MGE detailed information
MGE type: Genomic_island MGE length: 8190 bp
Accession: NZ_CP110362 Location: 4512962..4521151 Organism: Dickeya dadantii strain XJ12 Replicon: chromosome
Accession: NZ_CP110362 Location: 4512962..4521151 Organism: Dickeya dadantii strain XJ12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OL445_RS20320 | 4509959..4510189 | - | 231 | WP_284602632.1 | DNA polymerase III subunit theta | - |
| OL445_RS20325 | 4510351..4510731 | + | 381 | WP_284602633.1 | copper homeostasis periplasmic binding protein CopC | - |
| OL445_RS20330 | 4510735..4511613 | + | 879 | WP_284602635.1 | copper homeostasis membrane protein CopD | - |
| OL445_RS20335 | 4511901..4512410 | + | 510 | WP_013317823.1 | non-heme ferritin | - |
| OL445_RS20340 | 4512962..4513702 | + | 741 | WP_038911164.1 | DNA/RNA non-specific endonuclease | - |
| OL445_RS20345 | 4514066..4515208 | - | 1143 | WP_038901137.1 | hypothetical protein | VF |
| OL445_RS20350 | 4515201..4516298 | - | 1098 | WP_284602638.1 | HDOD domain-containing protein | - |
| OL445_RS20355 | 4516289..4517404 | - | 1116 | WP_013317829.1 | ATP-binding protein | - |
| OL445_RS20360 | 4517397..4518521 | - | 1125 | WP_161450465.1 | FIST N-terminal domain-containing protein | - |
| - | 4519171..4519253 | + | 83 | - | - | Antitoxin Detail |
| - | 4519173..4519253 | - | 81 | - | - | Toxin Detail |
| OL445_RS20365 | 4519423..4519761 | - | 339 | WP_013317831.1 | YebY family protein | - |
| OL445_RS20370 | 4520147..4520563 | + | 417 | WP_249622066.1 | hypothetical protein | - |
| OL445_RS20375 | 4520903..4521151 | + | 249 | WP_013317833.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| OL445_RS20380 | 4521262..4523004 | - | 1743 | WP_284602645.1 | ABC transporter permease subunit | - |
| OL445_RS20385 | 4523001..4524521 | - | 1521 | WP_284602646.1 | ABC transporter substrate-binding protein | - |
| OL445_RS20390 | 4524542..4525357 | - | 816 | WP_284602648.1 | dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|