MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 118619 bp
Accession: NZ_CP104869 Location: 4698735..4817353 Organism: Pseudomonas aeruginosa strain PALA8 Replicon: chromosome
Accession: NZ_CP104869 Location: 4698735..4817353 Organism: Pseudomonas aeruginosa strain PALA8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA8_RS21635 (PALA8_04312) | 4693837..4694397 | + | 561 | WP_003108605.1 | hypothetical protein | - |
| PALA8_RS21640 (PALA8_04313) | 4694518..4694922 | - | 405 | WP_003108604.1 | thioesterase family protein | - |
| PALA8_RS21645 | 4695317..4695730 | - | 414 | WP_003134054.1 | CesT family type III secretion system chaperone SpcU | - |
| PALA8_RS21650 (PALA8_04314) | 4695727..4697790 | - | 2064 | WP_003134060.1 | type III secretion system effector cytotoxin ExoU | - |
| PALA8_RS21655 (PALA8_04315) | 4697927..4698434 | - | 508 | Protein_4289 | integrase core domain-containing protein | - |
| PALA8_RS21660 (PALA8_04316) | 4698874..4699734 | + | 861 | WP_023094840.1 | ParA family protein | - |
| PALA8_RS21665 (PALA8_04317) | 4699736..4700473 | + | 738 | WP_003134063.1 | hypothetical protein | - |
| PALA8_RS21670 (PALA8_04318) | 4700470..4700967 | + | 498 | WP_003134065.1 | hypothetical protein | - |
| PALA8_RS21675 (PALA8_04319) | 4700964..4701794 | + | 831 | WP_003134067.1 | hypothetical protein | - |
| PALA8_RS21680 (PALA8_04320) | 4701791..4702477 | + | 687 | WP_003134069.1 | hypothetical protein | - |
| PALA8_RS21685 (PALA8_04321) | 4702477..4703178 | + | 702 | WP_003134071.1 | DUF2786 domain-containing protein | - |
| PALA8_RS21690 | 4703175..4703883 | + | 709 | Protein_4296 | HNH endonuclease signature motif containing protein | - |
| PALA8_RS21695 (PALA8_04323) | 4703867..4704091 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| PALA8_RS21700 (PALA8_04324) | 4704088..4705434 | + | 1347 | WP_003134077.1 | replicative DNA helicase | - |
| PALA8_RS21705 (PALA8_04325) | 4705431..4705616 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| PALA8_RS21710 (PALA8_04326) | 4705606..4706133 | + | 528 | WP_003134079.1 | hypothetical protein | - |
| PALA8_RS21715 (PALA8_04327) | 4706130..4706387 | + | 258 | WP_003134081.1 | hypothetical protein | - |
| PALA8_RS21720 | 4706380..4706874 | + | 495 | WP_003134082.1 | hypothetical protein | - |
| PALA8_RS21725 (PALA8_04329) | 4706867..4707100 | + | 234 | WP_003134084.1 | hypothetical protein | - |
| PALA8_RS21730 (PALA8_04330) | 4707100..4708116 | + | 1017 | WP_023094841.1 | nucleoid-associated protein YejK | - |
| PALA8_RS21735 (PALA8_04331) | 4708119..4708367 | + | 249 | WP_016254076.1 | Arc family DNA-binding protein | - |
| PALA8_RS21740 (PALA8_04332) | 4708364..4710100 | + | 1737 | WP_031690666.1 | ParB family protein | - |
| PALA8_RS21745 (PALA8_04333) | 4710128..4710895 | + | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| PALA8_RS21750 (PALA8_04334) | 4710892..4712217 | + | 1326 | WP_003134103.1 | STY4528 family pathogenicity island replication protein | - |
| PALA8_RS21755 | 4712329..4712793 | - | 465 | WP_154070642.1 | hypothetical protein | - |
| PALA8_RS21760 (PALA8_04336) | 4713050..4713778 | + | 729 | WP_023094843.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA8_RS21765 | 4713784..4714319 | + | 536 | Protein_4311 | DUF3158 family protein | - |
| PALA8_RS21770 (PALA8_04338) | 4714333..4714821 | + | 489 | WP_003134107.1 | single-stranded DNA-binding protein | - |
| PALA8_RS21775 | 4714926..4715120 | + | 195 | WP_031632157.1 | hypothetical protein | - |
| PALA8_RS21780 | 4715372..4715539 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| PALA8_RS21785 (PALA8_04340) | 4715840..4716034 | - | 195 | WP_023094845.1 | hypothetical protein | - |
| PALA8_RS21790 (PALA8_04341) | 4716050..4716460 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PALA8_RS21795 | 4716460..4716690 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PALA8_RS21800 (PALA8_04342) | 4717008..4718927 | + | 1920 | WP_003134111.1 | type I DNA topoisomerase | - |
| PALA8_RS21805 (PALA8_04344) | 4719109..4719687 | + | 579 | WP_023094847.1 | hypothetical protein | - |
| PALA8_RS21810 (PALA8_04345) | 4719804..4720409 | - | 606 | WP_023094848.1 | LysE family translocator | - |
| PALA8_RS21815 (PALA8_04346) | 4720531..4721400 | + | 870 | WP_023094849.1 | HTH-type transcriptional regulator HdfR | VF |
| PALA8_RS21820 (PALA8_04347) | 4722053..4723735 | + | 1683 | WP_269973429.1 | hypothetical protein | - |
| PALA8_RS21825 (PALA8_04348) | 4723732..4725705 | + | 1974 | WP_269973430.1 | DEAD/DEAH box helicase | - |
| PALA8_RS21830 (PALA8_04349) | 4725793..4726905 | + | 1113 | WP_023094851.1 | hypothetical protein | VF |
| PALA8_RS21835 (PALA8_04350) | 4726905..4728614 | + | 1710 | WP_003134120.1 | hypothetical protein | VF |
| PALA8_RS21840 (PALA8_04351) | 4728618..4729943 | + | 1326 | WP_003134121.1 | type 4b pilus protein PilO2 | - |
| PALA8_RS21845 (PALA8_04352) | 4729933..4730466 | + | 534 | WP_003134123.1 | type IV pilus biogenesis protein PilP | - |
| PALA8_RS21850 (PALA8_04353) | 4730475..4732055 | + | 1581 | WP_003134124.1 | hypothetical protein | VF |
| PALA8_RS21855 (PALA8_04354) | 4732055..4733134 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA8_RS21860 (PALA8_04355) | 4733156..4733686 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| PALA8_RS21865 (PALA8_04356) | 4733683..4734624 | + | 942 | WP_003134125.1 | ATPase, T2SS/T4P/T4SS family | - |
| PALA8_RS21870 (PALA8_04357) | 4734629..4735957 | + | 1329 | WP_003134127.1 | hypothetical protein | VF |
| PALA8_RS21875 (PALA8_04358) | 4735986..4736423 | + | 438 | WP_003134129.1 | hypothetical protein | VF |
| PALA8_RS21880 (PALA8_04359) | 4737230..4738069 | - | 840 | WP_023094852.1 | hypothetical protein | - |
| PALA8_RS21885 (PALA8_04360) | 4738196..4739374 | + | 1179 | WP_023094853.1 | hypothetical protein | - |
| PALA8_RS21890 (PALA8_04361) | 4739371..4741635 | + | 2265 | WP_003134145.1 | Mov34/MPN/PAD-1 family protein | - |
| PALA8_RS21895 (PALA8_04362) | 4741721..4742806 | + | 1086 | WP_023094854.1 | MBL fold metallo-hydrolase | - |
| PALA8_RS21900 (PALA8_04363) | 4742803..4743630 | + | 828 | WP_023094855.1 | hypothetical protein | - |
| PALA8_RS21905 (PALA8_04364) | 4744024..4744413 | + | 390 | WP_016264238.1 | hypothetical protein | - |
| PALA8_RS21910 (PALA8_04365) | 4744667..4744801 | + | 135 | WP_003109366.1 | hypothetical protein | - |
| PALA8_RS21915 (PALA8_04366) | 4745125..4745613 | + | 489 | WP_023094856.1 | STY4534 family ICE replication protein | - |
| PALA8_RS21920 (PALA8_04367) | 4745751..4745909 | + | 159 | WP_003134147.1 | hypothetical protein | - |
| PALA8_RS21925 (PALA8_04368) | 4745983..4746180 | + | 198 | WP_023094857.1 | hypothetical protein | - |
| PALA8_RS21930 (PALA8_04370) | 4746665..4747372 | + | 708 | WP_003134149.1 | hypothetical protein | - |
| PALA8_RS21935 (PALA8_04371) | 4747608..4747958 | + | 351 | WP_003134150.1 | hypothetical protein | - |
| PALA8_RS21940 (PALA8_04372) | 4748015..4748647 | + | 633 | WP_003134151.1 | DUF3275 family protein | - |
| PALA8_RS21945 (PALA8_04373) | 4748644..4748919 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| PALA8_RS21950 (PALA8_04374) | 4748989..4749351 | + | 363 | WP_003134152.1 | hypothetical protein | - |
| PALA8_RS21955 (PALA8_04375) | 4749419..4749673 | + | 255 | WP_269973431.1 | hypothetical protein | - |
| PALA8_RS21960 (PALA8_04376) | 4749765..4750370 | + | 606 | WP_003134154.1 | hypothetical protein | - |
| PALA8_RS21965 (PALA8_04377) | 4750400..4751845 | + | 1446 | WP_269973432.1 | DUF6094 domain-containing protein | - |
| PALA8_RS21970 (PALA8_04378) | 4751950..4754199 | + | 2250 | WP_003134156.1 | DEAD/DEAH box helicase | - |
| PALA8_RS21975 | 4754308..4754529 | - | 222 | WP_049874674.1 | hypothetical protein | - |
| PALA8_RS21980 (PALA8_04379) | 4755018..4756253 | - | 1236 | WP_031690673.1 | helix-turn-helix domain-containing protein | - |
| PALA8_RS21985 (PALA8_04380) | 4756509..4756778 | + | 270 | WP_023094860.1 | YtcA family lipoprotein | - |
| PALA8_RS21990 (PALA8_04381) | 4756791..4757870 | + | 1080 | WP_023094861.1 | Multidrug resistance protein MdtN | VF |
| PALA8_RS21995 (PALA8_04382) | 4757854..4759890 | + | 2037 | WP_003086207.1 | FUSC family protein | - |
| PALA8_RS22000 | 4760109..4760256 | + | 148 | Protein_4358 | IS3 family transposase | - |
| PALA8_RS22005 (PALA8_04383) | 4760306..4760905 | + | 600 | WP_003086204.1 | HTH-type transcriptional regulator DmlR | VF |
| PALA8_RS22010 | 4761041..4761127 | + | 87 | Protein_4360 | hypothetical protein | - |
| PALA8_RS22015 (PALA8_04384) | 4761141..4761593 | + | 453 | WP_014603646.1 | halogenase | - |
| PALA8_RS22020 (PALA8_04385) | 4761922..4762812 | - | 891 | WP_269973433.1 | LysR family transcriptional regulator | - |
| PALA8_RS22025 (PALA8_04386) | 4763210..4764730 | - | 1521 | WP_031690674.1 | MFS transporter | - |
| PALA8_RS22030 (PALA8_04387) | 4764746..4765954 | - | 1209 | WP_023094862.1 | Multidrug export protein EmrA | VF |
| PALA8_RS22035 (PALA8_04388) | 4765944..4767377 | - | 1434 | WP_225525655.1 | efflux transporter outer membrane subunit | - |
| PALA8_RS22040 | 4767592..4768176 | - | 585 | WP_031632454.1 | isochorismatase family protein | - |
| PALA8_RS22045 (PALA8_04389) | 4768278..4769012 | - | 735 | WP_071535248.1 | pirin family protein | - |
| PALA8_RS22050 (PALA8_04390) | 4769386..4769997 | - | 612 | WP_023094864.1 | glutathione S-transferase family protein | - |
| PALA8_RS22055 (PALA8_04391) | 4770028..4770885 | + | 858 | WP_003086189.1 | alpha/beta hydrolase | - |
| PALA8_RS22060 (PALA8_04392) | 4771268..4772716 | - | 1449 | WP_003134163.1 | Catalase | VF |
| PALA8_RS22065 (PALA8_04394) | 4773117..4774169 | + | 1053 | Protein_4371 | IS5 family transposase ISPa16 | Transposase |
| PALA8_RS22070 (PALA8_04395) | 4774298..4774978 | + | 681 | WP_003134165.1 | hypothetical protein | - |
| PALA8_RS22075 (PALA8_04396) | 4774989..4775744 | + | 756 | WP_269973434.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA8_RS22080 (PALA8_04397) | 4775729..4776310 | + | 582 | WP_003134167.1 | hypothetical protein | VF |
| PALA8_RS22085 (PALA8_04398) | 4776307..4776807 | + | 501 | WP_003134168.1 | integrating conjugative element protein | - |
| PALA8_RS22090 (PALA8_04399) | 4776816..4777085 | + | 270 | WP_003134169.1 | hypothetical protein | - |
| PALA8_RS22095 (PALA8_04400) | 4777090..4779321 | + | 2232 | WP_003134171.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA8_RS22100 (PALA8_04401) | 4779321..4780067 | + | 747 | WP_003134173.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA8_RS22105 (PALA8_04402) | 4780078..4781559 | + | 1482 | WP_003134175.1 | UvrD-helicase domain-containing protein | - |
| PALA8_RS22110 (PALA8_04403) | 4781690..4782799 | + | 1110 | WP_003134177.1 | hypothetical protein | - |
| PALA8_RS22115 | 4782843..4782903 | - | 61 | Protein_4381 | hypothetical protein | - |
| PALA8_RS22120 (PALA8_04404) | 4783328..4783627 | + | 300 | WP_003086170.1 | hypothetical protein | - |
| PALA8_RS22125 (PALA8_04405) | 4783721..4784059 | + | 339 | WP_269973435.1 | RAQPRD family integrative conjugative element protein | - |
| PALA8_RS22130 | 4784056..4784295 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA8_RS22135 (PALA8_04407) | 4784313..4784669 | + | 357 | WP_023094868.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA8_RS22140 (PALA8_04408) | 4784680..4785066 | + | 387 | WP_003134190.1 | TIGR03750 family conjugal transfer protein | - |
| PALA8_RS22145 (PALA8_04409) | 4785063..4785722 | + | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA8_RS22150 (PALA8_04410) | 4785719..4786603 | + | 885 | WP_003134192.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA8_RS22155 (PALA8_04411) | 4786587..4788092 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA8_RS22160 (PALA8_04412) | 4788070..4788513 | + | 444 | WP_003134194.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA8_RS22165 (PALA8_04413) | 4788513..4791455 | + | 2943 | WP_023094870.1 | conjugative transfer ATPase | - |
| PALA8_RS22170 (PALA8_04414) | 4791452..4791736 | + | 285 | WP_003134196.1 | hypothetical protein | - |
| PALA8_RS22175 (PALA8_04415) | 4791733..4792392 | + | 660 | WP_023094871.1 | DsbA family protein | - |
| PALA8_RS22180 (PALA8_04416) | 4792389..4792607 | - | 219 | WP_004347910.1 | hypothetical protein | - |
| PALA8_RS22185 | 4793007..4793565 | + | 559 | Protein_4395 | recombinase family protein | - |
| PALA8_RS22190 (PALA8_04419) | 4793620..4794294 | - | 675 | WP_044286351.1 | hypothetical protein | - |
| PALA8_RS22195 (PALA8_04420) | 4794377..4795042 | - | 666 | WP_052155769.1 | DUF3218 family protein | - |
| PALA8_RS22200 (PALA8_04421) | 4795056..4796054 | - | 999 | WP_023094874.1 | pesticin C-terminus-like muramidase | - |
| PALA8_RS22205 (PALA8_04422) | 4796318..4799284 | + | 2967 | WP_003134201.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PALA8_RS22210 | 4801193..4801624 | + | 432 | WP_003134206.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA8_RS22215 (PALA8_04424) | 4801624..4802562 | + | 939 | WP_003086152.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA8_RS22220 (PALA8_04425) | 4802580..4803962 | + | 1383 | WP_003134207.1 | integrating conjugative element protein | - |
| PALA8_RS22225 (PALA8_04426) | 4803962..4804309 | + | 348 | WP_003134208.1 | hypothetical protein | - |
| PALA8_RS22230 (PALA8_04427) | 4804306..4805850 | + | 1545 | WP_269973436.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA8_RS22235 (PALA8_04428) | 4805885..4806235 | - | 351 | WP_023094875.1 | DUF3742 family protein | - |
| PALA8_RS22240 (PALA8_04429) | 4806354..4806626 | + | 273 | WP_003125101.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA8_RS22245 (PALA8_04430) | 4806630..4806980 | + | 351 | WP_003134211.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA8_RS22250 | 4807469..4808413 | - | 945 | WP_225319073.1 | toll/interleukin-1 receptor domain-containing protein | - |
| PALA8_RS22255 | 4808576..4809016 | + | 441 | WP_063837802.1 | hypothetical protein | - |
| PALA8_RS22260 (PALA8_04432) | 4809055..4809732 | + | 678 | WP_003126718.1 | DNA adenine methylase | - |
| PALA8_RS22265 (PALA8_04433) | 4809732..4810565 | + | 834 | WP_023094878.1 | hypothetical protein | - |
| PALA8_RS22270 | 4810500..4811180 | - | 681 | WP_069954859.1 | nitroreductase family protein | - |
| PALA8_RS22275 (PALA8_04434) | 4811158..4811763 | - | 606 | WP_023094879.1 | 7-cyano-7-deazaguanine synthase | - |
| PALA8_RS22280 (PALA8_04435) | 4811760..4812971 | - | 1212 | WP_003134214.1 | PfkB family carbohydrate kinase | - |
| PALA8_RS22285 | 4812992..4813309 | - | 318 | WP_031690684.1 | hypothetical protein | - |
| PALA8_RS22290 | 4813739..4815659 | + | 1921 | Protein_4416 | helicase/relaxase domain-containing protein | - |
| PALA8_RS22295 (PALA8_04439) | 4815656..4816939 | + | 1284 | WP_003134216.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA8_RS22305 (PALA8_04441) | 4817444..4818118 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PALA8_RS22310 (PALA8_04442) | 4818134..4818781 | - | 648 | WP_003111416.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| PALA8_RS22315 (PALA8_04443) | 4819001..4819825 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| PALA8_RS22320 (PALA8_04444) | 4819835..4820341 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| PALA8_RS22325 (PALA8_04445) | 4820394..4821692 | - | 1299 | WP_003086128.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|