MGE detailed information
MGE type: Genomic_island MGE length: 9920 bp
Accession: NZ_CP117365 Location: 834761..844680 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM089 Replicon: chromosome
Accession: NZ_CP117365 Location: 834761..844680 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP78_RS03995 (830207) | 830207..831305 | + | 1099 | WP_274891946.1 | peptide chain release factor 2 | - |
| PQP78_RS04000 (831315) | 831315..832832 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP78_RS04005 (832908) | 832908..833453 | - | 546 | WP_000133986.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP78_RS04010 (833718) | 833718..834476 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP78_RS04020 (834761) | 834761..835567 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| PQP78_RS04025 (835842) | 835842..836093 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PQP78_RS04030 (836270) | 836270..836497 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP78_RS04035 (836497) | 836497..836895 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP78_RS04040 (837703) | 837703..838239 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| PQP78_RS04045 (838286) | 838286..838918 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP78_RS04050 (839637) | 839637..840218 | + | 582 | WP_001244652.1 | putative fimbrial-like protein YbgD | VF |
| PQP78_RS04055 (840338) | 840338..842829 | + | 2492 | Protein_793 | Outer membrane usher protein PapC | VF |
| PQP78_RS04060 (842870) | 842870..843613 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| PQP78_RS04065 (843610) | 843610..844680 | + | 1071 | WP_000147758.1 | hypothetical protein | - |
| PQP78_RS04070 (844787) | 844787..845293 | + | 507 | WP_000093328.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP78_RS04075 (845280) | 845280..846038 | + | 759 | WP_000134800.1 | transcriptional regulator | - |
| PQP78_RS04080 (846248) | 846248..847072 | - | 825 | WP_000503695.1 | nickel/cobalt efflux protein RcnA | - |
| PQP78_RS04085 (847194) | 847194..847466 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP78_RS04090 (847497) | 847497..848726 | - | 1230 | WP_000036827.1 | amino acid permease | - |
| PQP78_RS04095 (848868) | 848868..849323 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|