MGE detailed information
MGE type: Prophage MGE length: 23914 bp
Accession: NZ_CP109891 Location: 445674..469587 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Accession: NZ_CP109891 Location: 445674..469587 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK113_RS01810 (OK113_01810) | 441046..442836 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| OK113_RS01815 (OK113_01815) | 442857..443642 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| OK113_RS01820 (OK113_01820) | 443763..444011 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| OK113_RS01825 (OK113_01825) | 444034..444414 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| OK113_RS01830 (OK113_01830) | 444440..445681 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| OK113_RS01835 (OK113_01835) | 445674..446396 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| OK113_RS01840 (OK113_01840) | 446744..449221 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| OK113_RS01845 (OK113_01845) | 449206..449868 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| OK113_RS01850 (OK113_01850) | 449873..450310 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| OK113_RS01855 (OK113_01855) | 450328..452076 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| OK113_RS01860 (OK113_01860) | 452073..453092 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| OK113_RS01865 (OK113_01865) | 453499..454188 | - | 690 | WP_012382453.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| OK113_RS01870 (OK113_01870) | 454118..455089 | - | 972 | WP_159241593.1 | hypothetical protein | - |
| OK113_RS01875 (OK113_01875) | 455097..455654 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| OK113_RS01880 (OK113_01880) | 455647..456540 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK113_RS01885 (OK113_01885) | 456540..456902 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK113_RS01890 (OK113_01890) | 457076..457357 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK113_RS01895 (OK113_01895) | 457368..457643 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OK113_RS01900 (OK113_01900) | 457731..458033 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| OK113_RS01905 (OK113_01905) | 458036..458437 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| OK113_RS01910 (OK113_01910) | 458506..459093 | - | 588 | WP_004090703.1 | phage baseplate assembly protein V | - |
| OK113_RS01915 (OK113_01915) | 459090..459632 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK113_RS01920 (OK113_01920) | 459608..460129 | - | 522 | WP_057683415.1 | hypothetical protein | - |
| OK113_RS01925 (OK113_01925) | 460126..460449 | - | 324 | WP_038233035.1 | hypothetical protein | - |
| OK113_RS01930 (OK113_01930) | 460449..460709 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| OK113_RS01935 (OK113_01935) | 460727..462601 | - | 1875 | WP_140161485.1 | phage major capsid protein | - |
| OK113_RS01940 (OK113_01940) | 462585..463229 | - | 645 | WP_038232805.1 | phage portal protein | - |
| OK113_RS01945 (OK113_01945) | 463280..463744 | + | 465 | WP_236641875.1 | hypothetical protein | - |
| OK113_RS01950 (OK113_01950) | 463744..464019 | + | 276 | WP_228446165.1 | VRR-NUC domain-containing protein | - |
| OK113_RS01955 (OK113_01955) | 464021..464329 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| OK113_RS01960 (OK113_01960) | 464414..465832 | + | 1419 | WP_126709119.1 | DEAD/DEAH box helicase | - |
| OK113_RS01965 (OK113_01965) | 465829..466083 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| OK113_RS01970 (OK113_01970) | 466073..467092 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK113_RS01975 (OK113_01975) | 467865..468506 | + | 642 | WP_011097625.1 | hypothetical protein | VF |
| OK113_RS01980 (OK113_01980) | 468534..469010 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| OK113_RS01985 (OK113_01985) | 469015..469587 | + | 573 | WP_011097627.1 | YceI family protein | - |
| OK113_RS01990 (OK113_01990) | 469584..471542 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| OK113_RS01995 (OK113_01995) | 472475..472864 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|