MGE detailed information
MGE type: Conjugative plasmid MGE length: 97817 bp
Accession: NZ_CP107011 Location: 1..97817 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: plasmid pSZB23-1
Accession: NZ_CP107011 Location: 1..97817 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: plasmid pSZB23-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF884_RS22590 (455) | 455..1486 | + | 1032 | WP_263587409.1 | plasmid replication initiator RepA | - |
| OF884_RS22595 (2509) | 2509..3717 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| OF884_RS22600 (3698) | 3698..3970 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| OF884_RS22605 (4185) | 4185..5000 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| OF884_RS22610 (5087) | 5087..5329 | + | 243 | Protein_4 | phosphoglucosamine mutase | - |
| OF884_RS22615 (5565) | 5565..6710 | - | 1146 | Protein_5 | IS91 family transposase ISVsa3 | Transposase |
| OF884_RS22620 (7068) | 7068..7337 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| OF884_RS22625 (7337) | 7337..7615 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| OF884_RS22630 (7655) | 7655..8503 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| OF884_RS22635 (8620) | 8620..9093 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| OF884_RS22640 (9570) | 9570..9836 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| OF884_RS22645 (9836) | 9836..10330 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| OF884_RS22650 (10386) | 10386..10988 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| OF884_RS22655 (11342) | 11342..12688 | + | 1347 | WP_001132032.1 | protein YagA | - |
| OF884_RS22660 (12967) | 12967..14520 | + | 1554 | WP_171869955.1 | colicin Ia central receptor-binding domain-containing protein | - |
| OF884_RS22665 (14673) | 14673..15935 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| OF884_RS22670 (16185) | 16185..17060 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| OF884_RS22675 (17095) | 17095..18063 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| OF884_RS22680 (18120) | 18120..19217 | + | 1098 | Protein_18 | TonB-dependent receptor | - |
| OF884_RS22685 (19285) | 19285..19650 | + | 366 | Protein_19 | colicin-like pore-forming protein | - |
| OF884_RS22690 (19672) | 19672..20007 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| OF884_RS22695 (20136) | 20136..20483 | + | 348 | WP_016231295.1 | DUF6404 family protein | - |
| OF884_RS22700 (20503) | 20503..21093 | - | 591 | WP_024227072.1 | hypothetical protein | - |
| OF884_RS22705 (21093) | 21093..21350 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| OF884_RS22710 (21919) | 21919..22332 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| OF884_RS22715 (22334) | 22334..23113 | + | 780 | WP_024227071.1 | site-specific integrase | - |
| OF884_RS22720 (23294) | 23294..23938 | + | 645 | WP_001144036.1 | ParA family protein | - |
| OF884_RS22725 (24025) | 24025..24333 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| OF884_RS22730 (24747) | 24747..25727 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| OF884_RS22735 (25720) | 25720..26136 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| OF884_RS22740 (26138) | 26138..27401 | - | 1264 | Protein_30 | translesion error-prone DNA polymerase V subunit UmuC | - |
| OF884_RS22745 (27401) | 27401..27838 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OF884_RS22750 (27835) | 27835..28083 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| OF884_RS22755 (28477) | 28477..29403 | + | 927 | WP_024227070.1 | DUF1281 domain-containing protein | - |
| OF884_RS22760 (29400) | 29400..29711 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| OF884_RS22765 (29787) | 29787..30470 | + | 684 | WP_171869954.1 | DNA methylase | - |
| OF884_RS22770 (30471) | 30471..30692 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| OF884_RS22775 (30673) | 30673..31140 | + | 468 | WP_223230041.1 | DUF1380 family protein | - |
| OF884_RS22780 (31185) | 31185..31955 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| OF884_RS22785 (32374) | 32374..32799 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| OF884_RS22790 (32846) | 32846..33268 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| OF884_RS22795 (33265) | 33265..33456 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| OF884_RS22800 (34226) | 34226..34753 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| OF884_RS22805 (34811) | 34811..35044 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| OF884_RS22810 (35103) | 35103..37061 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| OF884_RS22815 (37116) | 37116..37550 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| OF884_RS22820 (37547) | 37547..38266 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| OF884_RS22825 (38263) | 38263..38859 | + | 597 | WP_219396298.1 | hypothetical protein | - |
| OF884_RS22830 (39322) | 39322..39822 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| OF884_RS22835 (40551) | 40551..40985 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| OF884_RS22840 (41077) | 41077..41343 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| OF884_RS22845 (41408) | 41408..42349 | + | 942 | WP_000038339.1 | ISNCY family transposase ISSen7 | VF |
| OF884_RS22850 (42411) | 42411..42581 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| OF884_RS22855 (42612) | 42612..42863 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| OF884_RS22860 (43443) | 43443..44291 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| OF884_RS22865 (44376) | 44376..44711 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| OF884_RS22870 (44945) | 44945..45277 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| OF884_RS22875 (45288) | 45288..47987 | + | 2700 | WP_024143648.1 | hypothetical protein | Relaxase |
| OF884_RS22880 (48024) | 48024..50315 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| OF884_RS22885 (50308) | 50308..51378 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| OF884_RS22890 (51397) | 51397..52605 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (52785) | 52785..52842 | - | 58 | NuclAT_0 | - | - |
| - (52785) | 52785..52842 | - | 58 | NuclAT_0 | - | - |
| - (52785) | 52785..52842 | - | 58 | NuclAT_0 | - | - |
| - (52785) | 52785..52842 | - | 58 | NuclAT_0 | - | - |
| OF884_RS22895 (52897) | 52897..53049 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| OF884_RS22900 (53121) | 53121..53372 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| OF884_RS22905 (53734) | 53734..53966 | + | 233 | Protein_63 | hypothetical protein | - |
| OF884_RS22910 (54031) | 54031..54207 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| OF884_RS22915 (54599) | 54599..54808 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| OF884_RS22920 (54880) | 54880..55530 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| OF884_RS22925 (55604) | 55604..57772 | - | 2169 | WP_021265679.1 | DotA/TraY family protein | - |
| OF884_RS22930 (57869) | 57869..58453 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| OF884_RS22935 (58482) | 58482..59684 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| OF884_RS22940 (59651) | 59651..60265 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| OF884_RS22945 (60265) | 60265..63309 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| OF884_RS22950 (63399) | 63399..64199 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| OF884_RS22955 (64183) | 64183..64371 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| OF884_RS22960 (64435) | 64435..64839 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| OF884_RS22965 (64890) | 64890..65417 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| OF884_RS22970 (65417) | 65417..66121 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| OF884_RS22975 (66121) | 66121..67410 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| OF884_RS22980 (67413) | 67413..68396 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| OF884_RS22985 (68407) | 68407..69099 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| OF884_RS22990 (69096) | 69096..69443 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| OF884_RS22995 (69461) | 69461..73228 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| OF884_RS23000 (73317) | 73317..73868 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| OF884_RS23005 (73883) | 73883..74173 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| OF884_RS23010 (74170) | 74170..75318 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| OF884_RS23015 (75315) | 75315..76133 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| OF884_RS23020 (76130) | 76130..76588 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| OF884_RS23025 (76983) | 76983..77567 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| OF884_RS23030 (77627) | 77627..78829 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| OF884_RS23035 (78914) | 78914..79738 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| OF884_RS23040 (79889) | 79889..81043 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| OF884_RS23045 (81815) | 81815..83239 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| OF884_RS23050 (83239) | 83239..83895 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| OF884_RS23055 (83880) | 83880..84440 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| OF884_RS23060 (84450) | 84450..85064 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| OF884_RS23065 (85082) | 85082..86179 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| OF884_RS23070 (86192) | 86192..87745 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| OF884_RS23075 (87756) | 87756..88208 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| OF884_RS23080 (88195) | 88195..89490 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| OF884_RS23085 (89483) | 89483..91165 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| OF884_RS23090 (91179) | 91179..91616 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| OF884_RS23095 (91616) | 91616..92683 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| OF884_RS23100 (93307) | 93307..93603 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| OF884_RS23105 (93779) | 93779..94033 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| OF884_RS23110 (94195) | 94195..94746 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| OF884_RS23115 (94919) | 94919..95602 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| OF884_RS23120 (95856) | 95856..96389 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| OF884_RS23125 (96831) | 96831..97118 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| OF884_RS23130 (97036) | 97036..97266 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|