MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP117291        Location: 4113942..4246858         Organism: Salmonella enterica subsp. enterica serovar Typhi strain S5       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PRW97_RS20230 (PRW97_20230) 4109741..4111042 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PRW97_RS20235 (PRW97_20235) 4111163..4111510 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PRW97_RS20240 (PRW97_20240) 4111486..4113189 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PRW97_RS20245 (PRW97_20245) 4113226..4113801 + 576 WP_001188506.1 transcriptional regulator -
PRW97_RS20255 (PRW97_20255) 4114152..4115411 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PRW97_RS20260 (PRW97_20260) 4115722..4117005 + 1284 WP_000975154.1 SH3 domain-containing protein -
PRW97_RS20265 (PRW97_20265) 4117090..4117359 + 270 Protein_3970 integrase -
PRW97_RS20270 (PRW97_20270) 4117986..4118768 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PRW97_RS20275 (PRW97_20275) 4119038..4119232 + 195 WP_162009227.1 hypothetical protein -
PRW97_RS20280 (PRW97_20280) 4119625..4119846 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PRW97_RS20285 (PRW97_20285) 4119843..4120304 - 462 WP_000246267.1 hypothetical protein -
PRW97_RS20290 (PRW97_20290) 4120851..4122524 + 1674 WP_010989301.1 hypothetical protein -
PRW97_RS20295 (PRW97_20295) 4122605..4124890 + 2286 WP_010989300.1 hypothetical protein -
PRW97_RS20300 (PRW97_20300) 4125194..4125445 + 252 WP_024131240.1 hypothetical protein -
PRW97_RS20305 (PRW97_20305) 4125527..4125979 + 453 WP_000434168.1 hypothetical protein -
PRW97_RS20310 (PRW97_20310) 4126159..4126647 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PRW97_RS20315 (PRW97_20315) 4126644..4126937 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PRW97_RS20320 (PRW97_20320) 4127364..4128377 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW97_RS20325 (PRW97_20325) 4128541..4130130 - 1590 WP_000488995.1 TraI domain-containing protein -
PRW97_RS20330 (PRW97_20330) 4130114..4131625 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PRW97_RS20335 (PRW97_20335) 4132479..4133018 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PRW97_RS20340 (PRW97_20340) 4133263..4134540 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PRW97_RS20345 (PRW97_20345) 4134543..4135589 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PRW97_RS20350 (PRW97_20350) 4135613..4138108 + 2496 WP_010989299.1 hypothetical protein VF
PRW97_RS20355 (PRW97_20355) 4138108..4139844 + 1737 WP_000632616.1 hypothetical protein VF
PRW97_RS20360 (PRW97_20360) 4139889..4140956 + 1068 WP_000720235.1 hypothetical protein VF
PRW97_RS20365 (PRW97_20365) 4140966..4141760 + 795 WP_001023498.1 hypothetical protein VF
PRW97_RS20370 (PRW97_20370) 4141786..4142481 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PRW97_RS20375 (PRW97_20375) 4142504..4143808 + 1305 WP_000431675.1 hypothetical protein VF
PRW97_RS20380 (PRW97_20380) 4143828..4145798 + 1971 WP_000052242.1 hypothetical protein VF
PRW97_RS20385 (PRW97_20385) 4146100..4146846 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PRW97_RS20390 (PRW97_20390) 4146846..4147736 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PRW97_RS20395 (PRW97_20395) 4147747..4148004 - 258 WP_001681810.1 YjhX family toxin -
PRW97_RS20400 (PRW97_20400) 4148306..4148416 - 111 Protein_3997 autoinducer 2 ABC transporter substrate-binding protein -
PRW97_RS20405 (PRW97_20405) 4148651..4148995 + 345 Protein_3998 translesion error-prone DNA polymerase V autoproteolytic subunit -
PRW97_RS20410 (PRW97_20410) 4149111..4150136 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW97_RS20415 (PRW97_20415) 4150140..4150772 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PRW97_RS20420 (PRW97_20420) 4150889..4151131 + 243 WP_000102106.1 Rha family transcriptional regulator -
PRW97_RS20425 (PRW97_20425) 4151164..4151673 + 510 WP_000460852.1 phage regulatory CII family protein -
PRW97_RS20430 (PRW97_20430) 4151681..4151881 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PRW97_RS20435 (PRW97_20435) 4151845..4152186 + 342 WP_000963478.1 DUF5347 domain-containing protein -
PRW97_RS20440 (PRW97_20440) 4152254..4152487 + 234 WP_001244240.1 DUF2732 family protein -
PRW97_RS20445 (PRW97_20445) 4152487..4152714 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PRW97_RS20450 (PRW97_20450) 4152711..4153295 + 585 WP_001090717.1 exonuclease domain-containing protein -
PRW97_RS20455 (PRW97_20455) 4153292..4154152 + 861 WP_000104130.1 DNA adenine methylase -
PRW97_RS20460 (PRW97_20460) 4154143..4156551 + 2409 WP_000301193.1 replication endonuclease -
PRW97_RS20465 (PRW97_20465) 4156719..4156907 + 189 WP_001154438.1 hypothetical protein -
PRW97_RS20470 (PRW97_20470) 4156919..4157152 + 234 WP_001217561.1 DinI family protein -
PRW97_RS20475 (PRW97_20475) 4157248..4157466 + 219 WP_000835188.1 hypothetical protein -
PRW97_RS20480 (PRW97_20480) 4157476..4158540 + 1065 WP_000829584.1 hypothetical protein -
PRW97_RS20485 (PRW97_20485) 4158537..4159601 + 1065 WP_000789323.1 hypothetical protein -
PRW97_RS20490 (PRW97_20490) 4159621..4160316 + 696 WP_000080839.1 hypothetical protein -
PRW97_RS20495 (PRW97_20495) 4160365..4161408 - 1044 WP_001681813.1 phage portal protein -
PRW97_RS20500 (PRW97_20500) 4161408..4163174 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PRW97_RS20505 (PRW97_20505) 4163317..4164150 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
PRW97_RS20510 (PRW97_20510) 4164167..4165231 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PRW97_RS20515 (PRW97_20515) 4165235..4165885 + 651 WP_000059175.1 terminase endonuclease subunit -
PRW97_RS20520 (PRW97_20520) 4165979..4166443 + 465 WP_000673540.1 head completion/stabilization protein -
PRW97_RS20525 (PRW97_20525) 4166443..4166646 + 204 WP_000868184.1 tail protein X -
PRW97_RS20530 (PRW97_20530) 4166650..4166865 + 216 WP_000171566.1 HP1 family phage holin -
PRW97_RS20535 (PRW97_20535) 4166846..4167355 + 510 WP_001097942.1 lysozyme -
PRW97_RS20540 (PRW97_20540) 4167360..4167737 + 378 WP_000731034.1 DNZ54_00345 family protein -
PRW97_RS20545 (PRW97_20545) 4167734..4168162 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PRW97_RS20550 (PRW97_20550) 4168047..4168295 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PRW97_RS20555 (PRW97_20555) 4168258..4168689 + 432 WP_001039961.1 phage tail protein -
PRW97_RS20560 (PRW97_20560) 4168682..4169128 + 447 WP_000343944.1 phage virion morphogenesis protein -
PRW97_RS20565 (PRW97_20565) 4169197..4169775 + 579 WP_000993749.1 phage baseplate assembly protein V -
PRW97_RS20570 (PRW97_20570) 4169772..4170131 + 360 WP_000177408.1 GPW/gp25 family protein -
PRW97_RS20575 (PRW97_20575) 4170118..4171026 + 909 WP_000268327.1 baseplate assembly protein -
PRW97_RS20580 (PRW97_20580) 4171019..4171624 + 606 WP_001086816.1 phage tail protein I -
PRW97_RS20585 (PRW97_20585) 4171621..4173240 + 1620 WP_000104806.1 phage tail protein -
PRW97_RS20590 (PRW97_20590) 4173247..4173654 + 408 WP_000006337.1 tail fiber assembly protein -
PRW97_RS20595 (PRW97_20595) 4173852..4174574 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PRW97_RS20600 (PRW97_20600) 4174785..4175006 + 222 Protein_4037 helix-turn-helix domain-containing protein -
PRW97_RS20605 (PRW97_20605) 4175109..4176281 + 1173 WP_000046101.1 phage tail sheath protein -
PRW97_RS20610 (PRW97_20610) 4176291..4176806 + 516 WP_001207653.1 phage major tail tube protein -
PRW97_RS20615 (PRW97_20615) 4176861..4177163 + 303 WP_001280965.1 phage tail assembly protein -
PRW97_RS20620 (PRW97_20620) 4177178..4177297 + 120 WP_000763315.1 GpE family phage tail protein -
PRW97_RS20625 (PRW97_20625) 4177290..4180070 + 2781 WP_001282813.1 phage tail tape measure protein -
PRW97_RS20630 (PRW97_20630) 4180070..4180555 + 486 WP_000980405.1 phage tail protein -
PRW97_RS20635 (PRW97_20635) 4180552..4181652 + 1101 WP_001011750.1 phage late control D family protein -
PRW97_RS20640 (PRW97_20640) 4181720..4181938 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PRW97_RS20645 (PRW97_20645) 4182025..4182402 - 378 WP_001039750.1 hypothetical protein -
PRW97_RS20650 (PRW97_20650) 4182536..4182622 + 87 Protein_4047 peptidase -
PRW97_RS20655 (PRW97_20655) 4182622..4183896 + 1275 WP_000457555.1 Y-family DNA polymerase -
PRW97_RS20660 (PRW97_20660) 4184028..4184297 + 270 WP_001222413.1 hypothetical protein -
PRW97_RS20665 (PRW97_20665) 4184397..4184723 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PRW97_RS20670 (PRW97_20670) 4184798..4185697 - 900 WP_000022217.1 hypothetical protein -
PRW97_RS20675 (PRW97_20675) 4185771..4186679 - 909 WP_000881183.1 hypothetical protein -
PRW97_RS20680 (PRW97_20680) 4186751..4188700 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PRW97_RS20685 (PRW97_20685) 4188789..4189247 - 459 WP_000115421.1 hypothetical protein -
PRW97_RS20690 (PRW97_20690) 4189325..4189621 - 297 WP_000968700.1 hypothetical protein -
PRW97_RS20695 (PRW97_20695) 4189618..4190070 - 453 WP_000979718.1 hypothetical protein -
PRW97_RS20700 (PRW97_20700) 4190088..4190297 - 210 WP_000018145.1 hypothetical protein -
PRW97_RS20705 (PRW97_20705) 4190668..4191048 - 381 WP_001103837.1 hypothetical protein -
PRW97_RS20710 (PRW97_20710) 4191144..4191446 - 303 WP_001020123.1 hypothetical protein -
PRW97_RS20715 (PRW97_20715) 4192170..4193090 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PRW97_RS20720 (PRW97_20720) 4194356..4194898 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PRW97_RS20725 (PRW97_20725) 4195109..4195750 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PRW97_RS20730 (PRW97_20730) 4195735..4196982 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PRW97_RS20735 (PRW97_20735) 4197270..4197629 + 360 WP_010989293.1 hypothetical protein -
PRW97_RS20740 (PRW97_20740) 4197853..4198242 + 390 WP_000993574.1 hypothetical protein -
PRW97_RS20745 (PRW97_20745) 4198278..4199783 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PRW97_RS20750 (PRW97_20750) 4200116..4201513 - 1398 WP_014341560.1 integrating conjugative element protein -
PRW97_RS20755 (PRW97_20755) 4201561..4202529 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PRW97_RS20760 (PRW97_20760) 4202526..4202918 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PRW97_RS20765 (PRW97_20765) 4203073..4203459 - 387 WP_000054770.1 hypothetical protein -
PRW97_RS20770 (PRW97_20770) 4203614..4206330 - 2717 Protein_4071 conjugative transfer ATPase -
PRW97_RS20775 (PRW97_20775) 4206450..4206899 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PRW97_RS20780 (PRW97_20780) 4206886..4208364 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PRW97_RS20785 (PRW97_20785) 4208354..4209253 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PRW97_RS20790 (PRW97_20790) 4209253..4209906 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PRW97_RS20795 (PRW97_20795) 4209903..4210277 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PRW97_RS20800 (PRW97_20800) 4210287..4210652 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PRW97_RS20805 (PRW97_20805) 4210679..4210912 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PRW97_RS20810 (PRW97_20810) 4210918..4211172 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PRW97_RS20815 (PRW97_20815) 4211409..4212167 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PRW97_RS20820 (PRW97_20820) 4212164..4214254 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PRW97_RS20825 (PRW97_20825) 4214274..4214843 - 570 WP_000626967.1 restriction endonuclease -
PRW97_RS20830 (PRW97_20830) 4214853..4215353 - 501 WP_000253629.1 integrating conjugative element protein -
PRW97_RS20835 (PRW97_20835) 4215389..4216075 - 687 WP_000013624.1 hypothetical protein VF
PRW97_RS20840 (PRW97_20840) 4216054..4216740 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PRW97_RS20845 (PRW97_20845) 4216813..4217727 - 915 WP_000214158.1 hypothetical protein -
PRW97_RS20850 (PRW97_20850) 4217684..4218046 - 363 WP_001149494.1 hypothetical protein -
PRW97_RS20855 (PRW97_20855) 4218234..4219109 - 876 WP_000994659.1 hypothetical protein -
PRW97_RS20860 (PRW97_20860) 4219321..4219788 - 468 WP_000455463.1 hypothetical protein -
PRW97_RS20865 (PRW97_20865) 4219885..4221036 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW97_RS20870 (PRW97_20870) 4221384..4222691 - 1308 WP_000744276.1 hypothetical protein VF
PRW97_RS20875 (PRW97_20875) 4222688..4223350 - 663 WP_000218698.1 hypothetical protein VF
PRW97_RS20880 (PRW97_20880) 4223347..4223790 - 444 WP_223228896.1 hypothetical protein VF
PRW97_RS20885 (PRW97_20885) 4223833..4224429 - 597 WP_024131234.1 hypothetical protein VF
PRW97_RS20890 (PRW97_20890) 4224468..4225553 - 1086 WP_000074784.1 hypothetical protein VF
PRW97_RS20895 (PRW97_20895) 4225550..4227265 - 1716 WP_001289222.1 hypothetical protein VF
PRW97_RS20900 (PRW97_20900) 4227275..4227655 - 381 WP_014341558.1 hypothetical protein VF
PRW97_RS20905 (PRW97_20905) 4227843..4229129 - 1287 WP_057514394.1 hypothetical protein VF
PRW97_RS20910 (PRW97_20910) 4229131..4229469 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PRW97_RS20915 (PRW97_20915) 4229435..4230370 - 936 WP_049783585.1 hypothetical protein VF
PRW97_RS20920 (PRW97_20920) 4230841..4231260 - 420 WP_000539682.1 hypothetical protein VF
PRW97_RS20925 (PRW97_20925) 4231263..4232507 - 1245 WP_001095932.1 hypothetical protein VF
PRW97_RS20930 (PRW97_20930) 4232672..4233622 - 951 Protein_4103 ISNCY family transposase ISPlu22 VF
PRW97_RS20935 (PRW97_20935) 4233688..4234224 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PRW97_RS20940 (PRW97_20940) 4234237..4234455 - 219 WP_000958171.1 hypothetical protein -
PRW97_RS20945 (PRW97_20945) 4234536..4234985 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PRW97_RS20950 (PRW97_20950) 4235653..4237647 - 1995 WP_001241572.1 DNA topoisomerase III -
PRW97_RS20955 (PRW97_20955) 4237758..4238534 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PRW97_RS20960 (PRW97_20960) 4239123..4240433 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PRW97_RS20965 (PRW97_20965) 4240463..4240711 - 249 WP_000377625.1 hypothetical protein -
PRW97_RS20970 (PRW97_20970) 4240711..4241268 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PRW97_RS20975 (PRW97_20975) 4241353..4242075 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PRW97_RS20980 (PRW97_20980) 4242062..4242322 - 261 WP_000838568.1 hypothetical protein -
PRW97_RS20985 (PRW97_20985) 4242536..4244335 - 1800 WP_001029724.1 ParB family protein -
PRW97_RS20990 (PRW97_20990) 4244328..4245692 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PRW97_RS20995 (PRW97_20995) 4245689..4246723 - 1035 WP_001195363.1 hypothetical protein VF
PRW97_RS21000 (PRW97_21000) 4246937..4247011 - 75 Protein_4117 helix-turn-helix domain-containing protein -
PRW97_RS21005 (PRW97_21005) 4247391..4247468 + 78 Protein_4118 porin family protein -
PRW97_RS21010 (PRW97_21010) 4247568..4248320 + 753 WP_001785756.1 non-specific acid phosphatase -
PRW97_RS21015 (PRW97_21015) 4248561..4249052 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PRW97_RS21020 (PRW97_21020) 4249049..4249342 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PRW97_RS21025 (PRW97_21025) 4249659..4249881 + 223 Protein_4122 hypothetical protein -
PRW97_RS21030 (PRW97_21030) 4250147..4251022 + 876 WP_000921674.1 AraC family transcriptional regulator -
PRW97_RS21035 (PRW97_21035) 4251019..4251306 + 288 WP_001269916.1 transcriptional regulator RtsB -
PRW97_RS21040 (PRW97_21040) 4251329..4251545 + 217 Protein_4125 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance