MGE detailed information
MGE type: Genomic_island MGE length: 56190 bp
Accession: NZ_CP116035 Location: 4450968..4507157 Organism: Escherichia coli strain FAH Replicon: chromosome
Accession: NZ_CP116035 Location: 4450968..4507157 Organism: Escherichia coli strain FAH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGH49_RS22025 (4446407) | 4446407..4447100 | + | 694 | Protein_4310 | IS1 family transposase | - |
| PGH49_RS22030 (4447718) | 4447718..4448065 | + | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| PGH49_RS22035 (4448135) | 4448135..4449291 | + | 1157 | WP_100183773.1 | IS3 family transposase | - |
| PGH49_RS22040 (4449312) | 4449312..4449497 | + | 186 | Protein_4313 | transposase domain-containing protein | - |
| PGH49_RS22045 (4449632) | 4449632..4450960 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| PGH49_RS22050 (4450968) | 4450968..4451543 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| PGH49_RS22055 (4452096) | 4452096..4452821 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| PGH49_RS22060 (4452818) | 4452818..4454122 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| PGH49_RS22065 (4454119) | 4454119..4454871 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| PGH49_RS22070 (4454871) | 4454871..4456655 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| PGH49_RS22075 (4456787) | 4456787..4458106 | - | 1320 | WP_271293210.1 | hypothetical protein | - |
| PGH49_RS22080 (4458345) | 4458345..4458821 | - | 477 | Protein_4321 | VasL domain-containing protein | - |
| PGH49_RS22085 (4458821) | 4458821..4459165 | - | 345 | Protein_4322 | POTRA domain-containing protein | - |
| PGH49_RS22090 (4459845) | 4459845..4460036 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| PGH49_RS22095 (4460089) | 4460089..4460322 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| PGH49_RS22100 (4460418) | 4460418..4460917 | - | 500 | Protein_4325 | DNA-binding protein | - |
| PGH49_RS22105 (4461268) | 4461268..4462386 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| PGH49_RS22110 (4462526) | 4462526..4463212 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| PGH49_RS22115 (4463267) | 4463267..4464025 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| PGH49_RS22120 (4464009) | 4464009..4464734 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| PGH49_RS22125 (4464746) | 4464746..4465015 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| PGH49_RS22130 (4465043) | 4465043..4465540 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| PGH49_RS22135 (4465569) | 4465569..4466765 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| PGH49_RS22140 (4467050) | 4467050..4467331 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| PGH49_RS22145 (4467353) | 4467353..4468138 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| PGH49_RS22150 (4468199) | 4468199..4469716 | + | 1518 | WP_001773853.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| PGH49_RS22155 (4469740) | 4469740..4470039 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| PGH49_RS22160 (4470050) | 4470050..4470625 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| PGH49_RS22165 (4470674) | 4470674..4473226 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| PGH49_RS22170 (4473335) | 4473335..4474252 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| PGH49_RS22175 (4474389) | 4474389..4475294 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| PGH49_RS22180 (4475780) | 4475780..4476319 | + | 540 | WP_001332064.1 | maturase | - |
| PGH49_RS22185 (4476347) | 4476347..4476868 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| PGH49_RS22190 (4477418) | 4477418..4478680 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| PGH49_RS22195 (4478697) | 4478697..4479752 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| PGH49_RS22200 (4479881) | 4479881..4481032 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| PGH49_RS22205 (4481077) | 4481077..4481622 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| PGH49_RS22210 (4481979) | 4481979..4482323 | - | 345 | WP_001773854.1 | hypothetical protein | VF |
| PGH49_RS22215 (4482574) | 4482574..4482960 | - | 387 | WP_153782320.1 | TetR family transcriptional regulator | - |
| PGH49_RS22220 (4483066) | 4483066..4484211 | - | 1146 | Protein_4349 | Multidrug resistance protein MexB | VF |
| PGH49_RS22225 (4484314) | 4484314..4484574 | + | 261 | Protein_4350 | IS3 family transposase IS2 | Transposase |
| PGH49_RS22230 (4484566) | 4484566..4484628 | - | 63 | Protein_4351 | IS3 family transposase IS2 | Transposase |
| PGH49_RS22235 (4484757) | 4484757..4484882 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| PGH49_RS22240 (4484879) | 4484879..4485112 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| PGH49_RS22245 (4485181) | 4485181..4485756 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| PGH49_RS22250 (4486103) | 4486103..4486834 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| PGH49_RS22255 (4488287) | 4488287..4489510 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| PGH49_RS22260 (4489611) | 4489611..4490495 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| PGH49_RS22265 (4490698) | 4490698..4491378 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PGH49_RS22270 (4491526) | 4491526..4492203 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| PGH49_RS22275 (4492209) | 4492209..4492442 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| PGH49_RS22280 (4492532) | 4492532..4493350 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| PGH49_RS22285 (4493441) | 4493441..4493926 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| PGH49_RS22290 (4493942) | 4493942..4494418 | + | 477 | WP_001186786.1 | RadC family protein | - |
| PGH49_RS22295 (4494481) | 4494481..4494702 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| PGH49_RS22300 (4494865) | 4494865..4495233 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PGH49_RS22305 (4495323) | 4495323..4495697 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PGH49_RS22310 (4495694) | 4495694..4496182 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| PGH49_RS22315 (4496194) | 4496194..4496391 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| PGH49_RS22320 (4496488) | 4496488..4497057 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| PGH49_RS22325 (4497806) | 4497806..4499344 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PGH49_RS22330 (4499710) | 4499710..4501044 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PGH49_RS22335 (4501124) | 4501124..4503271 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| PGH49_RS22340 (4503330) | 4503330..4504787 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| PGH49_RS22345 (4505024) | 4505024..4506541 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| PGH49_RS22350 (4506660) | 4506660..4506833 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PGH49_RS22355 (4506861) | 4506861..4507157 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PGH49_RS22360 (4507386) | 4507386..4507658 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PGH49_RS22365 (4507670) | 4507670..4507900 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PGH49_RS22370 (4508081) | 4508081..4509712 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| PGH49_RS22375 (4509709) | 4509709..4510428 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|