MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP113503 Location: 3878479..3898833 Organism: Escherichia coli strain 16843 Replicon: chromosome
Accession: NZ_CP113503 Location: 3878479..3898833 Organism: Escherichia coli strain 16843 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OWO50_RS18595 (3873844) | 3873844..3874302 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| OWO50_RS18600 (3874563) | 3874563..3876020 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| OWO50_RS18605 (3876077) | 3876077..3876691 | - | 615 | WP_000602124.1 | peptide chain release factor H | - |
| OWO50_RS18610 (3876688) | 3876688..3877827 | - | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| OWO50_RS18615 (3878017) | 3878017..3878469 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| OWO50_RS18620 (3878479) | 3878479..3878877 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| OWO50_RS18625 (3878880) | 3878880..3879173 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| OWO50_RS18630 (3879225) | 3879225..3880280 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| OWO50_RS18635 (3880351) | 3880351..3881136 | - | 786 | WP_000207578.1 | Chemotaxis protein LafU | VF |
| OWO50_RS18640 (3881108) | 3881108..3882820 | + | 1713 | Protein_3659 | Flagellar biosynthesis protein FlhA | VF |
| OWO50_RS18645 (3882848) | 3882848..3883057 | + | 210 | WP_071778446.1 | hypothetical protein | - |
| OWO50_RS18650 (3883140) | 3883140..3883637 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| OWO50_RS18655 (3883813) | 3883813..3884562 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| OWO50_RS18660 (3884874) | 3884874..3885614 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| OWO50_RS18665 (3885585) | 3885585..3886352 | - | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| OWO50_RS18670 (3886557) | 3886557..3887135 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| OWO50_RS18675 (3887375) | 3887375..3889819 | + | 2445 | WP_000973131.1 | Acyl-coenzyme A dehydrogenase | VF |
| OWO50_RS18680 (3889862) | 3889862..3890308 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| OWO50_RS18685 (3890489) | 3890489..3891259 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| OWO50_RS18690 (3891310) | 3891310..3891504 | - | 195 | Protein_3669 | ISAs1 family transposase | - |
| OWO50_RS18695 (3891530) | 3891530..3892018 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| OWO50_RS18700 (3892112) | 3892112..3892615 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| OWO50_RS18705 (3892844) | 3892844..3893608 | - | 765 | Protein_3672 | ISAs1 family transposase | - |
| OWO50_RS18710 (3893866) | 3893866..3894156 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| OWO50_RS18715 (3894131) | 3894131..3895570 | - | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| OWO50_RS18720 (3895563) | 3895563..3896609 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| OWO50_RS18725 (3896716) | 3896716..3898698 | - | 1983 | WP_000053624.1 | Actin cross-linking toxin VgrG1 | VF |
| OWO50_RS18730 (3898919) | 3898919..3899437 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| OWO50_RS18735 (3900143) | 3900143..3900646 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| OWO50_RS18740 (3900669) | 3900669..3902153 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| OWO50_RS18745 (3902158) | 3902158..3902583 | + | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|