (5227) | 5227..5852 | + | 626 | Protein_7 | transposase | - |
| PS047_RS23960 (5849) | 5849..6543 | - | 695 | Protein_8 | IS21 family transposase | - |
| PS047_RS23965 (6616) | 6616..6827 | + | 212 | Protein_9 | IS91 family transposase | - |
| PS047_RS23970 (8128) | 8128..13116 | + | 4989 | WP_273823918.1 | hypothetical protein | VF |
| PS047_RS23975 (13297) | 13297..13688 | + | 392 | Protein_11 | IS481 family transposase | - |
| PS047_RS23980 (13759) | 13759..13952 | - | 194 | Protein_12 | transposase | - |
| PS047_RS23985 (14076) | 14076..14396 | - | 321 | WP_054412882.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| PS047_RS23990 (14560) | 14560..14895 | - | 336 | WP_273823919.1 | hypothetical protein | - |
| PS047_RS23995 (15854) | 15854..15981 | + | 128 | Protein_15 | IS3 family transposase | - |
| PS047_RS24000 (16005) | 16005..16127 | + | 123 | Protein_16 | transcriptional regulator | - |
| PS047_RS24005 (16716) | 16716..17537 | + | 822 | WP_273823920.1 | polysaccharide deacetylase family protein | - |
| PS047_RS24010 (17537) | 17537..18643 | + | 1107 | WP_076738652.1 | glycosyltransferase family 4 protein | - |
| PS047_RS24015 (18731) | 18731..19728 | + | 998 | Protein_19 | Lipid A biosynthesis myristoyltransferase | VF |
| PS047_RS24020 (20359) | 20359..21306 | + | 948 | WP_273823921.1 | VirK/YbjX family protein | - |
| PS047_RS24025 (21365) | 21365..21484 | + | 120 | Protein_21 | IS256 family transposase | - |
| PS047_RS24030 (22111) | 22111..22596 | + | 486 | WP_273823922.1 | heme-binding protein | - |
| PS047_RS24035 (22704) | 22704..23138 | - | 435 | WP_273823923.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| PS047_RS24040 (23828) | 23828..24578 | - | 751 | Protein_24 | transposase | - |
| PS047_RS24045 (24609) | 24609..32378 | - | 7770 | WP_273823924.1 | hypothetical protein | VF |
| PS047_RS24050 (32874) | 32874..33137 | - | 264 | WP_059236653.1 | hypothetical protein | - |
| PS047_RS24055 (33178) | 33178..33372 | + | 195 | Protein_27 | IS21 family transposase IS21 | Transposase |
| PS047_RS24060 (33480) | 33480..34521 | - | 1042 | Protein_28 | IS481 family transposase ISErsp1 | Transposase |
| PS047_RS24065 (36235) | 36235..37374 | - | 1140 | WP_273823925.1 | cytochrome d ubiquinol oxidase subunit II | - |
| PS047_RS24070 (37393) | 37393..38943 | - | 1551 | WP_059257127.1 | cytochrome ubiquinol oxidase subunit I | - |
| PS047_RS24075 (39029) | 39029..39625 | - | 597 | WP_059236661.1 | DoxX family protein | - |
| PS047_RS24080 (39643) | 39643..40356 | - | 714 | WP_072244077.1 | putative DNA-binding domain-containing protein | - |
| PS047_RS24085 (40331) | 40331..41182 | - | 852 | WP_149450315.1 | DUF692 domain-containing protein | - |
| PS047_RS24090 (41170) | 41170..41487 | - | 318 | WP_161537341.1 | hypothetical protein | - |
| PS047_RS24095 (41491) | 41491..42441 | - | 951 | WP_059257123.1 | MBL fold metallo-hydrolase | - |
| PS047_RS24100 (43270) | 43270..43809 | - | 540 | WP_273823926.1 | MarC family protein | - |
| PS047_RS24105 (44171) | 44171..45259 | - | 1089 | WP_273823927.1 | IS481 family transposase ISKpn28 | Transposase |
| PS047_RS24110 (45274) | 45274..45583 | - | 310 | Protein_38 | ATP-binding protein | - |
| PS047_RS24115 (45691) | 45691..46919 | + | 1229 | WP_273823928.1 | IS3 family transposase IS2 | Transposase |
| PS047_RS24120 (46937) | 46937..47041 | + | 105 | Protein_40 | IS110 family transposase IS621 | Transposase |
| PS047_RS24125 (47044) | 47044..47413 | - | 370 | Protein_41 | IS110 family transposase IS621 | Transposase |
| PS047_RS24130 (47444) | 47444..47641 | + | 198 | Protein_42 | transposase domain-containing protein | - |
| PS047_RS24135 (48126) | 48126..49085 | - | 960 | WP_273823929.1 | DUF523 and DUF1722 domain-containing protein | - |
| PS047_RS24140 (49979) | 49979..50659 | - | 681 | WP_273823930.1 | EAL domain-containing protein | - |
| PS047_RS24145 (50920) | 50920..51623 | + | 704 | Protein_45 | helix-turn-helix domain-containing protein | - |
| PS047_RS24150 (51931) | 51931..52606 | + | 676 | Protein_46 | transposase | - |
| PS047_RS24155 (52647) | 52647..52805 | + | 159 | Protein_47 | transposase | - |
| PS047_RS24160 (52880) | 52880..54373 | - | 1494 | WP_273823931.1 | Type II secretion system protein E | VF |
| PS047_RS24165 (54373) | 54373..56433 | - | 2061 | WP_273823932.1 | Secretin GspD 2 | VF |
| PS047_RS24170 (56463) | 56463..57422 | - | 960 | WP_273823933.1 | Type II secretion system protein C 2 | VF |
| PS047_RS24175 (57440) | 57440..57850 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| PS047_RS24180 (57917) | 57917..58726 | - | 810 | WP_273823934.1 | Prepilin peptidase PppA | VF |
| PS047_RS24185 (58882) | 58882..63423 | - | 4542 | WP_273823935.1 | hypothetical protein | VF |
| PS047_RS24190 (63721) | 63721..64929 | + | 1209 | WP_273823897.1 | IS256 family transposase IS1414 | Transposase |
| PS047_RS24195 (64952) | 64952..65230 | - | 279 | WP_273823898.1 | helix-turn-helix transcriptional regulator | - |
| PS047_RS24200 (65230) | 65230..65547 | - | 318 | WP_273823936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS047_RS24205 (66021) | 66021..67124 | - | 1104 | WP_273823899.1 | bifunctional L-1,2-propanediol dehydrogenase/glycerol dehydrogenase | - |
| PS047_RS24210 (67568) | 67568..67846 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PS047_RS24215 (67846) | 67846..68115 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PS047_RS24220 (68215) | 68215..68964 | - | 750 | Protein_60 | IS256 family transposase IS1414 | Transposase |
| PS047_RS24225 (69043) | 69043..69753 | + | 711 | WP_273823900.1 | sensor domain-containing diguanylate cyclase | - |
| PS047_RS24230 (70073) | 70073..70320 | - | 248 | Protein_62 | DUF6404 family protein | - |
| PS047_RS24235 (71269) | 71269..72126 | - | 858 | WP_273823901.1 | incFII family plasmid replication initiator RepA | - |
| PS047_RS24240 (72119) | 72119..72193 | - | 75 | WP_001367777.1 | RepA leader peptide Tap | - |
| PS047_RS24245 (72425) | 72425..72682 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| PS047_RS24250 (72992) | 72992..73474 | - | 483 | WP_000405244.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PS047_RS24255 (73465) | 73465..73767 | - | 303 | WP_273823902.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PS047_RS24260 (74005) | 74005..74154 | - | 150 | WP_074152653.1 | Hok/Gef family protein | - |
| PS047_RS24265 (74218) | 74218..75264 | + | 1047 | WP_273823903.1 | IS481 family transposase ISKpn28 | Transposase |
| - (75299) | 75299..75360 | + | 62 | NuclAT_0 | - | - |
| - (75299) | 75299..75360 | + | 62 | NuclAT_0 | - | - |
| - (75299) | 75299..75360 | + | 62 | NuclAT_0 | - | - |
| - (75299) | 75299..75360 | + | 62 | NuclAT_0 | - | - |
| PS047_RS24270 (75535) | 75535..75915 | - | 381 | Protein_70 | DUF2726 domain-containing protein | - |
| PS047_RS24275 (76109) | 76109..76321 | - | 213 | WP_059278122.1 | hypothetical protein | - |
| PS047_RS24280 (76457) | 76457..77017 | - | 561 | WP_273823904.1 | fertility inhibition protein FinO | - |
| PS047_RS24285 (77072) | 77072..77818 | - | 747 | WP_273823905.1 | conjugal transfer pilus acetylase TraX | - |
| PS047_RS24290 (77838) | 77838..83108 | - | 5271 | WP_273823906.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS047_RS24295 (83108) | 83108..85261 | - | 2154 | WP_273823907.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS047_RS24300 (85514) | 85514..86245 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PS047_RS24305 (86259) | 86259..86768 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| PS047_RS24310 (86765) | 86765..89590 | - | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS047_RS24315 (89587) | 89587..90960 | - | 1374 | WP_273823937.1 | conjugal transfer pilus assembly protein TraH | - |
| PS047_RS24320 (90947) | 90947..91339 | - | 393 | WP_040072248.1 | F-type conjugal transfer protein TrbF | - |
| PS047_RS24325 (91326) | 91326..91606 | - | 281 | Protein_81 | P-type conjugative transfer protein TrbJ | - |
| PS047_RS24330 (91596) | 91596..92141 | - | 546 | Protein_82 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS047_RS24335 (92128) | 92128..92412 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS047_RS24340 (92531) | 92531..92878 | - | 348 | WP_114011940.1 | conjugal transfer protein TrbA | - |
| PS047_RS24345 (92894) | 92894..93637 | - | 744 | WP_059219324.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS047_RS24350 (93630) | 93630..93887 | - | 258 | WP_273823938.1 | conjugal transfer protein TrbE | - |
| PS047_RS24355 (93914) | 93914..95722 | - | 1809 | WP_273823908.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS047_RS24360 (95719) | 95719..96357 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS047_RS24365 (96366) | 96366..97358 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PS047_RS24370 (97355) | 97355..97987 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| PS047_RS24375 (97984) | 97984..98370 | - | 387 | WP_000214098.1 | type-F conjugative transfer system protein TrbI | - |
| PS047_RS24380 (98367) | 98367..100997 | - | 2631 | WP_106907105.1 | type IV secretion system protein TraC | - |
| PS047_RS24385 (101123) | 101123..101485 | - | 363 | WP_029400175.1 | hypothetical protein | - |
| PS047_RS24390 (101513) | 101513..101731 | - | 219 | WP_000556751.1 | hypothetical protein | - |
| PS047_RS24395 (101811) | 101811..102284 | - | 474 | WP_114011942.1 | hypothetical protein | - |
| PS047_RS24400 (102277) | 102277..102498 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| PS047_RS24405 (102633) | 102633..103148 | - | 516 | WP_000809874.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS047_RS24410 (103145) | 103145..103465 | - | 321 | WP_001057305.1 | conjugal transfer protein TrbD | - |
| PS047_RS24415 (103452) | 103452..104042 | - | 591 | WP_000002784.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS047_RS24420 (104032) | 104032..105459 | - | 1428 | WP_273823909.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS047_RS24425 (105459) | 105459..106187 | - | 729 | WP_273823910.1 | type-F conjugative transfer system secretin TraK | - |
| PS047_RS24430 (106174) | 106174..106740 | - | 567 | WP_273823911.1 | type IV conjugative transfer system protein TraE | - |
| PS047_RS24435 (106762) | 106762..107073 | - | 312 | WP_000012118.1 | type IV conjugative transfer system protein TraL | - |
| PS047_RS24440 (107088) | 107088..107453 | - | 366 | WP_273823912.1 | type IV conjugative transfer system pilin TraA | - |
| PS047_RS24445 (107487) | 107487..107714 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| PS047_RS24450 (107808) | 107808..108494 | - | 687 | WP_273823913.1 | PAS domain-containing protein | - |
| PS047_RS24455 (108685) | 108685..109068 | - | 384 | WP_149450799.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS047_RS24460 (109380) | 109380..109970 | + | 591 | WP_001375132.1 | hypothetical protein | VF |
| PS047_RS24465 (110266) | 110266..111087 | - | 822 | Protein_109 | DUF932 domain-containing protein | - |
| PS047_RS24470 (111209) | 111209..111495 | - | 287 | Protein_110 | hypothetical protein | - |
| PS047_RS24475 (111796) | 111796..112222 | + | 427 | Protein_111 | hypothetical protein | - |
| PS047_RS24480 (112305) | 112305..112871 | - | 567 | WP_273823914.1 | class I SAM-dependent methyltransferase | - |
| PS047_RS24485 (112920) | 112920..114281 | - | 1362 | WP_273823915.1 | DUF3560 domain-containing protein | - |
| PS047_RS24490 (114333) | 114333..114563 | - | 231 | WP_000218637.1 | hypothetical protein | - |
| PS047_RS24495 (115080) | 115080..115334 | + | 255 | Protein_115 | hypothetical protein | - |
| PS047_RS24500 (115545) | 115545..115736 | - | 192 | WP_096964308.1 | hypothetical protein | - |
| PS047_RS24505 (115733) | 115733..116155 | - | 423 | WP_273823916.1 | hypothetical protein | - |
| PS047_RS24510 (116202) | 116202..116627 | - | 426 | WP_244616000.1 | antirestriction protein | - |
| PS047_RS24515 (117052) | 117052..118243 | - | 1192 | Protein_119 | IS4 family transposase ISEc60 | Transposase |
| PS047_RS24520 (118349) | 118349..119068 | - | 720 | WP_273823939.1 | hypothetical protein | - |
| PS047_RS24525 (119229) | 119229..120398 | + | 1170 | WP_000942665.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| PS047_RS24530 (120438) | 120438..120611 | + | 174 | Protein_122 | DUF4113 domain-containing protein | - |
| PS047_RS24535 (120752) | 120752..121714 | - | 963 | WP_000756325.1 | ParB family protein | - |
| PS047_RS24540 (121711) | 121711..122916 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| PS047_RS24545 (123290) | 123290..123502 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| PS047_RS24550 (123675) | 123675..123926 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PS047_RS24555 (123923) | 123923..124210 | + | 288 | WP_059278077.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS047_RS24560 (124212) | 124212..124490 | + | 279 | Protein_128 | IS3 family transposase ISKpn37 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|