MGE detailed information
MGE type: Prophage MGE length: 45498 bp
Accession: NZ_CP104677 Location: 1993842..2039339 Organism: Salmonella enterica strain PNUSAS036471 Replicon: chromosome
Accession: NZ_CP104677 Location: 1993842..2039339 Organism: Salmonella enterica strain PNUSAS036471 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4534_RS09645 () | 1990114..1990755 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N4534_RS09650 () | 1990855..1992033 | - | 1179 | WP_000173429.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N4534_RS09655 () | 1992164..1992454 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N4534_RS09660 () | 1992522..1992875 | + | 354 | WP_001042123.1 | protein YebF | - |
| N4534_RS09665 () | 1992969..1993628 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| N4534_RS09670 () | 1993842..1995893 | + | 2052 | WP_000936997.1 | oligopeptidase B | - |
| N4534_RS09675 () | 1995930..1996628 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| N4534_RS09680 () | 1996652..1997308 | - | 657 | WP_000100249.1 | carbon-nitrogen hydrolase family protein | - |
| N4534_RS09685 () | 1997416..1997646 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N4534_RS09690 () | 1997784..1998158 | + | 375 | WP_000168395.1 | CopC domain-containing protein YobA | - |
| N4534_RS09695 () | 1998159..1999034 | + | 876 | WP_000979686.1 | copper homeostasis membrane protein CopD | - |
| N4534_RS09700 () | 1999051..1999404 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 1999504..1999649 | - | 146 | - | - | Antitoxin Detail |
| - | 1999544..1999647 | + | 104 | - | - | Toxin Detail |
| N4534_RS09705 () | 1999777..2000856 | - | 1080 | WP_000087646.1 | hypothetical protein ; Integrase | Integrase |
| N4534_RS09710 () | 2000886..2001881 | - | 996 | Protein_1895 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| N4534_RS09715 () | 2002029..2002277 | + | 249 | Protein_1896 | glycoside hydrolase family 19 protein | - |
| N4534_RS09720 () | 2002274..2002808 | + | 535 | Protein_1897 | DUF2514 domain-containing protein | - |
| N4534_RS09725 () | 2003065..2003232 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| N4534_RS09730 () | 2003297..2003485 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| N4534_RS09735 () | 2003540..2003800 | + | 261 | Protein_1900 | DUF1441 family protein | - |
| N4534_RS09740 () | 2004015..2004359 | + | 345 | Protein_1901 | macro domain-containing protein | - |
| N4534_RS09745 () | 2004369..2004839 | + | 471 | Protein_1902 | tail fiber assembly protein | - |
| N4534_RS09750 () | 2004936..2005136 | - | 201 | WP_031604217.1 | PagK family vesicle-borne virulence factor | - |
| N4534_RS09755 () | 2005525..2005705 | - | 181 | Protein_1904 | IS3 family transposase | - |
| N4534_RS09760 () | 2005696..2005797 | + | 102 | Protein_1905 | arsenic transporter | - |
| N4534_RS09765 () | 2006419..2006651 | + | 233 | Protein_1906 | helix-turn-helix domain-containing protein | - |
| N4534_RS09770 () | 2006978..2007592 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| N4534_RS09775 () | 2007602..2007760 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N4534_RS09780 () | 2007893..2008807 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| N4534_RS09785 () | 2010102..2010524 | - | 423 | Protein_1910 | hypothetical protein ; Integrase | Integrase |
| N4534_RS09790 () | 2010594..2011788 | + | 1195 | Protein_1911 | IS256 family transposase IS285 | Transposase |
| N4534_RS09795 () | 2011934..2012074 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| N4534_RS09800 () | 2012239..2012508 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| N4534_RS09805 () | 2012881..2013300 | + | 420 | WP_001025517.1 | GNAT family N-acetyltransferase | - |
| N4534_RS09810 () | 2013535..2014626 | - | 1092 | Protein_1915 | lipopolysaccharide N-acetylglucosaminyltransferase | - |
| N4534_RS09815 () | 2015516..2016254 | - | 739 | Protein_1916 | hypothetical protein ; Integrase | Integrase |
| N4534_RS09820 () | 2016373..2017470 | - | 1098 | WP_020924196.1 | acyltransferase family protein | - |
| N4534_RS09825 () | 2018083..2018286 | - | 204 | WP_000774038.1 | Outer membrane usher protein PapC | VF |
| N4534_RS09830 () | 2018470..2018715 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| N4534_RS09835 () | 2019842..2020015 | + | 174 | WP_021000421.1 | CZB domain-containing protein | - |
| N4534_RS09840 () | 2020271..2020747 | - | 477 | WP_000030940.1 | hypothetical protein | - |
| N4534_RS09845 () | 2021075..2021470 | - | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| N4534_RS09850 () | 2022154..2022876 | + | 723 | WP_000182074.1 | Guanine nucleotide exchange factor sopE2 | VF |
| N4534_RS09855 () | 2023161..2023325 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| N4534_RS09860 () | 2023548..2024198 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| N4534_RS09865 () | 2024217..2024408 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| N4534_RS09870 () | 2024519..2024755 | - | 237 | WP_024131167.1 | YebV family protein | - |
| N4534_RS09875 () | 2024873..2026312 | - | 1440 | WP_001749614.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N4534_RS09880 () | 2026390..2029023 | - | 2634 | WP_001521100.1 | hypothetical protein | VF |
| N4534_RS09885 () | 2028992..2030275 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| N4534_RS09890 () | 2030404..2030901 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| N4534_RS09895 () | 2030999..2031685 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| N4534_RS09900 () | 2031705..2033753 | + | 2049 | WP_001091239.1 | carboxy terminal-processing peptidase | - |
| N4534_RS09905 () | 2033946..2034827 | + | 882 | WP_000984498.1 | protease HtpX | - |
| N4534_RS09910 () | 2034875..2036248 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| N4534_RS09915 () | 2036424..2037215 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| N4534_RS09920 () | 2037427..2037666 | - | 240 | WP_001236780.1 | invasion protein YobH | - |
| N4534_RS09925 () | 2037824..2037967 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| N4534_RS09930 () | 2038038..2038325 | + | 288 | WP_001000660.1 | YebO family protein | - |
| N4534_RS09935 () | 2038974..2039117 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| N4534_RS09940 () | 2039130..2039339 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N4534_RS09945 () | 2039559..2041304 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| N4534_RS09950 () | 2041370..2042179 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N4534_RS09955 () | 2042176..2042742 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| N4534_RS09960 () | 2043152..2043610 | - | 459 | WP_000156279.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|