MGE detailed information
MGE type: Genomic_island MGE length: 51940 bp
Accession: NZ_CP116110 Location: 1813733..1865672 Organism: Escherichia coli strain DETEC-P80 Replicon: chromosome
Accession: NZ_CP116110 Location: 1813733..1865672 Organism: Escherichia coli strain DETEC-P80 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC84_RS08765 (1809882) | 1809882..1810355 | + | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| PIC84_RS08770 (1810554) | 1810554..1811612 | + | 1059 | WP_001200892.1 | FUSC family protein | - |
| PIC84_RS08775 (1811784) | 1811784..1812113 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| PIC84_RS08780 (1812214) | 1812214..1812579 | - | 366 | WP_001282181.1 | EutP/PduV family microcompartment system protein | - |
| PIC84_RS08785 (1812850) | 1812850..1813239 | - | 390 | WP_001445118.1 | IS110 family transposase | - |
| PIC84_RS08790 (1813428) | 1813428..1813652 | - | 225 | Protein_1717 | transposase | - |
| PIC84_RS08795 (1813733) | 1813733..1814137 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| PIC84_RS08800 (1814134) | 1814134..1814481 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| PIC84_RS08805 (1814530) | 1814530..1816069 | + | 1540 | Protein_1720 | IS66 family transposase ISEc22 | Transposase |
| PIC84_RS08810 (1816500) | 1816500..1816580 | - | 81 | Protein_1721 | hypothetical protein | - |
| PIC84_RS08815 (1816680) | 1816680..1816828 | - | 149 | Protein_1722 | DUF5983 family protein | - |
| PIC84_RS08820 (1816825) | 1816825..1817202 | - | 378 | WP_000854761.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIC84_RS08825 (1817292) | 1817292..1817660 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIC84_RS08830 (1817823) | 1817823..1818044 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| PIC84_RS08835 (1818107) | 1818107..1818583 | - | 477 | WP_001186711.1 | RadC family protein | - |
| PIC84_RS08840 (1818598) | 1818598..1819071 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| PIC84_RS08845 (1819413) | 1819413..1820231 | - | 819 | WP_001234652.1 | DUF932 domain-containing protein | - |
| PIC84_RS08850 (1820349) | 1820349..1820544 | - | 196 | Protein_1729 | DUF905 family protein | - |
| PIC84_RS08855 (1820615) | 1820615..1823461 | - | 2847 | WP_000820595.1 | Ag43/Cah family autotransporter adhesin | - |
| PIC84_RS08860 (1823834) | 1823834..1824706 | - | 873 | WP_001407301.1 | GTPase family protein | - |
| PIC84_RS08865 (1824791) | 1824791..1825708 | - | 918 | WP_000250236.1 | hypothetical protein | - |
| PIC84_RS08870 (1826894) | 1826894..1827496 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| PIC84_RS08875 (1827591) | 1827591..1827797 | - | 207 | WP_000235212.1 | helix-turn-helix domain-containing protein | - |
| PIC84_RS08880 (1828537) | 1828537..1828680 | + | 144 | Protein_1735 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| PIC84_RS08885 (1829026) | 1829026..1829226 | - | 201 | WP_001297219.1 | hypothetical protein | - |
| PIC84_RS08890 (1829425) | 1829425..1829994 | + | 570 | WP_000221554.1 | inovirus Gp2 family protein | - |
| PIC84_RS08895 (1830160) | 1830160..1830552 | + | 393 | WP_001352248.1 | putative zinc ribbon protein | - |
| PIC84_RS08900 (1830562) | 1830562..1831530 | - | 969 | Protein_1739 | IS110 family transposase | - |
| PIC84_RS08905 (1831715) | 1831715..1832119 | + | 405 | WP_001221631.1 | zinc-ribbon domain-containing protein | - |
| PIC84_RS08910 (1832410) | 1832410..1833072 | + | 663 | Protein_1741 | ISL3 family transposase | - |
| PIC84_RS08915 (1833136) | 1833136..1833396 | + | 261 | Protein_1742 | IS3 family transposase ISSfl10 | Transposase |
| PIC84_RS08920 (1833406) | 1833406..1834557 | - | 1152 | WP_024176387.1 | IS30 family transposase IS30D | Transposase |
| PIC84_RS08925 (1834625) | 1834625..1834870 | - | 246 | Protein_1744 | IS3 family transposase ISEhe3 | Transposase |
| PIC84_RS08930 (1835431) | 1835431..1835619 | + | 189 | Protein_1745 | IS4 family transposase | - |
| PIC84_RS08935 (1835598) | 1835598..1835771 | + | 174 | Protein_1746 | cobalamin biosynthesis protein | - |
| PIC84_RS08940 (1835923) | 1835923..1836468 | + | 546 | WP_000973197.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| PIC84_RS08945 (1836465) | 1836465..1837208 | + | 744 | WP_001352249.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| PIC84_RS08950 (1837220) | 1837220..1838299 | + | 1080 | WP_001166154.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| PIC84_RS08955 (1838361) | 1838361..1839296 | + | 936 | WP_000986349.1 | L,D-transpeptidase | - |
| PIC84_RS08965 (1839754) | 1839754..1840671 | + | 918 | WP_001011462.1 | nitrogen assimilation transcriptional regulator NAC | - |
| PIC84_RS08970 (1840773) | 1840773..1841723 | + | 951 | WP_062887123.1 | HTH-type transcriptional regulator Cbl | - |
| PIC84_RS08980 (1841841) | 1841841..1843484 | + | 1644 | Protein_1753 | toxic metabolite efflux MATE transporter YeeO | - |
| PIC84_RS08990 (1843988) | 1843988..1844685 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| PIC84_RS08995 (1844891) | 1844891..1845607 | - | 717 | WP_000532923.1 | putative transcriptional regulatory protein YeeN | VF |
| PIC84_RS09000 (1845950) | 1845950..1847404 | - | 1455 | WP_001060229.1 | AMP nucleosidase | - |
| PIC84_RS09005 (1847506) | 1847506..1848822 | - | 1317 | WP_000378546.1 | shikimate transporter | - |
| PIC84_RS09010 (1849137) | 1849137..1850189 | + | 1053 | Protein_1758 | glycosyltransferase family 9 protein | - |
| PIC84_RS09015 (1850451) | 1850451..1857527 | - | 7077 | WP_023150057.1 | inverse autotransporter adhesin YeeJ | - |
| PIC84_RS09025 (1858017) | 1858017..1858814 | - | 798 | WP_001333886.1 | DgsA anti-repressor MtfA | - |
| PIC84_RS09035 (1859567) | 1859567..1860097 | - | 531 | Protein_1761 | cytochrome b | - |
| PIC84_RS09040 (1860441) | 1860441..1861091 | - | 651 | WP_032258253.1 | metal-binding protein ZinT | - |
| PIC84_RS09045 (1861348) | 1861348..1861983 | - | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| PIC84_RS09050 (1861984) | 1861984..1862988 | - | 1005 | WP_000740094.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| PIC84_RS09055 (1863097) | 1863097..1863510 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| PIC84_RS09060 (1863643) | 1863643..1864314 | + | 672 | WP_001339045.1 | Transcriptional regulatory protein HprR | VF |
| PIC84_RS09065 (1864314) | 1864314..1865672 | + | 1359 | WP_000826766.1 | two-component system sensor histidine kinase HprS | - |
| PIC84_RS09070 (1865780) | 1865780..1866631 | - | 852 | WP_000218214.1 | protein deglycase HchA | - |
| PIC84_RS09075 (1866890) | 1866890..1867084 | + | 195 | WP_001402296.1 | hypothetical protein | - |
| PIC84_RS09080 (1867224) | 1867224..1868297 | - | 1074 | WP_000824364.1 | porin | - |
| PIC84_RS09085 (1868948) | 1868948..1869229 | + | 282 | WP_001352255.1 | cell division protein DrpB | - |
| PIC84_RS09090 (1869269) | 1869269..1869964 | + | 696 | WP_000365580.1 | phosphohydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|