MGE detailed information
MGE type: Prophage MGE length: 38328 bp
Accession: NZ_CP107010 Location: 1862748..1901075 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Accession: NZ_CP107010 Location: 1862748..1901075 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF884_RS08795 (1858446) | 1858446..1859903 | + | 1458 | WP_001669456.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| OF884_RS08805 (1860773) | 1860773..1862227 | + | 1455 | WP_000428184.1 | AMP nucleosidase | - |
| OF884_RS08810 (1862748) | 1862748..1862921 | - | 174 | WP_000957535.1 | hypothetical protein | - |
| OF884_RS08815 (1862969) | 1862969..1863073 | + | 105 | Protein_1727 | DUF520 family protein | - |
| OF884_RS08820 (1863131) | 1863131..1864861 | - | 1731 | WP_000669124.1 | hypothetical protein | - |
| OF884_RS08825 (1864918) | 1864918..1866612 | - | 1695 | WP_077906259.1 | hypothetical protein | VF |
| OF884_RS08830 (1867296) | 1867296..1867574 | - | 279 | Protein_1730 | transposase | - |
| OF884_RS08835 (1867660) | 1867660..1868127 | - | 468 | Protein_1731 | integrase domain-containing protein | - |
| OF884_RS08840 (1868602) | 1868602..1869126 | - | 525 | WP_001219018.1 | hypothetical protein | - |
| OF884_RS08850 (1869786) | 1869786..1870091 | - | 306 | Protein_1733 | Arm DNA-binding domain-containing protein | - |
| OF884_RS08855 (1870507) | 1870507..1871037 | + | 531 | WP_162989093.1 | hypothetical protein | - |
| OF884_RS08860 (1871177) | 1871177..1872577 | + | 1401 | WP_000370761.1 | hypothetical protein | - |
| OF884_RS08865 (1872570) | 1872570..1873343 | + | 774 | WP_000137444.1 | chromosome partition protein MukE | - |
| OF884_RS08870 (1873340) | 1873340..1877923 | + | 4584 | WP_023210261.1 | chromosome partition protein MukB | - |
| OF884_RS08875 (1877923) | 1877923..1878897 | + | 975 | WP_000548605.1 | DUF2220 family protein | - |
| OF884_RS08880 (1879010) | 1879010..1879786 | + | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| OF884_RS08885 (1879783) | 1879783..1880352 | + | 570 | WP_000977357.1 | hypothetical protein | - |
| OF884_RS08890 (1880345) | 1880345..1883737 | + | 3393 | WP_001000563.1 | UvrD-helicase domain-containing protein | - |
| OF884_RS08895 (1883825) | 1883825..1884580 | + | 756 | WP_001089671.1 | multiubiquitin domain-containing protein | - |
| OF884_RS08900 (1884555) | 1884555..1885739 | + | 1185 | WP_000078712.1 | ThiF family adenylyltransferase | - |
| OF884_RS08905 (1885733) | 1885733..1886197 | + | 465 | WP_023210260.1 | DUF6527 family protein | - |
| OF884_RS08910 (1886574) | 1886574..1887041 | + | 468 | WP_000201258.1 | hypothetical protein | - |
| OF884_RS08915 (1887041) | 1887041..1887259 | + | 219 | WP_161976074.1 | cell morphology transcriptional regulator XreR2 | - |
| OF884_RS08920 (1887756) | 1887756..1888109 | + | 354 | WP_000269841.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OF884_RS08925 (1888114) | 1888114..1888416 | + | 303 | WP_023210258.1 | XRE family transcriptional regulator | Antitoxin Detail |
| OF884_RS08930 (1888922) | 1888922..1889806 | + | 885 | WP_023210257.1 | hypothetical protein ; Integrase | Integrase |
| OF884_RS08935 (1890675) | 1890675..1891937 | - | 1263 | WP_000058784.1 | Prophage integrase IntA ; Integrase | Integrase |
| OF884_RS08945 (1892275) | 1892275..1893072 | - | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| OF884_RS08955 (1893553) | 1893553..1893714 | + | 162 | WP_000500830.1 | hypothetical protein | - |
| OF884_RS08960 (1893841) | 1893841..1894260 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OF884_RS08965 (1894263) | 1894263..1895531 | + | 1269 | WP_000457663.1 | Y-family DNA polymerase | - |
| OF884_RS08970 (1895986) | 1895986..1896198 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| OF884_RS08975 (1896209) | 1896209..1896397 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| OF884_RS08980 (1896657) | 1896657..1897835 | - | 1179 | WP_001080668.1 | Outer membrane porin N | VF |
| OF884_RS08985 (1898485) | 1898485..1898784 | + | 300 | WP_000107432.1 | cell division protein DrpB | - |
| OF884_RS08990 (1898876) | 1898876..1899571 | + | 696 | WP_000377042.1 | phosphohydrolase | - |
| OF884_RS08995 (1899645) | 1899645..1901075 | + | 1431 | WP_001157315.1 | DNA cytosine methyltransferase | - |
| OF884_RS09000 (1901056) | 1901056..1901526 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| OF884_RS09005 (1901515) | 1901515..1902435 | - | 921 | WP_001212262.1 | drug/metabolite exporter YedA | - |
| OF884_RS09010 (1902605) | 1902605..1903522 | + | 918 | WP_085920526.1 | DUF808 domain-containing protein | - |
| OF884_RS09015 (1903599) | 1903599..1903783 | + | 185 | Protein_1764 | DUF2158 domain-containing protein | - |
| OF884_RS09020 (1903948) | 1903948..1905660 | + | 1713 | WP_001119822.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|