MGE detailed information
MGE type: Prophage MGE length: 9615 bp
Accession: NZ_CP117367 Location: 304477..314091 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Accession: NZ_CP117367 Location: 304477..314091 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ12_RS01370 (300028) | 300028..300882 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| PQQ12_RS01375 (301204) | 301204..302307 | + | 1104 | WP_001839269.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQQ12_RS01380 (302391) | 302391..302525 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQQ12_RS01385 (302503) | 302503..302886 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQQ12_RS01390 (303308) | 303308..304417 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQQ12_RS01395 (304477) | 304477..305403 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQQ12_RS01400 (305400) | 305400..306677 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQQ12_RS01405 (306674) | 306674..307441 | + | 768 | WP_001751764.1 | D-alanine--poly(phosphoribitol) ligase subunit 1 | VF |
| PQQ12_RS01410 (307443) | 307443..308156 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQQ12_RS01415 (308287) | 308287..308508 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ12_RS01420 (308505) | 308505..308873 | + | 369 | WP_001575091.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQQ12_RS01425 (309132) | 309132..310448 | + | 1317 | WP_000624752.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQQ12_RS01430 (310553) | 310553..311440 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQQ12_RS01435 (311437) | 311437..312282 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQQ12_RS01440 (312284) | 312284..313354 | + | 1071 | WP_000907846.1 | hypothetical protein | VF |
| PQQ12_RS01445 (313351) | 313351..314091 | + | 741 | WP_000073545.1 | glycerophosphodiester phosphodiesterase | - |
| PQQ12_RS01450 (314088) | 314088..314504 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQQ12_RS01455 (314630) | 314630..316372 | + | 1743 | WP_000805110.1 | gamma-glutamyltransferase | - |
| PQQ12_RS01460 (316417) | 316417..317451 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQQ12_RS01465 (317448) | 317448..318419 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|