MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117340 Location: 4191636..4194739 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM111 Replicon: chromosome
Accession: NZ_CP117340 Location: 4191636..4194739 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM111 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ02_RS20620 (4186925) | 4186925..4187371 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQQ02_RS20625 (4187368) | 4187368..4189812 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQQ02_RS20630 (4189829) | 4189829..4190569 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQQ02_RS20635 (4190691) | 4190691..4191221 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQQ02_RS20640 (4191544) | 4191544..4192677 | + | 1134 | Protein_4040 | IS3 family transposase | - |
| PQQ02_RS20645 (4192709) | 4192709..4192849 | - | 141 | Protein_4041 | Arm DNA-binding domain-containing protein | - |
| PQQ02_RS20650 (4193255) | 4193255..4193563 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQQ02_RS20655 (4193566) | 4193566..4193805 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQQ02_RS20660 (4193914) | 4193914..4194162 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQQ02_RS20665 (4194353) | 4194353..4194784 | - | 432 | Protein_4045 | IS630 family transposase ISEc33 | Transposase |
| PQQ02_RS20675 (4195541) | 4195541..4196560 | + | 1020 | WP_274891549.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQQ02_RS20680 (4196588) | 4196588..4197118 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQQ02_RS20685 (4197335) | 4197335..4198366 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQQ02_RS20690 (4198391) | 4198391..4199155 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|