MGE detailed information

MGE type: Conjugative plasmid        MGE length: 146580 bp
Accession: NZ_CP117339        Location: 1..146580         Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095       Replicon: plasmid pRM095_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PQP94_RS23795 (PQP94_23795) 1..1101 + 1101 WP_274895971.1 RepB family plasmid replication initiator protein -
PQP94_RS23800 (PQP94_23800) 2138..2572 - 435 WP_000883925.1 hypothetical protein -
PQP94_RS23805 (PQP94_23805) 2590..3705 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
PQP94_RS23810 (PQP94_23810) 3974..4582 + 609 WP_000849071.1 hypothetical protein -
PQP94_RS23815 (PQP94_23815) 4587..5108 + 522 WP_000393785.1 hypothetical protein -
PQP94_RS23820 (PQP94_23820) 5111..5632 + 522 WP_000805800.1 hypothetical protein -
PQP94_RS23825 (PQP94_23825) 5729..6202 + 474 WP_000057877.1 hypothetical protein -
PQP94_RS23830 (PQP94_23830) 6213..6506 + 294 WP_001370730.1 hypothetical protein -
PQP94_RS23835 (PQP94_23835) 6511..7365 + 855 WP_000539392.1 hypothetical protein -
PQP94_RS23840 (PQP94_23840) 7365..8324 + 960 WP_000829616.1 S49 family peptidase -
PQP94_RS23845 (PQP94_23845) 8340..9200 + 861 WP_000139698.1 DsbA family protein -
PQP94_RS23850 (PQP94_23850) 9234..9662 + 429 WP_000591074.1 hypothetical protein -
PQP94_RS23855 (PQP94_23855) 9719..10078 + 360 WP_000422768.1 hypothetical protein -
PQP94_RS23860 (PQP94_23860) 10078..10524 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
PQP94_RS23865 (PQP94_23865) 10521..11039 + 519 WP_000210756.1 nitrite reductase -
PQP94_RS23870 (PQP94_23870) 11039..11269 + 231 WP_000972663.1 hypothetical protein -
PQP94_RS23875 (PQP94_23875) 11256..12113 + 858 WP_001167032.1 hypothetical protein -
PQP94_RS23880 (PQP94_23880) 12344..12871 + 528 WP_001236377.1 thermonuclease family protein -
PQP94_RS23885 (PQP94_23885) 12929..13201 + 273 WP_001043047.1 HU family DNA-binding protein -
PQP94_RS23890 (PQP94_23890) 13289..13582 + 294 WP_001239997.1 chromosome segregation protein ParM -
PQP94_RS23895 (PQP94_23895) 13609..13911 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
PQP94_RS23900 (PQP94_23900) 13916..14266 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
PQP94_RS23905 (PQP94_23905) 14429..14977 + 549 WP_001061574.1 transcriptional regulator -
PQP94_RS23910 (PQP94_23910) 15318..15512 + 195 WP_000343597.1 hypothetical protein -
PQP94_RS23915 (PQP94_23915) 15523..15894 + 372 WP_000516916.1 hypothetical protein -
PQP94_RS23920 (PQP94_23920) 15887..16357 + 471 WP_001281821.1 hypothetical protein -
PQP94_RS23925 (PQP94_23925) 16372..16707 - 336 WP_000683476.1 hypothetical protein -
PQP94_RS23930 (PQP94_23930) 16804..17292 + 489 WP_001273096.1 DUF1643 domain-containing protein -
PQP94_RS23935 (PQP94_23935) 17295..17792 + 498 WP_000062185.1 hypothetical protein -
PQP94_RS23940 (PQP94_23940) 18007..18711 - 705 WP_274895970.1 IS6 family transposase IS26 Transposase
PQP94_RS23945 (PQP94_23945) 18776..18955 - 180 Protein_31 helix-turn-helix domain-containing protein -
PQP94_RS23950 (PQP94_23950) 19262..19966 + 705 WP_274895970.1 IS6 family transposase IS26 Transposase
PQP94_RS23955 (PQP94_23955) 19972..20112 + 141 WP_001044210.1 hypothetical protein -
PQP94_RS23960 (PQP94_23960) 20598..21335 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
PQP94_RS23965 (PQP94_23965) 21332..21556 + 225 WP_000743213.1 hypothetical protein -
PQP94_RS23970 (PQP94_23970) 21767..23260 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
PQP94_RS23975 (PQP94_23975) 23291..24175 + 885 WP_001447541.1 DUF3363 domain-containing protein -
PQP94_RS23980 (PQP94_23980) 24392..25606 + 1215 WP_000214123.1 Inner membrane transport protein YdhC ARG
PQP94_RS23985 (PQP94_23985) 25634..25939 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
PQP94_RS23990 (PQP94_23990) 26051..26239 + 189 Protein_40 IS91 family transposase -
PQP94_RS23995 (PQP94_23995) 26206..27405 - 1200 WP_274895972.1 Tetracycline resistance protein, class C ARG
PQP94_RS24000 (PQP94_24000) 27511..28161 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
PQP94_RS24005 (PQP94_24005) 28193..28435 - 243 WP_000844627.1 transposase -
PQP94_RS24010 (PQP94_24010) 28741..29577 - 837 WP_000480968.1 hypothetical protein ARG
PQP94_RS24015 (PQP94_24015) 29577..30380 - 804 WP_274895973.1 Aminoglycoside 3'-phosphotransferase ARG
PQP94_RS24020 (PQP94_24020) 30441..31256 - 816 WP_001043260.1 Dihydropteroate synthase ARG
PQP94_RS24025 (PQP94_24025) 31563..31874 + 312 WP_000338945.1 hypothetical protein -
PQP94_RS24030 (PQP94_24030) 32048..32833 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
PQP94_RS24035 (PQP94_24035) 32837..34018 + 1182 WP_001207227.1 KorB domain-containing protein -
PQP94_RS24040 (PQP94_24040) 34067..34339 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
PQP94_RS24045 (PQP94_24045) 34392..35027 - 636 WP_000074431.1 N-6 DNA methylase -
PQP94_RS24050 (PQP94_24050) 35119..35262 - 144 WP_000939033.1 hypothetical protein -
PQP94_RS24055 (PQP94_24055) 35589..35966 + 378 WP_001125904.1 hypothetical protein -
PQP94_RS24060 (PQP94_24060) 35959..36240 + 282 WP_000044823.1 hypothetical protein -
PQP94_RS24065 (PQP94_24065) 36215..36889 + 675 WP_000344149.1 hypothetical protein -
PQP94_RS24070 (PQP94_24070) 36882..37388 + 507 WP_000566443.1 hypothetical protein -
PQP94_RS24075 (PQP94_24075) 37394..37705 + 312 WP_001447539.1 hypothetical protein -
PQP94_RS24080 (PQP94_24080) 37714..38214 + 501 WP_274895974.1 hypothetical protein -
PQP94_RS24085 (PQP94_24085) 38218..39645 + 1428 WP_000936897.1 DNA cytosine methyltransferase -
PQP94_RS24090 (PQP94_24090) 39645..40301 + 657 WP_000268552.1 hypothetical protein -
PQP94_RS24095 (PQP94_24095) 40357..40974 + 618 WP_000464630.1 hypothetical protein -
PQP94_RS24100 (PQP94_24100) 41207..41485 + 279 WP_000746034.1 hypothetical protein -
PQP94_RS24105 (PQP94_24105) 41576..42064 - 489 WP_000467110.1 hypothetical protein -
PQP94_RS24110 (PQP94_24110) 42079..44271 - 2193 WP_000366823.1 DNA topoisomerase 3 -
PQP94_RS24115 (PQP94_24115) 44271..44504 - 234 WP_001191890.1 hypothetical protein -
PQP94_RS24120 (PQP94_24120) 44486..45103 - 618 WP_001249395.1 hypothetical protein -
PQP94_RS24125 (PQP94_24125) 45271..48243 + 2973 WP_001326173.1 hypothetical protein Relaxase
PQP94_RS24130 (PQP94_24130) 48240..50105 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
PQP94_RS24135 (PQP94_24135) 50155..50700 + 546 WP_000228720.1 hypothetical protein -
PQP94_RS24140 (PQP94_24140) 50657..51286 + 630 WP_000743449.1 DUF4400 domain-containing protein -
PQP94_RS24145 (PQP94_24145) 51296..51742 + 447 WP_274892029.1 hypothetical protein -
PQP94_RS24150 (PQP94_24150) 51752..52129 + 378 WP_000869297.1 hypothetical protein -
PQP94_RS24155 (PQP94_24155) 52129..52791 + 663 WP_001231464.1 hypothetical protein -
PQP94_RS24160 (PQP94_24160) 53127..53492 + 366 WP_001052530.1 hypothetical protein -
PQP94_RS24165 (PQP94_24165) 53637..53918 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
PQP94_RS24170 (PQP94_24170) 53915..54541 + 627 WP_001049717.1 TraE/TraK family type IV conjugative transfer system protein -
PQP94_RS24175 (PQP94_24175) 54525..55442 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
PQP94_RS24180 (PQP94_24180) 55442..56755 + 1314 WP_024131605.1 TraB/VirB10 family protein -
PQP94_RS24185 (PQP94_24185) 56752..57330 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
PQP94_RS24190 (PQP94_24190) 57334..57726 + 393 WP_000479535.1 TraA family conjugative transfer protein -
PQP94_RS24195 (PQP94_24195) 58011..59273 + 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
PQP94_RS24200 (PQP94_24200) 59597..60742 + 1146 WP_000976514.1 Beta-lactamase ARG
PQP94_RS24205 (PQP94_24205) 60836..61369 + 534 WP_001221666.1 lipocalin family protein -
PQP94_RS24210 (PQP94_24210) 61366..61683 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
PQP94_RS24215 (PQP94_24215) 62411..67897 + 5487 WP_000606835.1 Ig-like domain-containing protein -
PQP94_RS24220 (PQP94_24220) 68046..68753 + 708 WP_001259346.1 DsbC family protein -
PQP94_RS24225 (PQP94_24225) 68750..71197 + 2448 WP_000637384.1 type IV secretion system protein TraC -
PQP94_RS24230 (PQP94_24230) 71212..71529 + 318 WP_000351984.1 hypothetical protein -
PQP94_RS24235 (PQP94_24235) 71526..72056 + 531 WP_001010740.1 S26 family signal peptidase -
PQP94_RS24240 (PQP94_24240) 72019..73284 + 1266 WP_274895977.1 TrbC family F-type conjugative pilus assembly protein -
PQP94_RS24245 (PQP94_24245) 73281..73952 + 672 WP_274895978.1 EAL domain-containing protein -
PQP94_RS24250 (PQP94_24250) 73952..74956 + 1005 WP_005507569.1 TraU family protein -
PQP94_RS24255 (PQP94_24255) 75072..77867 + 2796 WP_001256484.1 conjugal transfer mating pair stabilization protein TraN -
PQP94_RS24260 (PQP94_24260) 77906..78766 - 861 WP_000709517.1 hypothetical protein -
PQP94_RS24265 (PQP94_24265) 78889..79530 - 642 WP_000796664.1 hypothetical protein -
PQP94_RS24270 (PQP94_24270) 79825..80145 + 321 WP_000547566.1 hypothetical protein -
PQP94_RS24275 (PQP94_24275) 80449..80634 + 186 WP_001186917.1 hypothetical protein -
PQP94_RS24280 (PQP94_24280) 80854..81822 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
PQP94_RS24285 (PQP94_24285) 81833..82741 + 909 WP_000739139.1 hypothetical protein -
PQP94_RS24290 (PQP94_24290) 82802..83332 + 531 WP_000987165.1 single-stranded DNA-binding protein -
PQP94_RS24295 (PQP94_24295) 83427..84416 + 990 WP_001282585.1 phage recombination protein Bet -
PQP94_RS24300 (PQP94_24300) 84479..85489 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
PQP94_RS24305 (PQP94_24305) 85689..86966 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
PQP94_RS24310 (PQP94_24310) 87051..88847 + 1797 WP_000039319.1 VWA domain-containing protein -
PQP94_RS24315 (PQP94_24315) 88909..89244 + 336 WP_001447572.1 hypothetical protein -
PQP94_RS24320 (PQP94_24320) 89509..90048 + 540 WP_000018872.1 hypothetical protein -
PQP94_RS24325 (PQP94_24325) 90139..90639 + 501 WP_000793769.1 hypothetical protein -
PQP94_RS24330 (PQP94_24330) 90713..91597 + 885 WP_000477209.1 hypothetical protein -
PQP94_RS24335 (PQP94_24335) 91663..91887 + 225 WP_001102700.1 class I ribonucleotide reductase maintenance protein YfaE -
PQP94_RS24340 (PQP94_24340) 91949..92338 + 390 WP_000026577.1 hypothetical protein -
PQP94_RS24345 (PQP94_24345) 92328..92780 + 453 WP_001176699.1 hypothetical protein -
PQP94_RS24350 (PQP94_24350) 93118..93309 + 192 WP_000651508.1 hypothetical protein -
PQP94_RS24355 (PQP94_24355) 93378..93731 + 354 WP_000994741.1 hypothetical protein -
PQP94_RS24360 (PQP94_24360) 93923..94267 + 345 WP_000209093.1 hypothetical protein -
PQP94_RS24365 (PQP94_24365) 94345..94647 + 303 WP_000410925.1 hypothetical protein -
PQP94_RS24370 (PQP94_24370) 94725..96350 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
PQP94_RS24375 (PQP94_24375) 96411..96842 + 432 WP_000687894.1 hypothetical protein -
PQP94_RS24380 (PQP94_24380) 96916..97470 + 555 WP_001093867.1 hypothetical protein -
PQP94_RS24385 (PQP94_24385) 97703..98089 + 387 WP_000042274.1 hypothetical protein -
PQP94_RS24390 (PQP94_24390) 98177..100630 + 2454 WP_001187969.1 phosphoadenosine phosphosulfate reductase -
PQP94_RS24395 (PQP94_24395) 100832..101035 + 204 WP_000050847.1 hypothetical protein -
PQP94_RS24400 (PQP94_24400) 101107..101712 + 606 WP_000071870.1 5'-deoxynucleotidase -
PQP94_RS24405 (PQP94_24405) 101705..101974 + 270 WP_000184110.1 hypothetical protein -
PQP94_RS24410 (PQP94_24410) 101988..102206 + 219 WP_000260293.1 hypothetical protein -
PQP94_RS24415 (PQP94_24415) 102280..102837 + 558 WP_274895969.1 pyruvate dehydrogenase -
PQP94_RS24420 (PQP94_24420) 102912..103763 + 852 WP_000595210.1 hypothetical protein -
PQP94_RS24425 (PQP94_24425) 104222..104608 + 387 WP_001077336.1 hypothetical protein -
PQP94_RS24430 (PQP94_24430) 104786..106513 + 1728 WP_000122922.1 toprim domain-containing protein -
PQP94_RS24435 (PQP94_24435) 106500..106778 + 279 WP_000268337.1 hypothetical protein -
PQP94_RS24440 (PQP94_24440) 106851..107071 + 221 Protein_130 hypothetical protein -
PQP94_RS24445 (PQP94_24445) 107253..108257 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
PQP94_RS24450 (PQP94_24450) 108336..110240 - 1905 Protein_132 Tn3 family transposase TnpA_TnAs3 Transposase
PQP94_RS24455 (PQP94_24455) 110296..111000 - 705 WP_274895970.1 IS6 family transposase IS26 Transposase
PQP94_RS24460 (PQP94_24460) 111063..111767 - 705 WP_274895970.1 IS6 family transposase IS26 Transposase
PQP94_RS24465 (PQP94_24465) 111977..112966 - 990 WP_001276635.1 putative signaling protein VF
PQP94_RS24470 (PQP94_24470) 112963..113199 - 237 WP_001087810.1 broad-spectrum mercury transporter MerE -
PQP94_RS24475 (PQP94_24475) 113196..113561 - 366 WP_000995361.1 mercury resistance co-regulator MerD -
PQP94_RS24480 (PQP94_24480) 113673..114311 - 639 WP_000761850.1 organomercurial lyase MerB -
PQP94_RS24485 (PQP94_24485) 114326..116011 - 1686 WP_000149288.1 mercury(II) reductase -
PQP94_RS24490 (PQP94_24490) 116083..116358 - 276 WP_000732290.1 mercury resistance system periplasmic binding protein MerP -
PQP94_RS24495 (PQP94_24495) 116374..116724 - 351 WP_001294666.1 mercuric transport protein MerT -
PQP94_RS24500 (PQP94_24500) 116796..117230 + 435 WP_000414383.1 IS607 family transposase ISChh1 Transposase
PQP94_RS24505 (PQP94_24505) 117330..118334 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
PQP94_RS24510 (PQP94_24510) 118611..118730 + 120 Protein_144 permease -
PQP94_RS24515 (PQP94_24515) 118740..118856 + 117 WP_000338626.1 hypothetical protein -
PQP94_RS24520 (PQP94_24520) 118977..119351 + 375 WP_000868820.1 hypothetical protein -
PQP94_RS24525 (PQP94_24525) 119465..120190 + 726 WP_000988731.1 hypothetical protein -
PQP94_RS24530 (PQP94_24530) 120431..124576 + 4146 WP_011872905.1 RHS repeat-associated core domain-containing protein -
PQP94_RS24535 (PQP94_24535) 124566..124988 + 423 WP_001165345.1 hypothetical protein -
PQP94_RS24540 (PQP94_24540) 125159..125611 + 453 Protein_150 hypothetical protein -
PQP94_RS24545 (PQP94_24545) 125627..126229 - 603 WP_274895980.1 hypothetical protein -
PQP94_RS24550 (PQP94_24550) 126499..126780 + 282 WP_000575657.1 hypothetical protein -
PQP94_RS24555 (PQP94_24555) 127079..127615 + 537 WP_000949433.1 hypothetical protein -
PQP94_RS24560 (PQP94_24560) 127618..128628 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
PQP94_RS24565 (PQP94_24565) 128633..129502 + 870 WP_000997323.1 3'-5' exonuclease -
PQP94_RS24570 (PQP94_24570) 129499..129990 + 492 WP_000139717.1 hypothetical protein -
PQP94_RS24575 (PQP94_24575) 130317..131192 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
PQP94_RS24580 (PQP94_24580) 131354..132394 + 1041 WP_000101568.1 DNA-binding protein -
PQP94_RS24585 (PQP94_24585) 132681..134192 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
PQP94_RS24590 (PQP94_24590) 134303..135343 + 1041 WP_001326396.1 conjugal transfer protein TraF -
PQP94_RS24595 (PQP94_24595) 135345..136778 + 1434 WP_000256129.1 conjugal transfer protein TraH -
PQP94_RS24600 (PQP94_24600) 136791..140405 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PQP94_RS24605 (PQP94_24605) 140443..140805 - 363 WP_000683483.1 hypothetical protein -
PQP94_RS24610 (PQP94_24610) 141521..141793 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
PQP94_RS24615 (PQP94_24615) 141793..142326 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
PQP94_RS24620 (PQP94_24620) 142337..142945 + 609 WP_000891157.1 hypothetical protein -
PQP94_RS24625 (PQP94_24625) 142942..143492 + 551 Protein_167 FlhC family transcriptional regulator -
PQP94_RS24630 (PQP94_24630) 143552..143971 - 420 WP_000651490.1 H-NS family nucleoid-associated regulatory protein -
PQP94_RS24635 (PQP94_24635) 143973..144266 - 294 WP_000919078.1 hypothetical protein -
PQP94_RS24640 (PQP94_24640) 144283..145266 - 984 WP_000077458.1 ParM/StbA family protein -
PQP94_RS24645 (PQP94_24645) 145765..146304 + 540 WP_001447712.1 conjugative transfer protein MobI(A/C) -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance