MGE detailed information
MGE type: Genomic_island MGE length: 57625 bp
Accession: NZ_CP116115 Location: 305028..362652 Organism: Escherichia coli strain DETEC-P793 Replicon: chromosome
Accession: NZ_CP116115 Location: 305028..362652 Organism: Escherichia coli strain DETEC-P793 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC92_RS01375 (301757) | 301757..302476 | - | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
| PIC92_RS01380 (302473) | 302473..304104 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| PIC92_RS01385 (304285) | 304285..304515 | + | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIC92_RS01390 (304527) | 304527..304799 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PIC92_RS01395 (305028) | 305028..305324 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PIC92_RS01400 (305352) | 305352..305525 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PIC92_RS01405 (305644) | 305644..307161 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| PIC92_RS01410 (307398) | 307398..308855 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| PIC92_RS01415 (308914) | 308914..311061 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| PIC92_RS01420 (311141) | 311141..312475 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PIC92_RS01425 (312841) | 312841..314379 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PIC92_RS01430 (315128) | 315128..315697 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| PIC92_RS01435 (315794) | 315794..315991 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| PIC92_RS01440 (316003) | 316003..316491 | - | 489 | WP_000777545.1 | DUF5983 family protein | - |
| PIC92_RS01445 (316488) | 316488..316862 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIC92_RS01450 (316952) | 316952..317320 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIC92_RS01455 (317483) | 317483..317704 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| PIC92_RS01460 (317767) | 317767..318243 | - | 477 | WP_001186786.1 | RadC family protein | - |
| PIC92_RS01465 (318259) | 318259..318744 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| PIC92_RS01470 (318835) | 318835..319653 | - | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| PIC92_RS01475 (319743) | 319743..319976 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| PIC92_RS01480 (319982) | 319982..320659 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| PIC92_RS01485 (320807) | 320807..321487 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PIC92_RS01490 (321690) | 321690..322574 | - | 885 | WP_001116801.1 | YfjP family GTPase | - |
| PIC92_RS01495 (322675) | 322675..323898 | + | 1224 | WP_001773856.1 | hypothetical protein | - |
| PIC92_RS01500 (325351) | 325351..326082 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| PIC92_RS01505 (326429) | 326429..327004 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| PIC92_RS01510 (327073) | 327073..327306 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| PIC92_RS01515 (327303) | 327303..327428 | + | 126 | WP_000831909.1 | hypothetical protein | - |
| PIC92_RS01520 (327557) | 327557..327619 | + | 63 | Protein_291 | IS3 family transposase IS2 | Transposase |
| PIC92_RS01525 (327611) | 327611..327871 | - | 261 | Protein_292 | IS3 family transposase IS2 | Transposase |
| PIC92_RS01530 (327974) | 327974..329119 | + | 1146 | Protein_293 | Multidrug resistance protein MexB | VF |
| PIC92_RS01535 (329225) | 329225..329611 | + | 387 | WP_153782320.1 | TetR family transcriptional regulator | - |
| PIC92_RS01540 (329862) | 329862..330206 | + | 345 | WP_001773854.1 | hypothetical protein | VF |
| PIC92_RS01545 (330563) | 330563..331108 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| PIC92_RS01550 (331153) | 331153..332304 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| PIC92_RS01555 (332433) | 332433..333488 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| PIC92_RS01560 (333505) | 333505..334767 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| PIC92_RS01565 (335317) | 335317..335799 | - | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| PIC92_RS01570 (335866) | 335866..336405 | - | 540 | WP_001332064.1 | maturase | - |
| PIC92_RS01575 (336891) | 336891..337796 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| PIC92_RS01580 (337933) | 337933..338850 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| PIC92_RS01585 (338959) | 338959..341511 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| PIC92_RS01590 (341560) | 341560..342135 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| PIC92_RS01595 (342146) | 342146..342445 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| PIC92_RS01600 (342469) | 342469..343986 | - | 1518 | WP_001773853.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| PIC92_RS01605 (344047) | 344047..344832 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| PIC92_RS01610 (344854) | 344854..345135 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| PIC92_RS01615 (345420) | 345420..346616 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| PIC92_RS01620 (346645) | 346645..347142 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| PIC92_RS01625 (347170) | 347170..347439 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| PIC92_RS01630 (347451) | 347451..348176 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| PIC92_RS01635 (348160) | 348160..348918 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| PIC92_RS01640 (348973) | 348973..349659 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| PIC92_RS01645 (349799) | 349799..350917 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| PIC92_RS01650 (351268) | 351268..351767 | + | 500 | Protein_317 | DNA-binding protein | - |
| PIC92_RS01655 (351863) | 351863..352096 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| PIC92_RS01660 (352149) | 352149..352340 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| PIC92_RS01665 (353020) | 353020..353364 | + | 345 | Protein_320 | POTRA domain-containing protein | - |
| PIC92_RS01670 (353364) | 353364..353840 | + | 477 | Protein_321 | VasL domain-containing protein | - |
| PIC92_RS01675 (354079) | 354079..355497 | + | 1419 | WP_271293017.1 | hypothetical protein | - |
| PIC92_RS01680 (355629) | 355629..357413 | + | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| PIC92_RS01685 (357413) | 357413..358165 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| PIC92_RS01690 (358162) | 358162..359466 | + | 1305 | WP_000192872.1 | hypothetical protein | - |
| PIC92_RS01695 (359463) | 359463..360188 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| PIC92_RS01700 (360741) | 360741..361316 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| PIC92_RS01705 (361324) | 361324..362652 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| PIC92_RS01710 (362787) | 362787..362972 | - | 186 | Protein_329 | transposase domain-containing protein | - |
| PIC92_RS01720 (364219) | 364219..364566 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| PIC92_RS01725 (365184) | 365184..365877 | - | 694 | Protein_332 | IS1 family transposase | - |
| PIC92_RS01730 (366130) | 366130..367599 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|