MGE detailed information
MGE type: Prophage MGE length: 56069 bp
Accession: NZ_CP116929 Location: 3478403..3534471 Organism: Escherichia coli strain MLI105 Replicon: chromosome
Accession: NZ_CP116929 Location: 3478403..3534471 Organism: Escherichia coli strain MLI105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL421_RS17210 (3474307) | 3474307..3476505 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| NL421_RS17215 (3476515) | 3476515..3477471 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| NL421_RS17220 (3477522) | 3477522..3477860 | + | 339 | Protein_3334 | LysR substrate-binding domain-containing protein | - |
| NL421_RS17225 (3478403) | 3478403..3480421 | - | 2019 | WP_048217707.1 | antiviral reverse transcriptase Drt3b | - |
| NL421_RS17230 (3480412) | 3480412..3481689 | - | 1278 | WP_001471072.1 | antiviral reverse transcriptase Drt3a | - |
| NL421_RS17235 (3482084) | 3482084..3482356 | - | 273 | WP_001185342.1 | ogr/Delta-like zinc finger family protein | - |
| NL421_RS17240 (3482362) | 3482362..3482913 | - | 552 | WP_000126947.1 | phage polarity suppression protein | - |
| NL421_RS17245 (3482910) | 3482910..3483653 | - | 744 | WP_001066218.1 | septation initiation protein | - |
| NL421_RS17250 (3484246) | 3484246..3484605 | - | 360 | WP_001246996.1 | hypothetical protein | - |
| NL421_RS17255 (3484598) | 3484598..3484774 | - | 177 | WP_001118612.1 | host cell division inhibitor Icd-like protein | - |
| NL421_RS17260 (3484906) | 3484906..3485079 | + | 174 | WP_001605077.1 | hypothetical protein | - |
| NL421_RS17265 (3485112) | 3485112..3485402 | - | 291 | WP_001567459.1 | hypothetical protein | - |
| NL421_RS17270 (3485528) | 3485528..3486352 | - | 825 | WP_001471076.1 | hypothetical protein | - |
| NL421_RS17275 (3486349) | 3486349..3487539 | - | 1191 | WP_040075774.1 | Prophage integrase IntS ; Integrase | Integrase |
| NL421_RS17280 (3488129) | 3488129..3488269 | + | 141 | Protein_3346 | SOS response-associated peptidase | - |
| NL421_RS17285 (3488497) | 3488497..3489342 | + | 846 | WP_001619161.1 | AAA family ATPase | - |
| NL421_RS17290 (3489335) | 3489335..3489733 | + | 399 | WP_001041461.1 | hypothetical protein | - |
| NL421_RS17295 (3489733) | 3489733..3490398 | + | 666 | WP_000957441.1 | hypothetical protein | - |
| NL421_RS17300 (3490436) | 3490436..3490754 | - | 319 | Protein_3350 | DUF4113 domain-containing protein | - |
| NL421_RS17305 (3490849) | 3490849..3492077 | + | 1229 | WP_113708090.1 | IS3 family transposase IS2 | Transposase |
| NL421_RS17310 (3492151) | 3492151..3492234 | + | 84 | Protein_3352 | DinI family protein | - |
| NL421_RS17315 (3492665) | 3492665..3494554 | + | 1890 | WP_000834404.1 | DUF262 domain-containing protein | - |
| NL421_RS17320 (3494656) | 3494656..3494739 | - | 84 | Protein_3354 | hypothetical protein | - |
| NL421_RS17325 (3494982) | 3494982..3495152 | + | 171 | Protein_3355 | integrase | - |
| NL421_RS17330 (3495157) | 3495157..3495975 | - | 819 | WP_223675306.1 | hypothetical protein | - |
| NL421_RS17335 (3496247) | 3496247..3498433 | - | 2187 | WP_162784868.1 | hypothetical protein | - |
| NL421_RS17340 (3498603) | 3498603..3499763 | - | 1161 | Protein_3358 | phage terminase large subunit family protein | - |
| NL421_RS17345 (3499738) | 3499738..3500283 | - | 546 | WP_000453576.1 | DNA-packaging protein | - |
| NL421_RS17350 (3500672) | 3500672..3500905 | + | 234 | WP_000105084.1 | YlcI/YnfO family protein | - |
| NL421_RS17355 (3500962) | 3500962..3501372 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| NL421_RS17360 (3501724) | 3501724..3501876 | - | 153 | WP_001139675.1 | hypothetical protein | - |
| NL421_RS17365 (3501864) | 3501864..3502331 | - | 468 | WP_001300226.1 | lysis protein | - |
| NL421_RS17370 (3502328) | 3502328..3502861 | - | 534 | WP_114427722.1 | lysozyme | - |
| NL421_RS17375 (3502996) | 3502996..3503235 | + | 240 | WP_032264896.1 | hypothetical protein | - |
| NL421_RS17380 (3503232) | 3503232..3503546 | - | 315 | WP_000193273.1 | YdfR family protein | - |
| NL421_RS17385 (3503551) | 3503551..3503766 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| NL421_RS17390 (3503837) | 3503837..3504199 | - | 363 | Protein_3368 | site-specific DNA-methyltransferase | - |
| NL421_RS17395 (3504469) | 3504469..3504654 | - | 186 | WP_000680348.1 | hypothetical protein | - |
| NL421_RS17400 (3504846) | 3504846..3505388 | - | 543 | WP_021519681.1 | hypothetical protein | - |
| NL421_RS17405 (3505600) | 3505600..3506352 | - | 753 | WP_044862710.1 | antitermination protein | - |
| NL421_RS17410 (3506366) | 3506366..3507355 | - | 990 | WP_074527437.1 | DUF968 domain-containing protein | - |
| NL421_RS17415 (3507363) | 3507363..3508160 | - | 798 | WP_032252671.1 | KilA-N domain-containing protein | - |
| NL421_RS17420 (3508180) | 3508180..3508569 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NL421_RS17425 (3508566) | 3508566..3508892 | - | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| NL421_RS17430 (3508889) | 3508889..3509542 | - | 654 | WP_001355692.1 | phage N-6-adenine-methyltransferase | - |
| NL421_RS17435 (3509542) | 3509542..3510036 | - | 495 | WP_114427720.1 | PerC family transcriptional regulator | - |
| NL421_RS17440 (3510033) | 3510033..3511025 | - | 993 | WP_114427719.1 | hypothetical protein | - |
| NL421_RS17445 (3510982) | 3510982..3511155 | - | 174 | WP_077827641.1 | DUF4222 domain-containing protein | - |
| NL421_RS17450 (3511370) | 3511370..3511927 | - | 558 | WP_114427718.1 | protein YmfL | - |
| NL421_RS17455 (3511950) | 3511950..3512198 | - | 249 | WP_000187185.1 | YdaS family helix-turn-helix protein | - |
| NL421_RS17460 (3512334) | 3512334..3513020 | + | 687 | WP_000853319.1 | helix-turn-helix transcriptional regulator | - |
| NL421_RS17465 (3513003) | 3513003..3513893 | - | 891 | WP_000389078.1 | BRCT domain-containing protein | - |
| NL421_RS17470 (3514096) | 3514096..3514299 | + | 204 | WP_001083098.1 | ClpX C4-type zinc finger protein | - |
| NL421_RS17475 (3514527) | 3514527..3514718 | - | 192 | WP_000159356.1 | hypothetical protein | - |
| NL421_RS17480 (3514832) | 3514832..3515142 | + | 311 | Protein_3386 | hypothetical protein | - |
| NL421_RS17485 (3515157) | 3515157..3515519 | + | 363 | WP_000135680.1 | protein YfdP | - |
| NL421_RS17490 (3515585) | 3515585..3516409 | + | 825 | WP_000081269.1 | DUF2303 family protein | - |
| NL421_RS17495 (3516537) | 3516537..3517073 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| NL421_RS17500 (3517064) | 3517064..3517426 | + | 363 | WP_112017102.1 | hypothetical protein | - |
| NL421_RS17505 (3517426) | 3517426..3517731 | + | 306 | WP_114427717.1 | protein YfdT | - |
| NL421_RS17510 (3517731) | 3517731..3518081 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| NL421_RS17515 (3518003) | 3518003..3519121 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| NL421_RS17525 (3519326) | 3519326..3520579 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL421_RS17530 (3520591) | 3520591..3521694 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL421_RS17535 (3521982) | 3521982..3523037 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| NL421_RS17540 (3523076) | 3523076..3523477 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3524195) | 3524195..3524275 | - | 81 | NuclAT_13 | - | - |
| - (3524195) | 3524195..3524275 | - | 81 | NuclAT_13 | - | - |
| - (3524195) | 3524195..3524275 | - | 81 | NuclAT_13 | - | - |
| - (3524195) | 3524195..3524275 | - | 81 | NuclAT_13 | - | - |
| NL421_RS17545 (3523535) | 3523535..3524779 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| NL421_RS17550 (3524871) | 3524871..3525329 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| NL421_RS17555 (3525590) | 3525590..3527047 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| NL421_RS17560 (3527104) | 3527104..3527625 | - | 522 | Protein_3401 | peptide chain release factor H | - |
| NL421_RS17565 (3527621) | 3527621..3527827 | - | 207 | Protein_3402 | RtcB family protein | - |
| NL421_RS17570 (3528145) | 3528145..3528597 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| NL421_RS17575 (3528607) | 3528607..3529005 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL421_RS17580 (3529008) | 3529008..3529301 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL421_RS17585 (3529353) | 3529353..3530408 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NL421_RS17590 (3530479) | 3530479..3531264 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NL421_RS17595 (3531236) | 3531236..3532948 | + | 1713 | Protein_3408 | Flagellar biosynthesis protein FlhA | VF |
| NL421_RS17600 (3533172) | 3533172..3533669 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NL421_RS17605 (3533845) | 3533845..3534594 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| NL421_RS17610 (3534804) | 3534804..3535064 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| NL421_RS17615 (3535067) | 3535067..3535345 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| NL421_RS17620 (3535501) | 3535501..3536241 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NL421_RS17625 (3536212) | 3536212..3536979 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NL421_RS17630 (3537185) | 3537185..3537763 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|