MGE detailed information
MGE type: Conjugative plasmid MGE length: 103125 bp
Accession: NZ_CP116113 Location: 1..103125 Organism: Escherichia coli strain DETEC-P80 Replicon: plasmid pDETEC21
Accession: NZ_CP116113 Location: 1..103125 Organism: Escherichia coli strain DETEC-P80 Replicon: plasmid pDETEC21
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC84_RS24480 (101) | 101..349 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| PIC84_RS24485 (594) | 594..668 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| PIC84_RS24490 (661) | 661..1518 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| PIC84_RS24495 (2219) | 2219..2359 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| PIC84_RS24500 (2457) | 2457..2918 | + | 462 | WP_072643484.1 | histidine phosphatase family protein | - |
| PIC84_RS24505 (3074) | 3074..4273 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| PIC84_RS24510 (4283) | 4283..4471 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| PIC84_RS24515 (4486) | 4486..4722 | - | 237 | WP_272756116.1 | hypothetical protein | - |
| PIC84_RS24520 (4642) | 4642..6222 | + | 1581 | WP_269516186.1 | P-loop NTPase fold protein | - |
| PIC84_RS24525 (6272) | 6272..7171 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| PIC84_RS24530 (7161) | 7161..7451 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| PIC84_RS24535 (7747) | 7747..7977 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIC84_RS24540 (7974) | 7974..8390 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIC84_RS24545 (8552) | 8552..10690 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| PIC84_RS24550 (11044) | 11044..11301 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| PIC84_RS24555 (11301) | 11301..11891 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| PIC84_RS24560 (12154) | 12154..13710 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| PIC84_RS24565 (13902) | 13902..14519 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| PIC84_RS24570 (14812) | 14812..15849 | - | 1038 | WP_044502555.1 | permease | - |
| PIC84_RS24575 (15954) | 15954..16277 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PIC84_RS24580 (16476) | 16476..17180 | + | 705 | WP_102204227.1 | IS6 family transposase IS15DI | Transposase |
| PIC84_RS24585 (17186) | 17186..17914 | + | 729 | WP_259638695.1 | replication initiation protein | - |
| PIC84_RS24590 (18193) | 18193..18897 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC84_RS24595 (19283) | 19283..19699 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| PIC84_RS24600 (19704) | 19704..20222 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| PIC84_RS24605 (20222) | 20222..21010 | - | 789 | WP_271287832.1 | winged helix-turn-helix domain-containing protein | - |
| PIC84_RS24610 (21030) | 21030..21455 | - | 426 | Protein_26 | TetR/AcrR family transcriptional regulator | - |
| PIC84_RS24615 (21510) | 21510..22214 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC84_RS24620 (22486) | 22486..23166 | + | 681 | Protein_28 | IS91 family transposase ISAzo26 | Transposase |
| PIC84_RS24625 (23231) | 23231..23935 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC84_RS24630 (23987) | 23987..25753 | + | 1767 | Protein_30 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PIC84_RS24635 (25832) | 25832..26836 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| PIC84_RS24640 (27108) | 27108..27194 | - | 87 | Protein_32 | Arm DNA-binding domain-containing protein | - |
| PIC84_RS24645 (27524) | 27524..28339 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PIC84_RS24650 (28400) | 28400..29203 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PIC84_RS24655 (29203) | 29203..30039 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PIC84_RS24660 (30345) | 30345..30587 | + | 243 | WP_000844627.1 | transposase | - |
| PIC84_RS24665 (30619) | 30619..31269 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PIC84_RS24670 (31375) | 31375..32574 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| PIC84_RS24675 (32541) | 32541..32729 | - | 189 | Protein_39 | IS91 family transposase | - |
| PIC84_RS24680 (32841) | 32841..33146 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| PIC84_RS24685 (33174) | 33174..34388 | - | 1215 | WP_271287834.1 | Bicyclomycin resistance protein | ARG |
| PIC84_RS24690 (34605) | 34605..35489 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| PIC84_RS24695 (35520) | 35520..37013 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PIC84_RS24700 (37224) | 37224..37448 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| PIC84_RS24705 (37445) | 37445..38182 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PIC84_RS24710 (38668) | 38668..38808 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| PIC84_RS24715 (38814) | 38814..39518 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC84_RS24720 (39644) | 39644..40399 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| PIC84_RS24725 (40569) | 40569..41429 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PIC84_RS24730 (41612) | 41612..42169 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PIC84_RS24735 (42474) | 42474..42584 | - | 111 | Protein_51 | IS6 family transposase IS15DI | Transposase |
| PIC84_RS24740 (42650) | 42650..43354 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIC84_RS24745 (43406) | 43406..44131 | + | 726 | Protein_53 | Beta-lactamase TEM | ARG |
| PIC84_RS24750 (44390) | 44390..44866 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| PIC84_RS24755 (44913) | 44913..45788 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| PIC84_RS24760 (46210) | 46210..46914 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PIC84_RS24765 (46980) | 46980..47045 | + | 66 | Protein_57 | IS1 family transposase | - |
| PIC84_RS24770 (48494) | 48494..48728 | + | 235 | Protein_58 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PIC84_RS24775 (48856) | 48856..49059 | + | 204 | Protein_59 | hypothetical protein | - |
| PIC84_RS24780 (49260) | 49260..49610 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| PIC84_RS24785 (49613) | 49613..50575 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| PIC84_RS24790 (50722) | 50722..51015 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| PIC84_RS24795 (51092) | 51092..51775 | + | 684 | WP_000085883.1 | DNA methylase | - |
| PIC84_RS24800 (51776) | 51776..51997 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| PIC84_RS24805 (52011) | 52011..52445 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| PIC84_RS24810 (52496) | 52496..53272 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| PIC84_RS24815 (53690) | 53690..54115 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| PIC84_RS24820 (54162) | 54162..54584 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| PIC84_RS24825 (54581) | 54581..54772 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| PIC84_RS24830 (55810) | 55810..56040 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PIC84_RS24835 (56092) | 56092..57453 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| PIC84_RS24840 (57500) | 57500..58063 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| PIC84_RS24845 (58149) | 58149..58610 | - | 462 | Protein_73 | hypothetical protein | - |
| PIC84_RS24850 (58912) | 58912..59439 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| PIC84_RS24855 (59497) | 59497..59730 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| PIC84_RS24860 (59791) | 59791..61814 | + | 2024 | Protein_76 | ParB/RepB/Spo0J family partition protein | - |
| PIC84_RS24865 (61883) | 61883..62317 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| PIC84_RS24870 (62314) | 62314..63076 | + | 763 | Protein_78 | plasmid SOS inhibition protein A | - |
| PIC84_RS24875 (63054) | 63054..63233 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (63045) | 63045..63269 | + | 225 | NuclAT_0 | - | - |
| - (63045) | 63045..63269 | + | 225 | NuclAT_0 | - | - |
| - (63045) | 63045..63269 | + | 225 | NuclAT_0 | - | - |
| - (63045) | 63045..63269 | + | 225 | NuclAT_0 | - | - |
| PIC84_RS24880 (63255) | 63255..63404 | + | 150 | Protein_80 | plasmid maintenance protein Mok | - |
| PIC84_RS24885 (63346) | 63346..63471 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PIC84_RS24890 (63790) | 63790..64086 | - | 297 | Protein_82 | hypothetical protein | - |
| PIC84_RS24895 (64386) | 64386..64682 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| PIC84_RS24900 (64793) | 64793..65614 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| PIC84_RS24905 (65911) | 65911..66558 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| PIC84_RS24910 (66835) | 66835..67218 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PIC84_RS24915 (67409) | 67409..68095 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| PIC84_RS24920 (68189) | 68189..68416 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| PIC84_RS24925 (68450) | 68450..68815 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| PIC84_RS24930 (68830) | 68830..69141 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PIC84_RS24935 (69163) | 69163..69729 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PIC84_RS24940 (69716) | 69716..70444 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PIC84_RS24945 (70444) | 70444..71871 | + | 1428 | WP_032297072.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PIC84_RS24950 (71861) | 71861..72451 | + | 591 | WP_064765459.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PIC84_RS24955 (72438) | 72438..72635 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| PIC84_RS24960 (72647) | 72647..72898 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| PIC84_RS24965 (72895) | 72895..73410 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PIC84_RS24970 (73545) | 73545..73766 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| PIC84_RS24975 (73926) | 73926..76553 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| PIC84_RS24980 (76550) | 76550..76936 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| PIC84_RS24985 (76933) | 76933..77565 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| PIC84_RS24990 (77562) | 77562..78554 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| PIC84_RS24995 (78581) | 78581..78889 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| PIC84_RS25000 (78952) | 78952..79473 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| PIC84_RS25005 (79500) | 79500..80138 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PIC84_RS25010 (80135) | 80135..80506 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| PIC84_RS25015 (80532) | 80532..80954 | + | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| PIC84_RS25020 (80951) | 80951..82801 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PIC84_RS25025 (82828) | 82828..83085 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| PIC84_RS25030 (83078) | 83078..83821 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PIC84_RS25035 (83982) | 83982..84218 | + | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PIC84_RS25040 (84205) | 84205..84750 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PIC84_RS25045 (84740) | 84740..85054 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| PIC84_RS25050 (85008) | 85008..85400 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| PIC84_RS25055 (85387) | 85387..86760 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| PIC84_RS25060 (86757) | 86757..89573 | + | 2817 | WP_271287830.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PIC84_RS25065 (89606) | 89606..90127 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| PIC84_RS25070 (90152) | 90152..90883 | + | 732 | WP_021559024.1 | conjugal transfer complement resistance protein TraT | - |
| PIC84_RS25075 (91086) | 91086..91823 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| PIC84_RS25080 (91874) | 91874..94126 | + | 2253 | WP_061093448.1 | type IV conjugative transfer system coupling protein TraD | - |
| PIC84_RS25085 (94126) | 94126..99396 | + | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| PIC84_RS25090 (99416) | 99416..100162 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| PIC84_RS25095 (100217) | 100217..100777 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| PIC84_RS25100 (100909) | 100909..101109 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| PIC84_RS25105 (101495) | 101495..102094 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| - (102689) | 102689..102748 | - | 60 | NuclAT_1 | - | - |
| - (102689) | 102689..102748 | - | 60 | NuclAT_1 | - | - |
| - (102689) | 102689..102748 | - | 60 | NuclAT_1 | - | - |
| - (102689) | 102689..102748 | - | 60 | NuclAT_1 | - | - |
| PIC84_RS25110 (102793) | 102793..102942 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|