MGE detailed information
MGE type: Genomic_island MGE length: 8837 bp
Accession: NZ_CP117378 Location: 835856..844692 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM038 Replicon: chromosome
Accession: NZ_CP117378 Location: 835856..844692 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM038 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP81_RS04000 (831329) | 831329..832846 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP81_RS04005 (832922) | 832922..833467 | - | 546 | WP_000133986.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP81_RS04010 (833732) | 833732..834490 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP81_RS04020 (834775) | 834775..835581 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| PQP81_RS04025 (835856) | 835856..836107 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PQP81_RS04030 (836284) | 836284..836511 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP81_RS04035 (836511) | 836511..836909 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP81_RS04040 (837717) | 837717..838253 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| PQP81_RS04045 (838300) | 838300..838932 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP81_RS04050 (839651) | 839651..840232 | + | 582 | WP_001244652.1 | hypothetical protein | VF |
| PQP81_RS04055 (840352) | 840352..842841 | + | 2490 | WP_000705485.1 | hypothetical protein | VF |
| PQP81_RS04060 (842882) | 842882..843625 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| PQP81_RS04065 (843622) | 843622..844692 | + | 1071 | WP_000147758.1 | hypothetical protein | - |
| PQP81_RS04070 (844799) | 844799..845305 | + | 507 | WP_000093328.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP81_RS04075 (845292) | 845292..846050 | + | 759 | WP_000134800.1 | transcriptional regulator | - |
| PQP81_RS04080 (846260) | 846260..847090 | - | 831 | WP_000503693.1 | nickel/cobalt efflux protein RcnA | - |
| PQP81_RS04085 (847212) | 847212..847484 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP81_RS04090 (847515) | 847515..848744 | - | 1230 | WP_000036827.1 | amino acid permease | - |
| PQP81_RS04095 (848886) | 848886..849341 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|