MGE detailed information
MGE type: Conjugative plasmid MGE length: 66452 bp
Accession: NZ_CP117333 Location: 1..66452 Organism: Salmonella enterica subsp. enterica serovar Muenster strain RM055 Replicon: plasmid pRM055_1
Accession: NZ_CP117333 Location: 1..66452 Organism: Salmonella enterica subsp. enterica serovar Muenster strain RM055 Replicon: plasmid pRM055_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP79_RS22775 (1) | 1..858 | + | 858 | WP_123000962.1 | incFII family plasmid replication initiator RepA | - |
| PQP79_RS22780 (1797) | 1797..2450 | + | 654 | WP_033560242.1 | CPBP family intramembrane metalloprotease | - |
| PQP79_RS22785 (2543) | 2543..2800 | + | 258 | WP_033560241.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PQP79_RS22790 (2733) | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PQP79_RS22795 (3419) | 3419..5191 | + | 1773 | WP_033560240.1 | DUF262 domain-containing protein | - |
| PQP79_RS22800 (5797) | 5797..6102 | + | 306 | WP_001152000.1 | hypothetical protein | - |
| PQP79_RS22805 (6113) | 6113..6347 | + | 235 | Protein_7 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PQP79_RS22810 (6475) | 6475..6756 | + | 282 | WP_096936245.1 | hypothetical protein | - |
| PQP79_RS22815 (6879) | 6879..7229 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| PQP79_RS22820 (7232) | 7232..8194 | - | 963 | WP_000959874.1 | plasmid segregation protein ParM | - |
| PQP79_RS22825 (8331) | 8331..8633 | + | 303 | WP_223737808.1 | hypothetical protein | - |
| PQP79_RS22830 (8710) | 8710..9393 | + | 684 | WP_096936280.1 | DNA methylase | - |
| PQP79_RS22835 (9394) | 9394..9615 | + | 222 | WP_001104891.1 | hypothetical protein | - |
| PQP79_RS22840 (9509) | 9509..10061 | + | 553 | Protein_14 | DUF1380 family protein | - |
| PQP79_RS22845 (10107) | 10107..10886 | + | 780 | WP_047659433.1 | hypothetical protein | - |
| PQP79_RS22850 (11303) | 11303..11728 | + | 426 | WP_047659429.1 | antirestriction protein | - |
| PQP79_RS22855 (11776) | 11776..12198 | + | 423 | WP_047659427.1 | DUF1380 family protein | - |
| PQP79_RS22860 (12195) | 12195..12386 | + | 192 | WP_023181017.1 | hypothetical protein | - |
| PQP79_RS22865 (12755) | 12755..12906 | - | 152 | Protein_19 | hypothetical protein | - |
| PQP79_RS22870 (13423) | 13423..13653 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PQP79_RS22875 (13705) | 13705..15066 | + | 1362 | WP_097178404.1 | DUF3560 domain-containing protein | - |
| PQP79_RS22880 (15114) | 15114..15677 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| PQP79_RS22885 (15703) | 15703..15939 | + | 237 | Protein_23 | hypothetical protein | - |
| PQP79_RS22890 (15828) | 15828..16109 | + | 282 | WP_072277694.1 | hypothetical protein | - |
| PQP79_RS22895 (16350) | 16350..16556 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| PQP79_RS22900 (16582) | 16582..17103 | + | 522 | WP_021553184.1 | single-stranded DNA-binding protein | - |
| PQP79_RS22905 (17161) | 17161..17394 | + | 234 | WP_021553185.1 | DUF905 domain-containing protein | - |
| PQP79_RS22910 (17458) | 17458..19422 | + | 1965 | WP_274881742.1 | ParB/RepB/Spo0J family partition protein | - |
| PQP79_RS22915 (19491) | 19491..19925 | + | 435 | WP_274881743.1 | conjugation system SOS inhibitor PsiB | - |
| PQP79_RS22920 (19922) | 19922..20684 | + | 763 | Protein_30 | plasmid SOS inhibition protein A | - |
| - (20653) | 20653..20877 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (20653) | 20653..20877 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (20653) | 20653..20877 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (20653) | 20653..20877 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| PQP79_RS22925 (20863) | 20863..21012 | + | 150 | Protein_31 | plasmid maintenance protein Mok | - |
| PQP79_RS22930 (20954) | 20954..21079 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PQP79_RS22935 (21314) | 21314..21673 | - | 360 | WP_024223173.1 | hypothetical protein | - |
| PQP79_RS22940 (21743) | 21743..22015 | + | 273 | WP_223724002.1 | single-stranded DNA-binding protein | - |
| PQP79_RS22945 (21969) | 21969..22292 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| PQP79_RS22950 (22351) | 22351..22593 | + | 243 | WP_000540591.1 | hypothetical protein | - |
| PQP79_RS22955 (22793) | 22793..23216 | - | 424 | Protein_37 | hypothetical protein | - |
| PQP79_RS22960 (23286) | 23286..23492 | + | 207 | WP_000547974.1 | hypothetical protein | - |
| PQP79_RS22965 (23516) | 23516..23812 | + | 297 | WP_021553188.1 | hypothetical protein | - |
| PQP79_RS22970 (23923) | 23923..24744 | + | 822 | WP_021553189.1 | DUF932 domain-containing protein | - |
| PQP79_RS22975 (25040) | 25040..25549 | - | 510 | WP_021553190.1 | hypothetical protein | VF |
| PQP79_RS22980 (25963) | 25963..26349 | + | 387 | WP_000124826.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PQP79_RS22985 (26538) | 26538..27227 | + | 690 | WP_000332474.1 | PAS domain-containing protein | - |
| PQP79_RS22990 (27315) | 27315..27542 | + | 228 | WP_096936277.1 | conjugal transfer relaxosome protein TraY | - |
| PQP79_RS22995 (27576) | 27576..27941 | + | 366 | WP_097178401.1 | type IV conjugative transfer system pilin TraA | - |
| PQP79_RS23000 (27956) | 27956..28267 | + | 312 | WP_097178400.1 | type IV conjugative transfer system protein TraL | - |
| PQP79_RS23005 (28289) | 28289..28855 | + | 567 | WP_021553195.1 | type IV conjugative transfer system protein TraE | - |
| PQP79_RS23010 (28842) | 28842..29570 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PQP79_RS23015 (29570) | 29570..31000 | + | 1431 | WP_097178399.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PQP79_RS23020 (30990) | 30990..31574 | + | 585 | WP_096936312.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PQP79_RS23025 (31561) | 31561..31881 | + | 321 | WP_001057302.1 | conjugal transfer protein TrbD | - |
| PQP79_RS23030 (31874) | 31874..32125 | + | 252 | WP_096936314.1 | conjugal transfer protein TrbG | - |
| PQP79_RS23035 (32122) | 32122..32637 | + | 516 | WP_097178398.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQP79_RS23040 (32772) | 32772..32993 | + | 222 | WP_097178397.1 | conjugal transfer protein TraR | - |
| PQP79_RS23045 (32986) | 32986..33459 | + | 474 | WP_097178396.1 | hypothetical protein | - |
| PQP79_RS23050 (33456) | 33456..33842 | + | 387 | WP_274881628.1 | hypothetical protein | - |
| PQP79_RS23055 (33922) | 33922..34170 | + | 249 | WP_097178395.1 | hypothetical protein | - |
| PQP79_RS23060 (34167) | 34167..34514 | + | 348 | WP_021553203.1 | hypothetical protein | - |
| PQP79_RS23065 (34645) | 34645..37275 | + | 2631 | WP_097178394.1 | type IV secretion system protein TraC | - |
| PQP79_RS23070 (37272) | 37272..37658 | + | 387 | WP_021553205.1 | type-F conjugative transfer system protein TrbI | - |
| PQP79_RS23075 (37655) | 37655..38287 | + | 633 | WP_021569944.1 | type-F conjugative transfer system protein TraW | - |
| PQP79_RS23080 (38284) | 38284..39276 | + | 993 | WP_000817325.1 | conjugal transfer pilus assembly protein TraU | - |
| PQP79_RS23085 (39303) | 39303..39635 | + | 333 | WP_021553224.1 | hypothetical protein | - |
| PQP79_RS23090 (39763) | 39763..40401 | + | 639 | WP_021553225.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PQP79_RS23095 (40398) | 40398..42248 | + | 1851 | WP_097231216.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PQP79_RS23100 (42275) | 42275..42532 | + | 258 | WP_063113354.1 | conjugal transfer protein TrbE | - |
| PQP79_RS23105 (42525) | 42525..43268 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PQP79_RS23110 (43282) | 43282..43647 | + | 366 | WP_021572669.1 | hypothetical protein | - |
| PQP79_RS23115 (43777) | 43777..44178 | + | 402 | WP_021572668.1 | hypothetical protein | - |
| PQP79_RS23120 (44245) | 44245..44526 | + | 282 | WP_000049684.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PQP79_RS23125 (44513) | 44513..45058 | + | 546 | WP_040084549.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PQP79_RS23130 (44988) | 44988..45335 | + | 348 | WP_097178392.1 | P-type conjugative transfer protein TrbJ | - |
| PQP79_RS23135 (45316) | 45316..45708 | + | 393 | WP_244578643.1 | F-type conjugal transfer protein TrbF | - |
| PQP79_RS23140 (45695) | 45695..47068 | + | 1374 | WP_123000941.1 | conjugal transfer pilus assembly protein TraH | - |
| PQP79_RS23145 (47065) | 47065..49911 | + | 2847 | WP_096936249.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PQP79_RS23150 (49908) | 49908..50417 | + | 510 | WP_096936248.1 | conjugal transfer entry exclusion protein TraS | - |
| PQP79_RS23155 (50431) | 50431..51162 | + | 732 | WP_089700085.1 | conjugal transfer complement resistance protein TraT | - |
| PQP79_RS23160 (51365) | 51365..52096 | + | 732 | WP_122997022.1 | hypothetical protein | - |
| PQP79_RS23165 (52152) | 52152..54413 | + | 2262 | WP_274881681.1 | type IV conjugative transfer system coupling protein TraD | - |
| PQP79_RS23170 (54413) | 54413..59683 | + | 5271 | WP_097178389.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| PQP79_RS23175 (59703) | 59703..60449 | + | 747 | WP_097178388.1 | conjugal transfer pilus acetylase TraX | - |
| PQP79_RS23180 (60504) | 60504..61064 | + | 561 | WP_021569950.1 | fertility inhibition protein FinO | - |
| PQP79_RS23185 (61845) | 61845..63434 | + | 1590 | WP_244578662.1 | YadA C-terminal domain-containing protein | - |
| PQP79_RS23190 (63436) | 63436..63897 | + | 462 | WP_021553165.1 | thermonuclease family protein | - |
| PQP79_RS23195 (63943) | 63943..64152 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| PQP79_RS23200 (64190) | 64190..64876 | + | 687 | WP_097178542.1 | DUF2726 domain-containing protein | - |
| PQP79_RS23205 (64873) | 64873..65181 | + | 309 | WP_096936303.1 | hypothetical protein | - |
| - (65356) | 65356..65410 | - | 55 | NuclAT_1 | - | Antitoxin Detail |
| - (65356) | 65356..65410 | - | 55 | NuclAT_1 | - | Antitoxin Detail |
| - (65356) | 65356..65410 | - | 55 | NuclAT_1 | - | Antitoxin Detail |
| - (65356) | 65356..65410 | - | 55 | NuclAT_1 | - | Antitoxin Detail |
| PQP79_RS23210 (65460) | 65460..65609 | + | 150 | WP_064764570.1 | Hok/Gef family protein | Toxin Detail |
| PQP79_RS23215 (65893) | 65893..66147 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|