MGE detailed information
MGE type: Prophage MGE length: 8693 bp
Accession: NZ_CP117327 Location: 313510..322202 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: chromosome
Accession: NZ_CP117327 Location: 313510..322202 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP95_RS01415 (309315) | 309315..310418 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQP95_RS01420 (310501) | 310501..310635 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQP95_RS01425 (310613) | 310613..310996 | - | 384 | WP_023137707.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQP95_RS01430 (311418) | 311418..312527 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQP95_RS01435 (312587) | 312587..313513 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQP95_RS01440 (313510) | 313510..314787 | + | 1278 | WP_274879228.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQP95_RS01445 (314784) | 314784..315551 | + | 768 | WP_000082080.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PQP95_RS01450 (315553) | 315553..316266 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQP95_RS01455 (316398) | 316398..316619 | + | 222 | WP_001599562.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP95_RS01460 (316616) | 316616..316984 | + | 369 | WP_000174965.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQP95_RS01465 (317243) | 317243..318559 | + | 1317 | Protein_288 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQP95_RS01470 (318664) | 318664..319551 | + | 888 | WP_000094074.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQP95_RS01475 (319548) | 319548..320393 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQP95_RS01480 (320395) | 320395..321465 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PQP95_RS01485 (321462) | 321462..322202 | + | 741 | WP_274891275.1 | glycerophosphodiester phosphodiesterase | - |
| PQP95_RS01490 (322215) | 322215..322631 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQP95_RS01495 (322757) | 322757..324499 | + | 1743 | WP_023205926.1 | gamma-glutamyltransferase | - |
| PQP95_RS01500 (324544) | 324544..325578 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQP95_RS01505 (325575) | 325575..326546 | - | 972 | WP_001038954.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.007 |