MGE detailed information
MGE type: Prophage MGE length: 73101 bp
Accession: NZ_CP116919 Location: 3252470..3325570 Organism: Escherichia coli strain MLI102 Replicon: chromosome
Accession: NZ_CP116919 Location: 3252470..3325570 Organism: Escherichia coli strain MLI102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL418_RS16585 (3247572) | 3247572..3248198 | + | 627 | WP_000165876.1 | isochorismate family cysteine hydrolase YcaC | - |
| NL418_RS16590 (3248233) | 3248233..3249096 | - | 864 | WP_000534637.1 | dimethyl sulfoxide reductase anchor subunit DmsC | - |
| NL418_RS16595 (3249098) | 3249098..3249715 | - | 618 | WP_000213098.1 | dimethylsulfoxide reductase subunit B | - |
| NL418_RS16600 (3249726) | 3249726..3252170 | - | 2445 | WP_000850305.1 | dimethylsulfoxide reductase subunit A | - |
| NL418_RS16605 (3252470) | 3252470..3253462 | - | 993 | WP_000023737.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NL418_RS16610 (3253532) | 3253532..3253873 | - | 342 | WP_001368591.1 | helix-turn-helix transcriptional regulator | - |
| NL418_RS16615 (3253978) | 3253978..3254499 | + | 522 | WP_001204236.1 | Cox family DNA-binding protein | - |
| NL418_RS16620 (3254504) | 3254504..3254899 | + | 396 | WP_236922017.1 | hypothetical protein | - |
| NL418_RS16625 (3254932) | 3254932..3255123 | - | 192 | WP_001287828.1 | hypothetical protein | - |
| NL418_RS16630 (3255261) | 3255261..3255611 | + | 351 | WP_000776267.1 | DUF4761 family protein | - |
| NL418_RS16635 (3255622) | 3255622..3255900 | + | 279 | WP_000159455.1 | hypothetical protein | - |
| NL418_RS16640 (3255912) | 3255912..3256154 | + | 243 | WP_000514277.1 | DUF4754 family protein | - |
| NL418_RS16645 (3256151) | 3256151..3256264 | + | 114 | WP_000021715.1 | hypothetical protein | - |
| NL418_RS16650 (3256358) | 3256358..3256768 | + | 411 | WP_032229733.1 | hypothetical protein | - |
| NL418_RS16655 (3256797) | 3256797..3257000 | + | 204 | WP_032229732.1 | hypothetical protein | - |
| NL418_RS16660 (3256997) | 3256997..3257263 | + | 267 | WP_021545614.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NL418_RS16665 (3257260) | 3257260..3257550 | + | 291 | WP_000104307.1 | hypothetical protein | - |
| NL418_RS16670 (3257669) | 3257669..3257836 | + | 168 | Protein_3132 | hypothetical protein | - |
| NL418_RS16675 (3257881) | 3257881..3258111 | + | 231 | WP_032229731.1 | hypothetical protein | - |
| NL418_RS16680 (3258184) | 3258184..3258549 | + | 366 | WP_272773412.1 | hypothetical protein | - |
| NL418_RS16685 (3258556) | 3258556..3261376 | + | 2821 | Protein_3135 | replication endonuclease | - |
| NL418_RS16690 (3261453) | 3261453..3262412 | + | 960 | WP_000686540.1 | plasmid segregation protein ParM | - |
| NL418_RS16695 (3262417) | 3262417..3262731 | + | 315 | WP_000211292.1 | plasmid partitioning/stability family protein | - |
| NL418_RS16700 (3262751) | 3262751..3263182 | + | 432 | WP_272773414.1 | hypothetical protein | - |
| NL418_RS16705 (3263184) | 3263184..3263447 | + | 264 | WP_000224216.1 | hypothetical protein | - |
| NL418_RS16710 (3263959) | 3263959..3265003 | - | 1045 | Protein_3140 | phage portal protein | - |
| NL418_RS16715 (3265003) | 3265003..3266751 | - | 1749 | Protein_3141 | terminase family protein | - |
| NL418_RS16720 (3266943) | 3266943..3267740 | + | 798 | WP_272773415.1 | GPO family capsid scaffolding protein | - |
| NL418_RS16725 (3267764) | 3267764..3268816 | + | 1053 | WP_053888342.1 | phage major capsid protein, P2 family | - |
| NL418_RS16730 (3268861) | 3268861..3269659 | + | 799 | Protein_3144 | phage terminase small subunit | - |
| NL418_RS16735 (3269761) | 3269761..3270255 | + | 495 | WP_000063100.1 | head completion/stabilization protein | - |
| NL418_RS16740 (3270255) | 3270255..3270509 | + | 255 | WP_000864904.1 | tail protein X | - |
| NL418_RS16745 (3270457) | 3270457..3270780 | + | 324 | WP_001342221.1 | phage holin family protein | - |
| NL418_RS16750 (3270777) | 3270777..3271169 | + | 393 | WP_272773416.1 | M15 family metallopeptidase | - |
| NL418_RS16755 (3271166) | 3271166..3271558 | + | 393 | Protein_3149 | hypothetical protein | - |
| NL418_RS16760 (3271699) | 3271699..3271839 | + | 141 | WP_193751550.1 | DUF1737 domain-containing protein | - |
| NL418_RS16765 (3271904) | 3271904..3273578 | + | 1675 | Protein_3151 | sialate O-acetylesterase | - |
| NL418_RS16770 (3273602) | 3273602..3274068 | + | 467 | Protein_3152 | phage tail protein | - |
| NL418_RS16775 (3274061) | 3274061..3274696 | + | 636 | WP_000356366.1 | phage virion morphogenesis protein | - |
| NL418_RS16780 (3274708) | 3274708..3275274 | + | 567 | WP_272773847.1 | phage baseplate assembly protein V | - |
| NL418_RS16785 (3275271) | 3275271..3275621 | + | 351 | WP_272773418.1 | GPW/gp25 family protein | - |
| NL418_RS16790 (3275625) | 3275625..3276521 | + | 897 | WP_001111949.1 | baseplate J/gp47 family protein | - |
| NL418_RS16795 (3276514) | 3276514..3277122 | + | 609 | WP_000071724.1 | phage tail protein I | - |
| NL418_RS16800 (3277119) | 3277119..3278759 | + | 1641 | WP_272773419.1 | phage tail protein | - |
| NL418_RS16805 (3278770) | 3278770..3279243 | + | 474 | WP_024240575.1 | phage tail protein | - |
| NL418_RS16810 (3279250) | 3279250..3279864 | - | 615 | WP_000072166.1 | tail fiber assembly protein | - |
| NL418_RS16815 (3279864) | 3279864..3280376 | - | 513 | WP_272773421.1 | phage tail protein | - |
| NL418_RS16820 (3280448) | 3280448..3280791 | + | 344 | Protein_3162 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| NL418_RS16825 (3280786) | 3280786..3281046 | + | 261 | WP_106494424.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| NL418_RS16830 (3281073) | 3281073..3281561 | - | 489 | WP_000979945.1 | phage tail protein | - |
| NL418_RS16835 (3281574) | 3281574..3284377 | - | 2804 | Protein_3165 | phage tail tape measure protein | - |
| NL418_RS16840 (3284364) | 3284364..3284519 | - | 156 | WP_000333494.1 | GpE family phage tail protein | - |
| NL418_RS16845 (3284528) | 3284528..3284893 | - | 366 | WP_000665313.1 | tail protein | - |
| NL418_RS16850 (3284948) | 3284948..3285460 | - | 513 | WP_000290450.1 | phage major tail tube protein | - |
| NL418_RS16855 (3285460) | 3285460..3286644 | - | 1185 | WP_000005454.1 | phage tail sheath family protein | - |
| NL418_RS16860 (3286801) | 3286801..3287909 | + | 1109 | Protein_3170 | phage late control D family protein | - |
| NL418_RS16865 (3287950) | 3287950..3288210 | + | 261 | WP_000488107.1 | ogr/Delta-like zinc finger family protein | - |
| NL418_RS16870 (3288402) | 3288402..3288542 | + | 141 | WP_000078916.1 | Hok/Gef family protein | - |
| NL418_RS16875 (3288848) | 3288848..3290140 | - | 1293 | WP_000886683.1 | serine--tRNA ligase | - |
| NL418_RS16880 (3290231) | 3290231..3291574 | - | 1344 | WP_000067755.1 | replication-associated recombination protein RarA | - |
| NL418_RS16885 (3291585) | 3291585..3292196 | - | 612 | WP_001522754.1 | outer membrane lipoprotein chaperone LolA | - |
| NL418_RS16890 (3292355) | 3292355..3296383 | - | 4029 | WP_272773422.1 | DNA translocase FtsK | - |
| NL418_RS16895 (3296518) | 3296518..3297012 | - | 495 | WP_000228473.1 | leucine-responsive transcriptional regulator Lrp | - |
| NL418_RS16900 (3297557) | 3297557..3298522 | + | 966 | WP_000537418.1 | thioredoxin-disulfide reductase | - |
| NL418_RS16905 (3298645) | 3298645..3300411 | + | 1767 | WP_001043596.1 | cysteine/glutathione ABC transporter permease/ATP-binding protein CydD | - |
| NL418_RS16910 (3300412) | 3300412..3302133 | + | 1722 | WP_001550899.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| NL418_RS16915 (3302175) | 3302175..3302879 | + | 705 | WP_001241678.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| NL418_RS16920 (3303164) | 3303164..3303382 | + | 219 | WP_001040187.1 | translation initiation factor IF-1 | - |
| NL418_RS16930 (3303873) | 3303873..3304154 | - | 282 | Protein_3183 | DUF4942 domain-containing protein | - |
| NL418_RS16935 (3304436) | 3304436..3305440 | - | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| NL418_RS16940 (3305512) | 3305512..3306072 | - | 561 | Protein_3185 | DUF4942 domain-containing protein | - |
| NL418_RS16945 (3306157) | 3306157..3306354 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| NL418_RS16950 (3306366) | 3306366..3306857 | - | 492 | WP_000976828.1 | DUF5983 family protein | - |
| NL418_RS16955 (3306854) | 3306854..3307228 | - | 375 | WP_272773424.1 | TA system toxin CbtA family protein | Toxin Detail |
| NL418_RS16960 (3307275) | 3307275..3307649 | - | 375 | WP_001280958.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NL418_RS16965 (3307812) | 3307812..3308034 | - | 223 | Protein_3190 | DUF987 domain-containing protein | - |
| NL418_RS16970 (3308097) | 3308097..3308573 | - | 477 | WP_272773425.1 | RadC family protein | - |
| NL418_RS16975 (3308588) | 3308588..3309068 | - | 481 | Protein_3192 | antirestriction protein | - |
| NL418_RS16980 (3309218) | 3309218..3309370 | - | 153 | WP_272773426.1 | hypothetical protein | - |
| NL418_RS16985 (3309384) | 3309384..3310203 | - | 820 | Protein_3194 | DUF932 domain-containing protein | - |
| NL418_RS16990 (3310294) | 3310294..3310467 | - | 174 | WP_272773427.1 | DUF905 family protein | - |
| NL418_RS16995 (3310587) | 3310587..3310829 | - | 243 | WP_000348966.1 | DNA polymerase III subunit gamma/tau | - |
| NL418_RS17005 (3311945) | 3311945..3313015 | - | 1071 | WP_000021107.1 | hypothetical protein | VF |
| NL418_RS17010 (3313012) | 3313012..3313917 | - | 906 | WP_000203522.1 | diguanylate cyclase regulator RdcB family protein | - |
| NL418_RS17015 (3313914) | 3313914..3316298 | - | 2385 | WP_000544701.1 | dynamin family protein | - |
| NL418_RS17020 (3316516) | 3316516..3317388 | - | 873 | WP_032282744.1 | GTPase family protein | - |
| NL418_RS17025 (3317719) | 3317719..3317900 | + | 182 | Protein_3202 | hypothetical protein | - |
| NL418_RS17030 (3318129) | 3318129..3318203 | - | 75 | Protein_3203 | IS66 family transposase IS682 | Transposase |
| NL418_RS17035 (3318200) | 3318200..3318625 | - | 426 | WP_272773428.1 | IS66 family transposase ISEc23 | Transposase |
| NL418_RS17040 (3319742) | 3319742..3320008 | - | 267 | Protein_3205 | colibactin self-protection protein ClbS | - |
| NL418_RS17045 (3320059) | 3320059..3321242 | + | 1184 | Protein_3206 | IS3 family transposase IS629 | Transposase |
| NL418_RS17050 (3321316) | 3321316..3321655 | - | 340 | Protein_3207 | IS3 family transposase IS629 | Transposase |
| NL418_RS17055 (3321971) | 3321971..3322615 | - | 645 | WP_272773429.1 | hypothetical protein | - |
| NL418_RS17060 (3322636) | 3322636..3322905 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| NL418_RS17065 (3322984) | 3322984..3323622 | - | 639 | WP_272773430.1 | ParB N-terminal domain-containing protein | - |
| NL418_RS17070 (3323607) | 3323607..3324839 | - | 1233 | WP_272773431.1 | phosphoadenosine phosphosulfate reductase | - |
| NL418_RS17075 (3325340) | 3325340..3328020 | - | 2681 | Protein_3212 | AAA domain-containing protein | - |
| NL418_RS17080 (3328261) | 3328261..3329307 | - | 1047 | WP_272773432.1 | POTRA domain-containing protein | - |
| NL418_RS17085 (3329411) | 3329411..3329560 | - | 150 | WP_272773433.1 | hypothetical protein | - |
| NL418_RS17090 (3329982) | 3329982..3330173 | + | 192 | WP_001287882.1 | DUF4222 domain-containing protein | - |
| NL418_RS17095 (3330226) | 3330226..3330459 | - | 234 | WP_044071486.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|