MGE detailed information
MGE type: Prophage MGE length: 50530 bp
Accession: NZ_CP116067 Location: 4021211..4071740 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Accession: NZ_CP116067 Location: 4021211..4071740 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS19860 (4019971) | 4019971..4020312 | + | 342 | WP_001219160.1 | gamma-glutamylcyclotransferase | - |
| PID00_RS19865 (4020595) | 4020595..4020735 | - | 141 | WP_016237651.1 | Hok/Gef family protein | - |
| PID00_RS19870 (4020867) | 4020867..4021169 | - | 303 | WP_032149160.1 | ogr/Delta-like zinc finger family protein | - |
| PID00_RS19875 (4021211) | 4021211..4022356 | - | 1146 | WP_016237652.1 | phage late control D family protein | - |
| PID00_RS19880 (4022510) | 4022510..4023703 | + | 1194 | WP_024194129.1 | phage tail sheath family protein | - |
| PID00_RS19885 (4023703) | 4023703..4024215 | + | 513 | WP_016237654.1 | phage major tail tube protein | - |
| PID00_RS19890 (4024267) | 4024267..4024647 | + | 381 | WP_001537179.1 | phage tail assembly protein | - |
| PID00_RS19895 (4024677) | 4024677..4024802 | + | 126 | WP_050009086.1 | GpE family phage tail protein | - |
| PID00_RS19900 (4024795) | 4024795..4027626 | + | 2832 | WP_271290484.1 | phage tail tape measure protein | - |
| PID00_RS19905 (4027638) | 4027638..4028102 | + | 465 | WP_001537176.1 | phage tail protein | - |
| PID00_RS19910 (4028138) | 4028138..4028740 | - | 603 | WP_271290485.1 | DUF4376 domain-containing protein | - |
| PID00_RS19915 (4028757) | 4028757..4030382 | - | 1626 | WP_271290486.1 | phage tail protein | - |
| PID00_RS19920 (4030379) | 4030379..4031098 | - | 720 | WP_001537172.1 | phage tail protein I | - |
| PID00_RS19925 (4031091) | 4031091..4031987 | - | 897 | WP_016232580.1 | baseplate J/gp47 family protein | - |
| PID00_RS19930 (4031974) | 4031974..4032342 | - | 369 | WP_016237658.1 | GPW/gp25 family protein | - |
| PID00_RS19935 (4032339) | 4032339..4032920 | - | 582 | WP_016237659.1 | phage baseplate assembly protein V | - |
| PID00_RS19940 (4032917) | 4032917..4033552 | - | 636 | WP_001537168.1 | phage virion morphogenesis protein | - |
| PID00_RS19945 (4033549) | 4033549..4034019 | - | 471 | WP_001537167.1 | phage tail protein | - |
| PID00_RS19950 (4034192) | 4034192..4034356 | - | 165 | WP_001537165.1 | DUF1378 family protein | - |
| PID00_RS19955 (4034421) | 4034421..4036391 | - | 1971 | WP_271290487.1 | sialate O-acetylesterase | - |
| PID00_RS19960 (4036510) | 4036510..4036944 | - | 435 | WP_016232583.1 | hypothetical protein | - |
| PID00_RS19965 (4036941) | 4036941..4037480 | - | 540 | WP_001537161.1 | lysozyme | - |
| PID00_RS19970 (4037464) | 4037464..4037754 | - | 291 | WP_001537160.1 | hypothetical protein | - |
| PID00_RS19975 (4037757) | 4037757..4037957 | - | 201 | WP_001537159.1 | tail protein X | - |
| PID00_RS19980 (4037957) | 4037957..4038451 | - | 495 | WP_032326184.1 | head completion/stabilization protein | - |
| PID00_RS19985 (4038560) | 4038560..4039369 | - | 810 | WP_032326181.1 | phage terminase small subunit | - |
| PID00_RS19990 (4039419) | 4039419..4040513 | - | 1095 | WP_271290488.1 | phage major capsid protein, P2 family | - |
| PID00_RS19995 (4040529) | 4040529..4041365 | - | 837 | WP_032326178.1 | GPO family capsid scaffolding protein | - |
| PID00_RS20000 (4041522) | 4041522..4043255 | + | 1734 | WP_115189865.1 | terminase family protein | - |
| PID00_RS20005 (4043261) | 4043261..4044304 | + | 1044 | WP_001537153.1 | phage portal protein | - |
| PID00_RS20010 (4045445) | 4045445..4045762 | - | 318 | WP_096122283.1 | single-stranded DNA-binding protein | - |
| PID00_RS20015 (4045795) | 4045795..4046133 | - | 339 | WP_001537149.1 | helix-turn-helix domain-containing protein | - |
| PID00_RS20020 (4046130) | 4046130..4046339 | - | 210 | WP_133301447.1 | hypothetical protein | - |
| PID00_RS20025 (4046349) | 4046349..4046753 | - | 405 | WP_001537147.1 | hypothetical protein | - |
| PID00_RS20030 (4046750) | 4046750..4049263 | - | 2514 | WP_271290489.1 | replication endonuclease | - |
| PID00_RS20035 (4049260) | 4049260..4049676 | - | 417 | WP_181042045.1 | hypothetical protein | - |
| PID00_RS20040 (4049663) | 4049663..4050241 | - | 579 | WP_170939153.1 | hypothetical protein | - |
| PID00_RS20045 (4050353) | 4050353..4050820 | + | 468 | WP_271290490.1 | hypothetical protein | - |
| PID00_RS20050 (4050781) | 4050781..4051143 | - | 363 | WP_016237671.1 | DUF4406 domain-containing protein | - |
| PID00_RS20055 (4051134) | 4051134..4051352 | - | 219 | WP_000613959.1 | hypothetical protein | - |
| PID00_RS20060 (4051349) | 4051349..4051585 | - | 237 | WP_016237672.1 | hypothetical protein | - |
| PID00_RS20065 (4051620) | 4051620..4052600 | - | 981 | WP_016232593.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| PID00_RS20070 (4052834) | 4052834..4053415 | - | 582 | WP_016236094.1 | 3'-5' exonuclease | - |
| PID00_RS20075 (4053415) | 4053415..4053645 | - | 231 | WP_016236093.1 | hypothetical protein | - |
| PID00_RS20080 (4053859) | 4053859..4053984 | - | 126 | WP_000021704.1 | hypothetical protein | - |
| PID00_RS20085 (4053981) | 4053981..4054223 | - | 243 | WP_000568659.1 | DUF4754 family protein | - |
| PID00_RS20090 (4054242) | 4054242..4054577 | - | 336 | WP_016237678.1 | DUF4761 family protein | - |
| PID00_RS20095 (4054603) | 4054603..4054797 | - | 195 | WP_016237836.1 | hypothetical protein | - |
| PID00_RS20100 (4054796) | 4054796..4055233 | + | 438 | WP_016237679.1 | hypothetical protein | - |
| PID00_RS20105 (4055315) | 4055315..4055740 | - | 426 | WP_001561239.1 | Cox family DNA-binding protein | - |
| PID00_RS20110 (4055848) | 4055848..4056147 | + | 300 | WP_016237680.1 | helix-turn-helix transcriptional regulator | - |
| PID00_RS20115 (4056214) | 4056214..4057209 | + | 996 | WP_001561241.1 | IS91 family transposase ISWz1 | Transposase |
| PID00_RS20120 (4057499) | 4057499..4057750 | + | 252 | WP_001223213.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| PID00_RS20125 (4057744) | 4057744..4058094 | + | 351 | WP_000239581.1 | endoribonuclease toxin ChpB | Toxin Detail |
| PID00_RS20130 (4058173) | 4058173..4058703 | - | 531 | WP_000055075.1 | inorganic diphosphatase | - |
| PID00_RS20135 (4059013) | 4059013..4059969 | + | 957 | WP_000265933.1 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| PID00_RS20140 (4060109) | 4060109..4061611 | + | 1503 | WP_096122148.1 | Fructose import ATP-binding protein FruK | VF |
| PID00_RS20145 (4061625) | 4061625..4062647 | + | 1023 | WP_001298067.1 | ABC transporter permease | - |
| PID00_RS20150 (4062634) | 4062634..4063629 | + | 996 | WP_001519233.1 | sugar ABC transporter permease YjfF | - |
| PID00_RS20155 (4063662) | 4063662..4064660 | - | 999 | WP_000853753.1 | class 1 fructose-bisphosphatase | - |
| PID00_RS20160 (4064836) | 4064836..4066209 | + | 1374 | WP_001219792.1 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | - |
| PID00_RS20165 (4066367) | 4066367..4066918 | - | 552 | WP_000166276.1 | ribosome biogenesis factor YjgA | - |
| PID00_RS20170 (4067013) | 4067013..4068365 | + | 1353 | WP_001162171.1 | metalloprotease PmbA | - |
| PID00_RS20175 (4068549) | 4068549..4068935 | + | 387 | WP_001232246.1 | cytochrome b562 | - |
| PID00_RS20180 (4068980) | 4068980..4069444 | - | 465 | WP_001106233.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| PID00_RS20185 (4069602) | 4069602..4071740 | - | 2139 | WP_000187798.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| PID00_RS20190 (4072134) | 4072134..4073789 | - | 1656 | WP_096122150.1 | alpha,alpha-phosphotrehalase | - |
| PID00_RS20195 (4073839) | 4073839..4075260 | - | 1422 | WP_001299664.1 | PTS trehalose transporter subunit IIBC | - |
| PID00_RS20200 (4075379) | 4075379..4076326 | - | 948 | WP_001181324.1 | trehalose operon repressor TreR | - |
| PID00_RS20205 (4076511) | 4076511..4076564 | + | 54 | WP_001387276.1 | mgtA regulatory leader peptide MgtL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|