MGE detailed information
MGE type: Genomic_island MGE length: 36377 bp
Accession: NZ_CP117583 Location: 1723656..1760032 Organism: Escherichia albertii strain BIA_41 Replicon: chromosome
Accession: NZ_CP117583 Location: 1723656..1760032 Organism: Escherichia albertii strain BIA_41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS045_RS08340 (1719793) | 1719793..1720137 | + | 345 | WP_025238538.1 | outer membrane protein assembly factor BamE | - |
| PS045_RS08345 (1720183) | 1720183..1720473 | - | 291 | WP_000014564.1 | RnfH family protein | - |
| PS045_RS08350 (1720463) | 1720463..1720900 | - | 438 | WP_024164737.1 | type II toxin-antitoxin system toxin RatA | - |
| PS045_RS08355 (1721071) | 1721071..1721553 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| PS045_RS08365 (1722334) | 1722334..1723575 | + | 1242 | WP_256879410.1 | integrase | - |
| PS045_RS08370 (1723656) | 1723656..1724363 | - | 708 | WP_256879409.1 | RNA ligase family protein | - |
| PS045_RS08375 (1724363) | 1724363..1724902 | - | 540 | WP_256879408.1 | hypothetical protein | - |
| PS045_RS08380 (1724899) | 1724899..1726182 | - | 1284 | WP_256879407.1 | DUF3696 domain-containing protein | - |
| PS045_RS08385 (1726475) | 1726475..1726804 | - | 330 | WP_256879406.1 | hypothetical protein | - |
| PS045_RS08390 (1726931) | 1726931..1730548 | - | 3618 | WP_256879405.1 | hypothetical protein | - |
| PS045_RS08395 (1730909) | 1730909..1731697 | + | 789 | WP_256879404.1 | hypothetical protein | - |
| PS045_RS08400 (1731694) | 1731694..1734564 | + | 2871 | WP_256879403.1 | NERD domain-containing protein | - |
| PS045_RS08405 (1734719) | 1734719..1735009 | + | 291 | WP_256879402.1 | hypothetical protein | - |
| PS045_RS08410 (1735445) | 1735445..1739296 | + | 3852 | WP_256879401.1 | hypothetical protein | - |
| PS045_RS08415 (1739342) | 1739342..1739944 | + | 603 | WP_273774863.1 | hypothetical protein | - |
| PS045_RS08420 (1739971) | 1739971..1741563 | - | 1593 | WP_048237919.1 | IS66 family transposase ISEc23 | Transposase |
| PS045_RS08425 (1741594) | 1741594..1741944 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS045_RS08430 (1741941) | 1741941..1742366 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS045_RS08435 (1742617) | 1742617..1742772 | + | 156 | WP_001358523.1 | hypothetical protein | - |
| PS045_RS08440 (1743041) | 1743041..1743922 | - | 882 | WP_256879399.1 | hypothetical protein | - |
| PS045_RS08445 (1744036) | 1744036..1744275 | + | 240 | WP_072011107.1 | AlpA family phage regulatory protein | - |
| PS045_RS08450 (1744369) | 1744369..1745481 | + | 1113 | WP_256879398.1 | IS4 family transposase IS421 | Transposase |
| PS045_RS08455 (1745791) | 1745791..1746675 | + | 885 | WP_256879397.1 | 50S ribosome-binding GTPase | - |
| PS045_RS08460 (1746912) | 1746912..1747628 | + | 717 | WP_256879396.1 | WYL domain-containing protein | - |
| PS045_RS08465 (1747690) | 1747690..1748160 | + | 471 | WP_256879395.1 | hypothetical protein | - |
| PS045_RS08470 (1748237) | 1748237..1748956 | + | 720 | WP_256879394.1 | hypothetical protein | - |
| PS045_RS08475 (1749053) | 1749053..1749331 | - | 279 | WP_256879393.1 | helix-turn-helix transcriptional regulator | - |
| PS045_RS08480 (1749595) | 1749595..1750029 | - | 435 | WP_256921800.1 | DUF3987 domain-containing protein | - |
| PS045_RS08485 (1750023) | 1750023..1751006 | - | 984 | WP_256921792.1 | DUF3987 domain-containing protein | - |
| PS045_RS08490 (1751326) | 1751326..1751997 | - | 672 | WP_256879392.1 | inovirus Gp2 family protein | - |
| PS045_RS08495 (1752395) | 1752395..1753213 | + | 819 | WP_256879391.1 | DUF932 domain-containing protein | - |
| PS045_RS08500 (1753246) | 1753246..1753719 | + | 474 | WP_256879390.1 | DNA repair protein RadC | - |
| PS045_RS08505 (1753727) | 1753727..1753948 | + | 222 | WP_256879389.1 | DUF987 family protein | - |
| PS045_RS08510 (1753966) | 1753966..1754286 | + | 321 | WP_256879388.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PS045_RS08515 (1754324) | 1754324..1754647 | + | 324 | WP_256879418.1 | TA system toxin CbtA family protein | Toxin Detail |
| PS045_RS08520 (1754964) | 1754964..1755056 | + | 93 | Protein_1672 | integrase | - |
| PS045_RS08525 (1755641) | 1755641..1755742 | + | 102 | WP_256879387.1 | small membrane protein YkgR | - |
| PS045_RS08530 (1755773) | 1755773..1756066 | - | 294 | WP_125282434.1 | hypothetical protein | - |
| PS045_RS08535 (1756204) | 1756204..1756470 | + | 267 | WP_000812362.1 | type B 50S ribosomal protein L31 | - |
| PS045_RS08540 (1756467) | 1756467..1756607 | + | 141 | WP_000866440.1 | type B 50S ribosomal protein L36 | - |
| PS045_RS08550 (1757816) | 1757816..1760032 | + | 2217 | WP_256879386.1 | alpha-amylase family glycosyl hydrolase | - |
| PS045_RS08555 (1760347) | 1760347..1761324 | + | 978 | WP_107192824.1 | glutarate dioxygenase GlaH | - |
| PS045_RS08560 (1761344) | 1761344..1762612 | + | 1269 | WP_256879417.1 | L-2-hydroxyglutarate oxidase | - |
| PS045_RS08565 (1762635) | 1762635..1764083 | + | 1449 | WP_000772851.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|