MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57070 bp
Accession: NZ_CP110302 Location: 1..57070 Organism: Xanthomonas citri pv. fuscans strain CFBP 6533 Replicon: plasmid pA
Accession: NZ_CP110302 Location: 1..57070 Organism: Xanthomonas citri pv. fuscans strain CFBP 6533 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM953_RS21980 (OM953_21980) | 1..636 | + | 636 | WP_039572177.1 | ParA family partition ATPase | - |
| OM953_RS21985 (OM953_21985) | 633..968 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| OM953_RS21990 (OM953_21990) | 1212..1676 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| OM953_RS21995 (OM953_21995) | 1681..2277 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| OM953_RS22000 (OM953_22000) | 2270..2860 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| OM953_RS22005 (OM953_22005) | 3147..6101 | + | 2955 | WP_227479506.1 | hypothetical protein | Relaxase |
| OM953_RS22010 (OM953_22010) | 6169..8157 | + | 1989 | WP_227479507.1 | Conjugal transfer protein TraG | VF |
| OM953_RS22015 (OM953_22015) | 8154..8645 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| OM953_RS22020 (OM953_22020) | 8678..9217 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM953_RS22025 (OM953_22025) | 9383..9694 | - | 312 | WP_099802907.1 | hypothetical protein | - |
| OM953_RS22030 (OM953_22030) | 9726..10952 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| OM953_RS22035 (OM953_22035) | 11334..11780 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| OM953_RS22040 (OM953_22040) | 11923..12312 | + | 390 | WP_039587855.1 | hypothetical protein | - |
| OM953_RS22045 (OM953_22045) | 12888..13706 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| OM953_RS22050 (OM953_22050) | 14409..14618 | + | 210 | WP_017164018.1 | helix-turn-helix transcriptional regulator | - |
| OM953_RS22055 (OM953_22055) | 14703..15707 | + | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| OM953_RS22060 (OM953_22060) | 15782..16102 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| OM953_RS22065 (OM953_22065) | 16105..16371 | + | 267 | WP_227479455.1 | VirB3 family type IV secretion system protein | - |
| OM953_RS22070 (OM953_22070) | 16438..19008 | + | 2571 | WP_039570074.1 | DUF853 family protein | - |
| OM953_RS22075 (OM953_22075) | 19027..19800 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| OM953_RS22080 (OM953_22080) | 19797..20150 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| OM953_RS22085 (OM953_22085) | 20368..21846 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| OM953_RS22090 (OM953_22090) | 21853..22563 | + | 711 | WP_039574290.1 | conjugal transfer protein TrbF | - |
| OM953_RS22095 (OM953_22095) | 22590..23582 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| OM953_RS22100 (OM953_22100) | 23598..24950 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| OM953_RS22105 (OM953_22105) | 25141..25329 | + | 189 | WP_228329193.1 | hypothetical protein | - |
| OM953_RS22110 (OM953_22110) | 25340..25579 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| OM953_RS22115 (OM953_22115) | 25652..25900 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| OM953_RS22120 (OM953_22120) | 25902..26756 | + | 855 | WP_022557737.1 | DNA topoisomerase | - |
| OM953_RS22125 (OM953_22125) | 27131..28450 | + | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| OM953_RS22130 (OM953_22130) | 28577..29869 | + | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| OM953_RS22135 (OM953_22135) | 30024..30572 | + | 549 | WP_022557734.1 | DNA topoisomerase | - |
| OM953_RS22140 (OM953_22140) | 30621..30758 | + | 138 | Protein_32 | IS3 family transposase ISXcd1 | Transposase |
| OM953_RS22145 (OM953_22145) | 30833..31387 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM953_RS22150 (OM953_22150) | 31401..31817 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OM953_RS22155 (OM953_22155) | 31814..32068 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| OM953_RS22160 (OM953_22160) | 32280..32873 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| OM953_RS22165 (OM953_22165) | 32870..35899 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| OM953_RS22170 (OM953_22170) | 35932..36890 | + | 959 | Protein_38 | IS3 family transposase ISXcd1 | Transposase |
| OM953_RS22175 (OM953_22175) | 36980..37228 | + | 249 | WP_042826723.1 | hypothetical protein | - |
| OM953_RS22180 (OM953_22180) | 38512..39564 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| OM953_RS22185 (OM953_22185) | 39699..39803 | - | 105 | Protein_41 | type III secretion system effector protein | - |
| OM953_RS22190 (OM953_22190) | 40486..41400 | + | 915 | WP_022557729.1 | hypothetical protein | - |
| OM953_RS22195 (OM953_22195) | 41393..42250 | + | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| OM953_RS22200 (OM953_22200) | 42429..42890 | + | 462 | WP_039731445.1 | hypothetical protein | - |
| OM953_RS22205 (OM953_22205) | 42931..43497 | + | 567 | WP_022557726.1 | hypothetical protein | - |
| OM953_RS22210 (OM953_22210) | 43646..44119 | + | 474 | WP_234346901.1 | hypothetical protein | - |
| OM953_RS22215 (OM953_22215) | 44156..44764 | - | 609 | WP_040965625.1 | hypothetical protein | - |
| OM953_RS22220 (OM953_22220) | 46086..46409 | + | 324 | WP_022557721.1 | hypothetical protein | - |
| OM953_RS22225 (OM953_22225) | 46969..47244 | + | 276 | WP_022557719.1 | hypothetical protein | - |
| OM953_RS22230 (OM953_22230) | 47823..48221 | + | 399 | WP_039731964.1 | hypothetical protein | - |
| OM953_RS22235 (OM953_22235) | 48348..48719 | + | 372 | WP_022557717.1 | hypothetical protein | - |
| OM953_RS22240 (OM953_22240) | 48786..52802 | - | 4017 | WP_264684752.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| OM953_RS22245 (OM953_22245) | 53059..53331 | + | 273 | WP_022557754.1 | hypothetical protein | - |
| OM953_RS22250 (OM953_22250) | 53383..53610 | + | 228 | WP_022557753.1 | hypothetical protein | - |
| OM953_RS22255 (OM953_22255) | 53838..54182 | + | 345 | WP_022557752.1 | hypothetical protein | - |
| OM953_RS22260 (OM953_22260) | 54294..54878 | + | 585 | WP_022557751.1 | DUF6012 family protein | - |
| OM953_RS22265 (OM953_22265) | 55232..56053 | + | 822 | WP_099802905.1 | hypothetical protein | - |
| OM953_RS22270 (OM953_22270) | 56661..56999 | - | 339 | WP_099859120.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|