MGE detailed information
MGE type: Prophage MGE length: 43617 bp
Accession: NZ_CP110931 Location: 1950973..1994589 Organism: Salmonella enterica strain XM3104 Replicon: chromosome
Accession: NZ_CP110931 Location: 1950973..1994589 Organism: Salmonella enterica strain XM3104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORG44_RS09410 () | 1947246..1947887 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| ORG44_RS09415 () | 1947987..1949165 | - | 1179 | WP_000173416.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| ORG44_RS09420 () | 1949296..1949586 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| ORG44_RS09425 () | 1949654..1950007 | + | 354 | WP_001042123.1 | protein YebF | - |
| ORG44_RS09430 () | 1950101..1950760 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| ORG44_RS09435 () | 1950973..1953024 | + | 2052 | WP_000936992.1 | oligopeptidase B | - |
| ORG44_RS09440 () | 1953059..1953757 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| ORG44_RS09445 () | 1953781..1954437 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| ORG44_RS09450 () | 1954545..1954775 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| ORG44_RS09455 () | 1954913..1955287 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| ORG44_RS09460 () | 1955288..1956163 | + | 876 | WP_001540235.1 | copper homeostasis membrane protein CopD | - |
| ORG44_RS09465 () | 1956180..1956533 | + | 354 | WP_038394002.1 | YebY family protein | - |
| - | 1956635..1956778 | - | 144 | - | - | Antitoxin Detail |
| - | 1956673..1956776 | + | 104 | - | - | Toxin Detail |
| ORG44_RS09470 () | 1956907..1957557 | - | 651 | Protein_1849 | hypothetical protein ; Integrase | Integrase |
| ORG44_RS09475 () | 1957580..1957873 | + | 294 | WP_001540231.1 | hypothetical protein | - |
| ORG44_RS09480 () | 1957827..1958033 | + | 207 | Protein_1851 | phage tail protein | - |
| ORG44_RS09485 () | 1958205..1958360 | + | 156 | Protein_1852 | phage tail protein | - |
| ORG44_RS09490 () | 1958466..1958798 | + | 333 | WP_031606598.1 | DUF1353 domain-containing protein | - |
| ORG44_RS09495 () | 1958847..1958956 | + | 110 | Protein_1854 | tail fiber assembly protein | - |
| ORG44_RS09500 () | 1959476..1959571 | - | 96 | WP_024133706.1 | hypothetical protein | - |
| ORG44_RS09505 () | 1959669..1960438 | - | 770 | Protein_1856 | transporter substrate-binding domain-containing protein | - |
| ORG44_RS09510 () | 1960514..1960606 | + | 93 | Protein_1857 | DUF4113 domain-containing protein | - |
| ORG44_RS09515 () | 1960929..1961057 | + | 129 | Protein_1858 | helix-turn-helix domain-containing protein | - |
| ORG44_RS09520 () | 1961086..1961886 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| ORG44_RS09525 () | 1962820..1963128 | - | 309 | Protein_1860 | hypothetical protein ; Integrase | Integrase |
| ORG44_RS09530 () | 1963094..1963375 | - | 282 | WP_023235012.1 | recombinase RecT | - |
| ORG44_RS09535 () | 1963389..1963541 | - | 153 | Protein_1862 | recombinase RecT | - |
| ORG44_RS09540 () | 1963490..1963600 | + | 111 | Protein_1863 | replication protein | - |
| ORG44_RS09545 () | 1963614..1964009 | + | 396 | WP_000089408.1 | DUF977 family protein | - |
| ORG44_RS09550 () | 1964296..1965426 | - | 1131 | WP_000529518.1 | GGDEF domain-containing protein | - |
| ORG44_RS09555 () | 1965822..1967801 | + | 1980 | WP_023235011.1 | alkyl sulfatase dimerization domain-containing protein | - |
| ORG44_RS09560 () | 1968210..1968824 | - | 615 | WP_000848070.1 | disulfide bond formation protein B | - |
| ORG44_RS09565 () | 1968834..1968992 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| ORG44_RS09570 () | 1969125..1970039 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| ORG44_RS09575 () | 1970830..1971393 | - | 564 | Protein_1870 | fimbrial protein | - |
| ORG44_RS09580 () | 1971383..1971557 | + | 175 | Protein_1871 | DUF4113 domain-containing protein | - |
| ORG44_RS09585 () | 1971973..1972395 | - | 423 | Protein_1872 | tyrosine-type recombinase/integrase | - |
| ORG44_RS09590 () | 1972549..1973338 | + | 790 | Protein_1873 | IS256 family transposase IS285 | Transposase |
| ORG44_RS09595 () | 1973301..1973447 | + | 147 | WP_001542139.1 | IS256 family transposase ISEc39 | Transposase |
| ORG44_RS09600 () | 1973784..1973924 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| ORG44_RS09605 () | 1974090..1974359 | - | 270 | WP_012664556.1 | hypothetical protein | - |
| ORG44_RS09610 () | 1974729..1975148 | + | 420 | WP_000354401.1 | GNAT family N-acetyltransferase | - |
| ORG44_RS09615 () | 1975521..1975997 | - | 477 | WP_000030946.1 | hypothetical protein | - |
| ORG44_RS09620 () | 1976325..1976720 | - | 396 | WP_000422891.1 | DUF1398 domain-containing protein | - |
| ORG44_RS09625 () | 1977404..1978126 | + | 723 | WP_000182074.1 | Guanine nucleotide exchange factor sopE2 | VF |
| ORG44_RS09630 () | 1978411..1978575 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| ORG44_RS09635 () | 1978798..1979448 | + | 651 | WP_001540211.1 | protein-serine/threonine phosphatase | - |
| ORG44_RS09640 () | 1979467..1979658 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| ORG44_RS09645 () | 1979768..1980004 | - | 237 | WP_024131167.1 | YebV family protein | - |
| ORG44_RS09650 () | 1980122..1981561 | - | 1440 | WP_001540209.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| ORG44_RS09655 () | 1981639..1984272 | - | 2634 | WP_024148654.1 | Intermembrane transport protein YebT | VF |
| ORG44_RS09660 () | 1984241..1985524 | - | 1284 | WP_001207290.1 | membrane integrity lipid transport subunit YebS | - |
| ORG44_RS09665 () | 1985653..1986150 | + | 498 | WP_023235004.1 | GAF domain-containing protein | - |
| ORG44_RS09670 () | 1986248..1986934 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| ORG44_RS09675 () | 1986954..1989002 | + | 2049 | WP_001091234.1 | carboxy terminal-processing peptidase | - |
| ORG44_RS09680 () | 1989196..1990077 | + | 882 | WP_000984498.1 | protease HtpX | - |
| ORG44_RS09685 () | 1990125..1991498 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| ORG44_RS09690 () | 1991674..1992465 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| ORG44_RS09695 () | 1992677..1992916 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| ORG44_RS09700 () | 1993074..1993217 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| ORG44_RS09705 () | 1993288..1993575 | + | 288 | WP_001000660.1 | YebO family protein | - |
| ORG44_RS09710 () | 1994224..1994367 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| ORG44_RS09715 () | 1994380..1994589 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| ORG44_RS09720 () | 1994809..1996554 | + | 1746 | WP_023235002.1 | peptidoglycan glycosyltransferase FtsI | - |
| ORG44_RS09725 () | 1996619..1997428 | + | 810 | WP_000010924.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| ORG44_RS09730 () | 1997425..1997991 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| ORG44_RS09735 () | 1998401..1998859 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|