MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 181261 bp
Accession: NZ_CP117008        Location: 712638..893898         Organism: Escherichia coli strain MLI109       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NL412_RS04205 (710129) 710129..711562 + 1434 WP_000869178.1 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE -
NL412_RS04210 (711682) 711682..711741 - 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
- (711642) 711642..711783 + 142 NuclAT_2 - -
- (711642) 711642..711783 + 142 NuclAT_2 - -
- (711642) 711642..711783 + 142 NuclAT_2 - -
- (711642) 711642..711783 + 142 NuclAT_2 - -
- (711642) 711642..711783 + 142 NuclAT_7 - -
- (711642) 711642..711783 + 142 NuclAT_7 - -
- (711642) 711642..711783 + 142 NuclAT_7 - -
- (711642) 711642..711783 + 142 NuclAT_7 - -
NL412_RS04215 (712058) 712058..712117 - 60 WP_100249717.1 type I toxin-antitoxin system Ibs family toxin -
- (712018) 712018..712159 + 142 NuclAT_3 - -
- (712018) 712018..712159 + 142 NuclAT_3 - -
- (712018) 712018..712159 + 142 NuclAT_3 - -
- (712018) 712018..712159 + 142 NuclAT_3 - -
- (712018) 712018..712159 + 142 NuclAT_6 - -
- (712018) 712018..712159 + 142 NuclAT_6 - -
- (712018) 712018..712159 + 142 NuclAT_6 - -
- (712018) 712018..712159 + 142 NuclAT_6 - -
NL412_RS04220 (712356) 712356..714017 - 1662 WP_001551668.1 flotillin family protein -
NL412_RS04225 (714044) 714044..714673 - 630 WP_001551667.1 DUF1449 family protein -
NL412_RS04230 (714943) 714943..715143 + 201 WP_001296424.1 cell surface composition regulator GlgS -
NL412_RS04235 (715178) 715178..715477 - 300 WP_001298379.1 ubiquinone biosynthesis accessory factor UbiK -
NL412_RS04240 (715851) 715851..716504 + 654 WP_001551665.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
NL412_RS04245 (716766) 716766..716936 + 171 WP_000469266.1 protein YqiD -
NL412_RS04250 (716994) 716994..717767 - 774 WP_001295627.1 zinc transporter ZupT -
NL412_RS04255 (717910) 717910..718698 + 789 WP_001445835.1 4,5-DOPA dioxygenase extradiol -
NL412_RS04260 (718744) 718744..719415 - 672 WP_000511501.1 protein-disulfide oxidoreductase DsbI -
NL412_RS04265 (719430) 719430..720098 - 669 WP_000040021.1 thiol:disulfide interchange protein DsbA/DsbL -
NL412_RS04270 (720116) 720116..721912 - 1797 WP_001551664.1 aryl-sulfate sulfotransferase -
NL412_RS04275 (722397) 722397..723557 - 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
NL412_RS04280 (723563) 723563..724234 - 672 WP_000831543.1 DUF1190 family protein -
NL412_RS04285 (724382) 724382..725863 - 1482 WP_000735278.1 outer membrane channel protein TolC -
NL412_RS04290 (726068) 726068..726697 + 630 WP_000917117.1 ADP-ribose diphosphatase -
NL412_RS04295 (726698) 726698..727120 + 423 WP_000833393.1 DUF1249 family protein -
NL412_RS04300 (727145) 727145..727972 + 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
NL412_RS04305 (727972) 727972..728553 + 582 WP_001551663.1 esterase YqiA -
NL412_RS04310 (728582) 728582..730474 + 1893 WP_000195296.1 DNA topoisomerase IV subunit B -
NL412_RS04315 (730538) 730538..732679 - 2142 WP_001551661.1 TonB-dependent siderophore receptor -
NL412_RS04320 (733053) 733053..733862 + 810 WP_000940876.1 hypothetical protein VF
NL412_RS04325 (733859) 733859..734842 + 984 WP_001551660.1 hypothetical protein VF
NL412_RS04330 (734851) 734851..735888 + 1038 WP_001490512.1 hypothetical protein VF
NL412_RS04335 (735899) 735899..736846 + 948 WP_001305988.1 iron-siderophore ABC transporter substrate-binding protein -
NL412_RS04340 (736843) 736843..737730 + 888 WP_000614953.1 MurR/RpiR family transcriptional regulator -
NL412_RS04345 (737775) 737775..738089 - 315 WP_000958598.1 putative quinol monooxygenase -
NL412_RS04350 (738120) 738120..738701 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
NL412_RS04355 (739059) 739059..739388 + 330 WP_001551659.1 DUF2645 family protein -
NL412_RS04360 (739437) 739437..740786 - 1350 WP_001551658.1 quorum sensing histidine kinase QseC -
NL412_RS04365 (740783) 740783..741442 - 660 WP_001221493.1 hypothetical protein VF
NL412_RS04370 (741594) 741594..741986 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
NL412_RS04375 (742039) 742039..742521 + 483 WP_000183492.1 GyrI-like domain-containing protein -
NL412_RS04380 (742630) 742630..744237 + 1608 WP_001551657.1 ABC transporter substrate-binding protein -
NL412_RS04385 (744375) 744375..746633 + 2259 WP_001551656.1 DNA topoisomerase IV subunit A -
NL412_RS04390 (746867) 746867..747604 + 738 WP_000965711.1 1-acylglycerol-3-phosphate O-acyltransferase -
NL412_RS04395 (747679) 747679..749091 + 1413 WP_000059395.1 cell division protein FtsP -
NL412_RS04400 (749202) 749202..751421 + 2220 WP_001551655.1 YgiQ family radical SAM protein -
NL412_RS04405 (751463) 751463..751720 - 258 WP_000848523.1 lipoprotein YqhH -
NL412_RS04410 (751771) 751771..752697 - 927 WP_001551654.1 YbjP/YqhG family protein -
NL412_RS04415 (752897) 752897..753724 - 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
NL412_RS04420 (753829) 753829..754992 - 1164 WP_001058802.1 alcohol dehydrogenase -
NL412_RS04425 (755186) 755186..756085 + 900 WP_001329635.1 DNA-binding transcriptional regulator YqhC -
NL412_RS04430 (756125) 756125..756784 - 660 WP_000268426.1 DedA family general envelope maintenance protein YghB -
NL412_RS04435 (756924) 756924..758111 - 1188 WP_001551653.1 cystathionine beta-lyase -
NL412_RS04440 (758363) 758363..759097 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
NL412_RS04445 (759104) 759104..759529 + 426 WP_255073343.1 TonB system transport protein ExbD -
NL412_RS04450 (759568) 759568..760452 - 885 WP_000018777.1 NADP(+)-dependent aldehyde reductase -
NL412_RS04455 (760643) 760643..761137 + 495 WP_000439331.1 TIGR00645 family protein -
NL412_RS04460 (761177) 761177..762217 - 1041 WP_000262171.1 L-glyceraldehyde 3-phosphate reductase -
NL412_RS04465 (762374) 762374..763261 + 888 WP_001551652.1 YghX family hydrolase -
NL412_RS04470 (763380) 763380..763667 + 288 WP_001059139.1 DUF2623 family protein YghW -
NL412_RS04475 (763856) 763856..764974 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
NL412_RS04480 (764977) 764977..765963 + 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
NL412_RS04485 (765953) 765953..767131 + 1179 WP_000017694.1 Ni/Fe-hydrogenase cytochrome b subunit -
NL412_RS04490 (767128) 767128..768831 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
NL412_RS04495 (768831) 768831..769325 + 495 WP_001221954.1 HyaD/HybD family hydrogenase maturation endopeptidase -
NL412_RS04500 (769318) 769318..769806 + 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
NL412_RS04505 (769799) 769799..770140 + 342 WP_001551651.1 hydrogenase maturation nickel metallochaperone HypA -
NL412_RS04510 (770153) 770153..770401 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
NL412_RS04515 (770471) 770471..771337 - 867 WP_001400742.1 glutathione-dependent disulfide-bond oxidoreductase -
NL412_RS04520 (771542) 771542..773401 + 1860 WP_001295514.1 bifunctional glutathionylspermidine amidase/synthase -
NL412_RS04525 (773693) 773693..775192 + 1500 WP_000933277.1 inorganic phosphate transporter PitB -
NL412_RS04530 (775241) 775241..775933 - 693 WP_001190784.1 dTMP kinase -
NL412_RS04535 (776107) 776107..776820 + 714 WP_001076239.1 dTMP kinase -
NL412_RS04540 (776852) 776852..777610 + 759 WP_001551649.1 hypothetical protein -
NL412_RS04545 (777656) 777656..779005 + 1350 WP_000896889.1 lipopolysaccharide biosynthesis protein -
NL412_RS04550 (779005) 779005..779841 + 837 WP_001551647.1 hypothetical protein -
NL412_RS04555 (779841) 779841..780401 + 561 WP_001551646.1 YtfJ family protein -
NL412_RS04560 (780432) 780432..781502 + 1071 WP_000779651.1 LPS export ABC transporter permease LptF -
NL412_RS04565 (781499) 781499..782578 + 1080 WP_001315007.1 LPS export ABC transporter permease LptG -
NL412_RS04570 (782613) 782613..783785 - 1173 WP_000524940.1 hypothetical protein VF
NL412_RS04575 (783785) 783785..784033 - 249 WP_000248097.1 acyl carrier protein -
NL412_RS04580 (784065) 784065..784979 - 915 WP_001551645.1 NAD-dependent epimerase/dehydratase family protein -
NL412_RS04585 (784976) 784976..786697 - 1722 WP_155104772.1 hypothetical protein VF
NL412_RS04590 (787068) 787068..788210 + 1143 WP_255073344.1 protein YghO -
NL412_RS04595 (788217) 788217..788981 - 765 WP_001308944.1 transcriptional regulator GlcC -
NL412_RS04600 (789232) 789232..790731 + 1500 WP_000026123.1 glycolate oxidase subunit GlcD -
NL412_RS04605 (790731) 790731..791783 + 1053 WP_000943083.1 glycolate oxidase subunit GlcE -
NL412_RS04610 (791794) 791794..793017 + 1224 WP_001194653.1 glycolate oxidase subunit GlcF -
NL412_RS04615 (793022) 793022..793426 + 405 WP_000853256.1 GlcG family protein -
NL412_RS04620 (793448) 793448..795619 + 2172 WP_001551642.1 malate synthase G -
NL412_RS04625 (795974) 795974..797656 + 1683 WP_000259302.1 glycolate permease GlcA -
NL412_RS04630 (798139) 798139..802704 + 4566 WP_016247683.1 hypothetical protein VF
NL412_RS04635 (802834) 802834..803643 + 810 WP_001305093.1 hypothetical protein VF
NL412_RS04640 (803709) 803709..804119 + 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
NL412_RS04645 (804137) 804137..805096 + 960 WP_024189718.1 hypothetical protein VF
NL412_RS04650 (805126) 805126..807186 + 2061 WP_001468189.1 hypothetical protein VF
NL412_RS04655 (807186) 807186..808679 + 1494 WP_000249375.1 hypothetical protein VF
NL412_RS04660 (808679) 808679..809902 + 1224 WP_001173425.1 hypothetical protein VF
NL412_RS04665 (809919) 809919..810374 + 456 WP_001087296.1 hypothetical protein VF
NL412_RS04670 (810378) 810378..810941 + 564 WP_001115117.1 hypothetical protein VF
NL412_RS04675 (810938) 810938..811309 + 372 WP_000820092.1 hypothetical protein VF
NL412_RS04680 (811306) 811306..811911 + 606 WP_001254776.1 hypothetical protein VF
NL412_RS04685 (811908) 811908..812885 + 978 WP_000633242.1 hypothetical protein VF
NL412_RS04690 (812882) 812882..814060 + 1179 WP_000095005.1 hypothetical protein VF
NL412_RS04695 (814062) 814062..814598 + 537 WP_000942771.1 hypothetical protein VF
NL412_RS04700 (815656) 815656..816432 + 777 WP_000124291.1 hypothetical protein VF
NL412_RS04705 (816429) 816429..817103 + 675 WP_000590243.1 hypothetical protein VF
NL412_RS04710 (817435) 817435..817637 + 203 Protein_763 transposase -
NL412_RS04715 (818088) 818088..818804 + 717 WP_000634338.1 K5 polysaccharide biosynthesis alpha-UDP-GlcNAc glycosyltransferase KfiA -
NL412_RS04720 (819236) 819236..820927 + 1692 WP_001332750.1 hypothetical protein VF
NL412_RS04725 (821024) 821024..822058 - 1035 Protein_766 IS481 family transposase -
NL412_RS04730 (822219) 822219..823781 + 1563 WP_001305085.1 hypothetical protein VF
NL412_RS04735 (823823) 823823..825001 + 1179 WP_001305084.1 hypothetical protein VF
NL412_RS04740 (825340) 825340..826509 - 1170 WP_001161856.1 hypothetical protein VF
NL412_RS04745 (826544) 826544..828571 - 2028 WP_000579513.1 hypothetical protein VF
NL412_RS04750 (828568) 828568..829308 - 741 WP_000030749.1 hypothetical protein VF
NL412_RS04755 (829318) 829318..830994 - 1677 WP_001564067.1 hypothetical protein VF
NL412_RS04760 (831018) 831018..832166 - 1149 WP_000905920.1 hypothetical protein VF
NL412_RS04765 (832238) 832238..833221 - 984 WP_001296394.1 hypothetical protein VF
NL412_RS04770 (834031) 834031..834201 - 171 Protein_775 IS110 family transposase -
NL412_RS04775 (834544) 834544..835386 - 843 WP_022645115.1 DUF4942 domain-containing protein -
NL412_RS04780 (835471) 835471..835665 - 195 WP_024181941.1 DUF957 domain-containing protein -
NL412_RS04785 (835690) 835690..835893 - 204 WP_001398797.1 DUF5983 family protein -
NL412_RS04790 (835893) 835893..836267 - 375 WP_000854765.1 TA system toxin CbtA family protein Toxin Detail
NL412_RS04795 (836357) 836357..836725 - 369 WP_001295723.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
NL412_RS04800 (836888) 836888..837109 - 222 WP_000692341.1 DUF987 domain-containing protein -
NL412_RS04805 (837172) 837172..837648 - 477 WP_001186774.1 RadC family protein -
NL412_RS04810 (837664) 837664..838143 - 480 WP_057109541.1 antirestriction protein -
NL412_RS04815 (838409) 838409..839227 - 819 WP_001175165.1 DUF932 domain-containing protein -
NL412_RS04820 (839317) 839317..839550 - 234 WP_001278293.1 DUF905 family protein -
NL412_RS04825 (839556) 839556..840233 - 678 WP_001097302.1 hypothetical protein -
NL412_RS04830 (840381) 840381..841061 - 681 WP_001282921.1 WYL domain-containing protein -
NL412_RS04835 (841264) 841264..842148 - 885 WP_001116795.1 YfjP family GTPase -
NL412_RS04840 (842249) 842249..843472 + 1224 WP_001107219.1 hypothetical protein -
NL412_RS04845 (844635) 844635..845165 - 531 WP_251288182.1 DNA-binding protein -
NL412_RS04850 (845835) 845835..846566 + 732 WP_001075495.1 inovirus Gp2 family protein -
NL412_RS04855 (847087) 847087..847539 + 453 WP_000558152.1 acyltransferase -
NL412_RS04860 (848075) 848075..849010 + 936 WP_000332862.1 pseudouridine kinase -
NL412_RS04865 (849003) 849003..849938 + 936 WP_001290195.1 pseudouridine-5'-phosphate glycosidase -
NL412_RS04870 (850022) 850022..851272 + 1251 WP_001328687.1 NupC/NupG family nucleoside CNT transporter -
NL412_RS04875 (851291) 851291..852385 - 1095 WP_000370278.1 sugar kinase -
NL412_RS04880 (853686) 853686..854252 + 567 WP_001126810.1 inovirus-type Gp2 protein -
NL412_RS04885 (854510) 854510..855085 + 576 WP_001564054.1 hypothetical protein -
NL412_RS04890 (855154) 855154..855387 + 234 WP_000958492.1 AlpA family transcriptional regulator -
NL412_RS04895 (855384) 855384..855509 + 126 WP_001342704.1 hypothetical protein -
NL412_RS04900 (855638) 855638..855700 + 63 Protein_801 IS3 family transposase IS2 Transposase
NL412_RS04905 (855692) 855692..855952 - 261 Protein_802 IS3 family transposase IS2 Transposase
NL412_RS04910 (856043) 856043..857200 + 1158 Protein_803 hypothetical protein VF
NL412_RS04915 (857300) 857300..857971 + 672 WP_223350500.1 TetR/AcrR family transcriptional regulator -
NL412_RS04920 (858102) 858102..858287 + 186 WP_223349228.1 helix-turn-helix domain-containing protein -
NL412_RS04925 (858644) 858644..859189 - 546 WP_001564047.1 propanediol utilization system shell hexameric protein GrpS -
NL412_RS04930 (859234) 859234..860385 - 1152 WP_001001003.1 propanediol utilization system methionine adenosyltransferase GrpR -
NL412_RS04935 (860514) 860514..861569 - 1056 WP_000494233.1 hypothetical protein VF
NL412_RS04940 (861586) 861586..862848 - 1263 WP_001329690.1 propanediol utilization sensor histidine kinase GrpP -
NL412_RS04945 (863398) 863398..863919 - 522 WP_000237741.1 reverse transcriptase domain-containing protein -
NL412_RS04950 (863947) 863947..864486 - 540 WP_022645120.1 hypothetical protein -
NL412_RS04955 (864972) 864972..865877 - 906 WP_001086421.1 propanediol utilization system permease GrpO -
NL412_RS04960 (866014) 866014..866931 - 918 WP_251288183.1 glycyl radical diol dehydratase-activating enzyme GrpN -
NL412_RS04965 (867040) 867040..869592 - 2553 WP_000890295.1 glycyl radical diol dehydratase GrpM -
NL412_RS04970 (869641) 869641..870216 - 576 WP_000722279.1 propanediol utilization system protease GrpL -
NL412_RS04975 (870227) 870227..870526 - 300 WP_033559819.1 propanediol utilization system shell hexameric protein GrpK -
NL412_RS04980 (870550) 870550..872067 - 1518 WP_000997839.1 hypothetical protein VF
NL412_RS04985 (872128) 872128..872913 - 786 WP_001205499.1 propanediol utilization microcompartment protein GrpI -
NL412_RS04990 (872935) 872935..873216 - 282 WP_001301171.1 propanediol utilization system shell hexameric protein GrpH -
NL412_RS04995 (873501) 873501..874697 - 1197 WP_001362987.1 propanediol utilization system propionate kinase GrpG -
NL412_RS05000 (874726) 874726..875223 - 498 WP_001301167.1 propanediol utilization system heme-binding protein GrpF -
NL412_RS05005 (875251) 875251..875520 - 270 WP_000280292.1 propanediol utilization microcompartment vertex protein GrpE -
NL412_RS05010 (875532) 875532..876257 - 726 WP_001329683.1 propanediol utilization system flavoprotein GrpD -
NL412_RS05015 (876241) 876241..876999 - 759 WP_001332070.1 propanediol utilization system chaperone GrpC -
NL412_RS05020 (877054) 877054..877740 - 687 WP_022645123.1 propanediol utilization system phosphotransacylase GrpB -
NL412_RS05025 (877880) 877880..878998 - 1119 WP_000135343.1 hypothetical protein VF
NL412_RS05030 (879349) 879349..879848 + 500 Protein_827 DNA-binding protein -
NL412_RS05035 (879944) 879944..880177 + 234 WP_000124176.1 hypothetical protein -
NL412_RS05040 (880230) 880230..880421 - 192 WP_001287878.1 DUF4222 domain-containing protein -
NL412_RS05045 (880869) 880869..880997 + 129 WP_023063643.1 hypothetical protein -
NL412_RS05050 (881142) 881142..881402 + 261 Protein_831 integrase core domain-containing protein -
NL412_RS05055 (881545) 881545..883290 + 1746 WP_022645125.1 NERD domain-containing protein/DEAD/DEAH box helicase -
NL412_RS05060 (883446) 883446..883632 + 187 Protein_833 hypothetical protein -
NL412_RS05065 (883684) 883684..885031 + 1348 Protein_834 VasL domain-containing protein -
NL412_RS05070 (885148) 885148..885792 + 645 WP_024181942.1 hypothetical protein -
NL412_RS05075 (885933) 885933..887165 + 1233 WP_022645126.1 phosphoadenosine phosphosulfate reductase -
NL412_RS05080 (887150) 887150..887788 + 639 WP_000502858.1 ParB N-terminal domain-containing protein -
NL412_RS05085 (887867) 887867..888136 + 270 WP_000226517.1 PerC family transcriptional regulator -
NL412_RS05090 (888157) 888157..888801 + 645 WP_001364388.1 hypothetical protein -
NL412_RS05095 (888866) 888866..889189 + 324 WP_001564033.1 hypothetical protein -
NL412_RS05100 (889237) 889237..891435 - 2199 WP_000093094.1 DEAD/DEAH box helicase -
NL412_RS05105 (891432) 891432..892748 - 1317 WP_000117526.1 ATP-binding protein -
NL412_RS05110 (892752) 892752..895061 - 2310 WP_139509894.1 TerB N-terminal domain-containing protein -
NL412_RS05115 (895290) 895290..895475 - 186 Protein_844 integrase -
NL412_RS05120 (895699) 895699..896439 + 741 WP_001403203.1 outer membrane beta-barrel protein -
NL412_RS05125 (896591) 896591..898090 + 1500 WP_001672282.1 phosphoethanolamine transferase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance