MGE detailed information
MGE type: Genomic_island MGE length: 26913 bp
Accession: NZ_CP117235 Location: 4408022..4434934 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Accession: NZ_CP117235 Location: 4408022..4434934 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ28_RS21705 (4403480) | 4403480..4404595 | - | 1116 | WP_001022015.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| PQQ28_RS21710 (4404605) | 4404605..4405864 | - | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
| PQQ28_RS21715 (4406664) | 4406664..4407601 | + | 938 | Protein_4183 | glycosyltransferase | - |
| PQQ28_RS21720 (4408022) | 4408022..4408588 | + | 567 | Protein_4184 | restriction endonuclease | - |
| PQQ28_RS21725 (4408662) | 4408662..4409831 | + | 1170 | Protein_4185 | IS3 family transposase ISEc52 | Transposase |
| PQQ28_RS21730 (4409839) | 4409839..4411350 | + | 1512 | Protein_4186 | AAA family ATPase | - |
| PQQ28_RS21735 (4411343) | 4411343..4412629 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| PQQ28_RS21740 (4412739) | 4412739..4414478 | + | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| PQQ28_RS21745 (4414491) | 4414491..4415681 | - | 1191 | WP_001295727.1 | DNA (cytosine-5-)-methyltransferase | - |
| PQQ28_RS21750 (4415674) | 4415674..4417296 | - | 1623 | WP_001295726.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| PQQ28_RS21755 (4418087) | 4418087..4418263 | - | 177 | Protein_4191 | IS3 family transposase ISSen1 | Transposase |
| PQQ28_RS21760 (4418630) | 4418630..4418779 | - | 150 | Protein_4192 | hypothetical protein | - |
| PQQ28_RS21765 (4418885) | 4418885..4419061 | - | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| PQQ28_RS21770 (4419078) | 4419078..4419566 | - | 489 | WP_000761690.1 | DUF5983 family protein | - |
| PQQ28_RS21775 (4419563) | 4419563..4419940 | - | 378 | WP_000854759.1 | TA system toxin CbtA family protein | Toxin Detail |
| PQQ28_RS21780 (4420030) | 4420030..4420398 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PQQ28_RS21785 (4420561) | 4420561..4420782 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| PQQ28_RS21790 (4420845) | 4420845..4421321 | - | 477 | WP_001186775.1 | RadC family protein | - |
| PQQ28_RS21795 (4421337) | 4421337..4421810 | - | 474 | WP_001350782.1 | antirestriction protein | - |
| PQQ28_RS21800 (4422152) | 4422152..4422970 | - | 819 | WP_001234738.1 | DUF932 domain-containing protein | - |
| PQQ28_RS21805 (4423088) | 4423088..4423283 | - | 196 | Protein_4201 | DUF905 family protein | - |
| PQQ28_RS21810 (4423354) | 4423354..4426200 | - | 2847 | WP_001546341.1 | Ag43/Cah family autotransporter adhesin | - |
| PQQ28_RS21815 (4426572) | 4426572..4427444 | - | 873 | WP_001069743.1 | GTPase family protein | - |
| PQQ28_RS21820 (4427529) | 4427529..4428446 | - | 918 | WP_000250228.1 | hypothetical protein | - |
| PQQ28_RS21825 (4429646) | 4429646..4430248 | - | 603 | WP_000813435.1 | hypothetical protein | - |
| PQQ28_RS21830 (4430344) | 4430344..4430550 | - | 207 | WP_000211308.1 | helix-turn-helix domain-containing protein | - |
| PQQ28_RS21835 (4431324) | 4431324..4431473 | + | 150 | WP_071526287.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| PQQ28_RS21840 (4431806) | 4431806..4432003 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| PQQ28_RS21845 (4432203) | 4432203..4432772 | + | 570 | WP_000221530.1 | inovirus Gp2 family protein | - |
| PQQ28_RS21850 (4433032) | 4433032..4433433 | + | 402 | WP_000270962.1 | putative zinc ribbon protein | - |
| PQQ28_RS21855 (4433421) | 4433421..4433855 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| PQQ28_RS21860 (4434210) | 4434210..4434590 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| PQQ28_RS21865 (4434587) | 4434587..4434934 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| PQQ28_RS21870 (4434984) | 4434984..4436369 | + | 1386 | WP_000998019.1 | IS66 family transposase | - |
| PQQ28_RS21875 (4436608) | 4436608..4437966 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| PQQ28_RS21880 (4438248) | 4438248..4438379 | + | 132 | Protein_4216 | IS3 family transposase | - |
| PQQ28_RS21885 (4438539) | 4438539..4439236 | - | 698 | Protein_4217 | IS1 family transposase | - |
| PQQ28_RS21890 (4439323) | 4439323..4439391 | - | 69 | WP_211180522.1 | protein YkiE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|