MGE detailed information
MGE type: IScluster/Tn MGE length: 10050 bp
Accession: NZ_CP116070 Location: 8518..18567 Organism: Escherichia coli strain DETEC-S792 Replicon: plasmid pDETEC45
Accession: NZ_CP116070 Location: 8518..18567 Organism: Escherichia coli strain DETEC-S792 Replicon: plasmid pDETEC45
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS27720 (PID00_27715) | 3656..4309 | + | 654 | WP_016238163.1 | ProQ/FINO family protein | - |
| PID00_RS27725 (PID00_27720) | 4377..4691 | + | 315 | WP_016238162.1 | hypothetical protein | - |
| PID00_RS27730 (PID00_27725) | 4938..5078 | - | 141 | WP_001536601.1 | colicin release lysis protein | - |
| PID00_RS27735 (PID00_27730) | 5176..5505 | - | 330 | WP_000182536.1 | colicin transporter | - |
| PID00_RS27740 (PID00_27735) | 5495..5755 | - | 261 | WP_225374575.1 | colicin E5-related ribonuclease | - |
| PID00_RS27745 (PID00_27740) | 6132..6998 | - | 867 | WP_001536599.1 | DMT family transporter | - |
| PID00_RS27750 (PID00_27745) | 6991..8058 | - | 1068 | WP_116835180.1 | hypothetical protein | - |
| PID00_RS27755 (PID00_27750) | 8518..9222 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PID00_RS27760 (PID00_27755) | 9234..9557 | - | 324 | Protein_12 | Tn3 family transposase ISEc63 | Transposase |
| PID00_RS27765 (PID00_27760) | 9658..10354 | + | 697 | WP_094110542.1 | IS1 family transposase | - |
| PID00_RS27770 (PID00_27765) | 10399..10902 | - | 504 | WP_016232763.1 | hypothetical protein | - |
| PID00_RS27775 (PID00_27770) | 11092..11796 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PID00_RS27780 (PID00_27775) | 12041..12310 | + | 270 | WP_012605119.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PID00_RS27785 (PID00_27780) | 12310..12588 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PID00_RS27790 (PID00_27785) | 12623..12781 | + | 159 | Protein_18 | 3'-5' exonuclease | - |
| PID00_RS27795 (PID00_27790) | 13062..13514 | + | 453 | WP_271290629.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| PID00_RS27800 (PID00_27795) | 13565..14839 | - | 1275 | Protein_20 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| PID00_RS27805 (PID00_27800) | 14945..16101 | + | 1157 | WP_096122008.1 | IS3 family transposase ISSd1 | Transposase |
| PID00_RS27810 (PID00_27805) | 16152..17816 | - | 1665 | Protein_22 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| PID00_RS27815 (PID00_27810) | 17977..18567 | + | 591 | WP_012605115.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| PID00_RS27820 (PID00_27815) | 18734..18904 | + | 171 | WP_012605114.1 | hypothetical protein | - |
| PID00_RS27825 (PID00_27820) | 19607..19993 | - | 387 | WP_000673985.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PID00_RS27830 (PID00_27825) | 19990..20214 | - | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PID00_RS27835 (PID00_27830) | 20695..20961 | + | 267 | WP_012605122.1 | hypothetical protein | - |
| PID00_RS27840 (PID00_27835) | 21055..21807 | - | 753 | WP_012605123.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PID00_RS27845 (PID00_27840) | 21816..22049 | - | 234 | Protein_29 | hypothetical protein | - |
| PID00_RS27850 (PID00_27845) | 22060..22947 | - | 888 | WP_016232711.1 | DMT family transporter | - |
| PID00_RS27855 (PID00_27850) | 23235..23471 | - | 237 | WP_000887751.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|