MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP117400 Location: 2470384..2482469 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 Replicon: chromosome
Accession: NZ_CP117400 Location: 2470384..2482469 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP96_RS12125 (2466305) | 2466305..2467507 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PQP96_RS12130 (2467520) | 2467520..2468971 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PQP96_RS12135 (2469115) | 2469115..2470122 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| PQP96_RS12140 (2470381) | 2470381..2471847 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| PQP96_RS12145 (2472655) | 2472655..2473369 | + | 715 | Protein_2376 | helix-turn-helix domain-containing protein | - |
| PQP96_RS12150 (2473425) | 2473425..2474333 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PQP96_RS12155 (2474476) | 2474476..2474808 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PQP96_RS12160 (2474798) | 2474798..2475013 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PQP96_RS12165 (2475165) | 2475165..2475413 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP96_RS12170 (2475403) | 2475403..2475687 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP96_RS12175 (2475858) | 2475858..2476247 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PQP96_RS12180 (2476299) | 2476299..2477378 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQP96_RS12185 (2477571) | 2477571..2478059 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQP96_RS12190 (2478104) | 2478104..2479612 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PQP96_RS12195 (2479602) | 2479602..2480843 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PQP96_RS12200 (2480913) | 2480913..2482469 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PQP96_RS12205 (2482646) | 2482646..2483932 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PQP96_RS12210 (2483907) | 2483907..2484932 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PQP96_RS12215 (2484991) | 2484991..2485782 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PQP96_RS12220 (2485828) | 2485828..2486919 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |