MGE detailed information
MGE type: Conjugative plasmid MGE length: 99201 bp
Accession: NZ_CP117372 Location: 1..99201 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM049 Replicon: plasmid pRM049_1
Accession: NZ_CP117372 Location: 1..99201 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM049 Replicon: plasmid pRM049_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ06_RS23635 (PQQ06_23635) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| PQQ06_RS23640 (PQQ06_23640) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQQ06_RS23645 (PQQ06_23645) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQQ06_RS23650 (PQQ06_23650) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQQ06_RS23655 (PQQ06_23655) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQQ06_RS23660 (PQQ06_23660) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQQ06_RS23665 (PQQ06_23665) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQQ06_RS23670 (PQQ06_23670) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQQ06_RS23675 (PQQ06_23675) | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| PQQ06_RS23680 (PQQ06_23680) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQQ06_RS23685 (PQQ06_23685) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQQ06_RS23690 (PQQ06_23690) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQQ06_RS23695 (PQQ06_23695) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQQ06_RS23700 (PQQ06_23700) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQQ06_RS23705 (PQQ06_23705) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQQ06_RS23710 (PQQ06_23710) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQQ06_RS23715 (PQQ06_23715) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQQ06_RS23720 (PQQ06_23720) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQQ06_RS23725 (PQQ06_23725) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQQ06_RS23730 (PQQ06_23730) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQQ06_RS23735 (PQQ06_23735) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQQ06_RS23740 (PQQ06_23740) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ06_RS23745 (PQQ06_23745) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQQ06_RS23750 (PQQ06_23750) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQQ06_RS23755 (PQQ06_23755) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQQ06_RS23760 (PQQ06_23760) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQQ06_RS23765 (PQQ06_23765) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQQ06_RS23770 (PQQ06_23770) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQQ06_RS23775 (PQQ06_23775) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQQ06_RS23780 (PQQ06_23780) | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ06_RS23785 (PQQ06_23785) | 18776..18955 | - | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQQ06_RS23790 (PQQ06_23790) | 19259..19963 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ06_RS23795 (PQQ06_23795) | 19969..20109 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PQQ06_RS23800 (PQQ06_23800) | 20595..21332 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQQ06_RS23805 (PQQ06_23805) | 21329..21553 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQQ06_RS23810 (PQQ06_23810) | 21764..23257 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQQ06_RS23815 (PQQ06_23815) | 23288..24172 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| PQQ06_RS23820 (PQQ06_23820) | 24389..25603 | + | 1215 | WP_000214123.1 | Multidrug resistance protein MdtL | ARG |
| PQQ06_RS23825 (PQQ06_23825) | 25631..25936 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| PQQ06_RS23830 (PQQ06_23830) | 26048..26236 | + | 189 | Protein_40 | IS91 family transposase | - |
| PQQ06_RS23835 (PQQ06_23835) | 26203..27402 | - | 1200 | WP_274898594.1 | Multidrug resistance protein MdtG | ARG |
| PQQ06_RS23840 (PQQ06_23840) | 27508..28158 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQQ06_RS23845 (PQQ06_23845) | 28190..28432 | - | 243 | WP_000844627.1 | transposase | - |
| PQQ06_RS23850 (PQQ06_23850) | 28738..29574 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQQ06_RS23855 (PQQ06_23855) | 29574..30377 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| PQQ06_RS23860 (PQQ06_23860) | 30438..31253 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| PQQ06_RS23865 (PQQ06_23865) | 31560..31871 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQQ06_RS23870 (PQQ06_23870) | 32045..32830 | + | 786 | WP_274898595.1 | ParA family protein | - |
| PQQ06_RS23875 (PQQ06_23875) | 32834..34015 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQQ06_RS23880 (PQQ06_23880) | 34064..34336 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQQ06_RS23885 (PQQ06_23885) | 34389..35024 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQQ06_RS23890 (PQQ06_23890) | 35116..35259 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQQ06_RS23895 (PQQ06_23895) | 35586..35963 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| PQQ06_RS23900 (PQQ06_23900) | 35956..36237 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQQ06_RS23905 (PQQ06_23905) | 36212..36886 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQQ06_RS23910 (PQQ06_23910) | 36879..37385 | + | 507 | WP_000566443.1 | hypothetical protein | - |
| PQQ06_RS23915 (PQQ06_23915) | 37391..37702 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQQ06_RS23920 (PQQ06_23920) | 37711..38211 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| PQQ06_RS23925 (PQQ06_23925) | 38215..39642 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQQ06_RS23930 (PQQ06_23930) | 39642..40298 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQQ06_RS23935 (PQQ06_23935) | 40354..40971 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQQ06_RS23940 (PQQ06_23940) | 41204..41482 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQQ06_RS23945 (PQQ06_23945) | 41573..42061 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQQ06_RS23950 (PQQ06_23950) | 42076..44268 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQQ06_RS23955 (PQQ06_23955) | 44268..44501 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQQ06_RS23960 (PQQ06_23960) | 44483..45100 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQQ06_RS23965 (PQQ06_23965) | 45268..48240 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQQ06_RS23970 (PQQ06_23970) | 48237..50102 | + | 1866 | WP_274898596.1 | conjugative transfer system coupling protein TraD | - |
| PQQ06_RS23975 (PQQ06_23975) | 50152..50697 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQQ06_RS23980 (PQQ06_23980) | 50654..51283 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQQ06_RS23985 (PQQ06_23985) | 51293..51739 | + | 447 | WP_274898592.1 | hypothetical protein | - |
| PQQ06_RS23990 (PQQ06_23990) | 51749..52126 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQQ06_RS23995 (PQQ06_23995) | 52126..52788 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQQ06_RS24000 (PQQ06_24000) | 53124..53489 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQQ06_RS24005 (PQQ06_24005) | 53634..53915 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQQ06_RS24010 (PQQ06_24010) | 53912..54538 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQQ06_RS24015 (PQQ06_24015) | 54522..55439 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| PQQ06_RS24020 (PQQ06_24020) | 55439..56752 | + | 1314 | WP_274890352.1 | TrbI/VirB10 family protein | - |
| PQQ06_RS24025 (PQQ06_24025) | 56749..57327 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQQ06_RS24030 (PQQ06_24030) | 57331..57723 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQQ06_RS24035 (PQQ06_24035) | 58008..59270 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQQ06_RS24040 (PQQ06_24040) | 59594..60739 | + | 1146 | WP_000976514.1 | D-aminopeptidase | ARG |
| PQQ06_RS24045 (PQQ06_24045) | 60833..61366 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| PQQ06_RS24050 (PQQ06_24050) | 61363..61680 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQQ06_RS24055 (PQQ06_24055) | 62408..62863 | + | 456 | Protein_85 | DUF4165 domain-containing protein | - |
| PQQ06_RS24060 (PQQ06_24060) | 62918..63622 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ06_RS24065 (PQQ06_24065) | 63685..64388 | - | 704 | Protein_87 | IS6 family transposase IS15DI | Transposase |
| PQQ06_RS24070 (PQQ06_24070) | 64598..65587 | - | 990 | WP_001276635.1 | hypothetical protein | VF |
| PQQ06_RS24075 (PQQ06_24075) | 65584..65820 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| PQQ06_RS24080 (PQQ06_24080) | 65817..66182 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| PQQ06_RS24085 (PQQ06_24085) | 66294..66932 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| PQQ06_RS24090 (PQQ06_24090) | 66947..68632 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| PQQ06_RS24095 (PQQ06_24095) | 68704..68979 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| PQQ06_RS24100 (PQQ06_24100) | 68995..69345 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| PQQ06_RS24105 (PQQ06_24105) | 69417..69851 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| PQQ06_RS24110 (PQQ06_24110) | 69951..70955 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| PQQ06_RS24115 (PQQ06_24115) | 71232..71351 | + | 120 | Protein_97 | permease | - |
| PQQ06_RS24120 (PQQ06_24120) | 71361..71477 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| PQQ06_RS24125 (PQQ06_24125) | 71598..71972 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| PQQ06_RS24130 (PQQ06_24130) | 72086..72811 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| PQQ06_RS24135 (PQQ06_24135) | 73052..77197 | + | 4146 | WP_274898593.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ06_RS24140 (PQQ06_24140) | 77187..77609 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQQ06_RS24145 (PQQ06_24145) | 77780..78232 | + | 453 | Protein_103 | hypothetical protein | - |
| PQQ06_RS24150 (PQQ06_24150) | 78248..78850 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| PQQ06_RS24155 (PQQ06_24155) | 79120..79401 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQQ06_RS24160 (PQQ06_24160) | 79700..80236 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQQ06_RS24165 (PQQ06_24165) | 80239..81249 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQQ06_RS24170 (PQQ06_24170) | 81254..82123 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| PQQ06_RS24175 (PQQ06_24175) | 82120..82611 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQQ06_RS24180 (PQQ06_24180) | 82938..83813 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQQ06_RS24185 (PQQ06_24185) | 83975..85012 | + | 1038 | Protein_111 | DNA-binding protein | - |
| PQQ06_RS24190 (PQQ06_24190) | 85302..86813 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQQ06_RS24195 (PQQ06_24195) | 86924..87964 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQQ06_RS24200 (PQQ06_24200) | 87966..89399 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| PQQ06_RS24205 (PQQ06_24205) | 89412..93026 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQQ06_RS24210 (PQQ06_24210) | 93064..93426 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| PQQ06_RS24215 (PQQ06_24215) | 94142..94414 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQQ06_RS24220 (PQQ06_24220) | 94414..94947 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQQ06_RS24225 (PQQ06_24225) | 94958..95566 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQQ06_RS24230 (PQQ06_24230) | 95563..96113 | + | 551 | Protein_120 | FlhC family transcriptional regulator | - |
| PQQ06_RS24235 (PQQ06_24235) | 96173..96592 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQQ06_RS24240 (PQQ06_24240) | 96594..96887 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQQ06_RS24245 (PQQ06_24245) | 96904..97887 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQQ06_RS24250 (PQQ06_24250) | 98386..98925 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|