MGE detailed information
MGE type: Prophage MGE length: 22834 bp
Accession: NZ_CP109897 Location: 446028..468861 Organism: Xylella fastidiosa subsp. fastidiosa strain XYL461 Replicon: chromosome
Accession: NZ_CP109897 Location: 446028..468861 Organism: Xylella fastidiosa subsp. fastidiosa strain XYL461 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK116_RS02025 (OK116_02020) | 441400..443190 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| OK116_RS02030 (OK116_02025) | 443211..443996 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| OK116_RS02035 (OK116_02030) | 444117..444365 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| OK116_RS02040 (OK116_02035) | 444388..444768 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| OK116_RS02045 (OK116_02040) | 444794..446035 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| OK116_RS02050 (OK116_02045) | 446028..446750 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| OK116_RS02055 (OK116_02050) | 447098..449575 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| OK116_RS02060 (OK116_02055) | 449560..450222 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| OK116_RS02065 (OK116_02060) | 450227..450664 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| OK116_RS02070 (OK116_02065) | 450682..452430 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| OK116_RS02075 (OK116_02070) | 452427..453446 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| OK116_RS02080 (OK116_02075) | 453853..454554 | - | 702 | WP_228446162.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| OK116_RS02085 (OK116_02080) | 454472..455443 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| OK116_RS02090 (OK116_02085) | 455451..456008 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| OK116_RS02095 (OK116_02090) | 456001..456894 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK116_RS02100 (OK116_02095) | 456894..457256 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK116_RS02105 (OK116_02100) | 457430..457711 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK116_RS02110 (OK116_02105) | 457722..457997 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OK116_RS02115 (OK116_02110) | 458085..458387 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| OK116_RS02120 (OK116_02115) | 458390..458791 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| OK116_RS02125 (OK116_02120) | 458860..459447 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| OK116_RS02130 (OK116_02125) | 459444..459986 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK116_RS02135 (OK116_02130) | 459962..460483 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| OK116_RS02140 (OK116_02135) | 460480..460803 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| OK116_RS02145 (OK116_02140) | 460803..461063 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| OK116_RS02150 (OK116_02145) | 461081..462955 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| OK116_RS02155 (OK116_02150) | 462952..463584 | - | 633 | WP_011097618.1 | phage portal protein | - |
| OK116_RS02160 (OK116_02155) | 463581..463811 | - | 231 | WP_228446163.1 | hypothetical protein | - |
| OK116_RS02165 (OK116_02160) | 463800..464099 | + | 300 | WP_228446164.1 | hypothetical protein | - |
| OK116_RS02170 (OK116_02165) | 464096..464374 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| OK116_RS02175 (OK116_02170) | 464376..464684 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| OK116_RS02180 (OK116_02175) | 464769..466187 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| OK116_RS02185 (OK116_02180) | 466184..466438 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| OK116_RS02190 (OK116_02185) | 466428..467447 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK116_RS02195 (OK116_02190) | 468220..468861 | + | 642 | WP_011097625.1 | hypothetical protein | VF |
| OK116_RS02200 (OK116_02195) | 468889..469365 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| OK116_RS02205 (OK116_02200) | 469370..469942 | + | 573 | WP_011097627.1 | YceI family protein | - |
| OK116_RS02210 (OK116_02205) | 469939..471897 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| OK116_RS02215 (OK116_02215) | 472830..473219 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|