MGE detailed information
MGE type: Prophage MGE length: 63582 bp
Accession: NZ_CP104500 Location: 2745439..2809020 Organism: Escherichia coli strain E9 Replicon: chromosome
Accession: NZ_CP104500 Location: 2745439..2809020 Organism: Escherichia coli strain E9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O75_RS13400 () | 2741295..2742095 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| N5O75_RS13405 () | 2742108..2742959 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| N5O75_RS13410 () | 2743014..2743472 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| N5O75_RS13415 () | 2743901..2744467 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| N5O75_RS13420 () | 2744464..2745273 | - | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N5O75_RS13425 () | 2745439..2745648 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N5O75_RS13430 () | 2745661..2745804 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| N5O75_RS13435 () | 2746473..2746760 | - | 288 | WP_001006866.1 | YebO family protein | - |
| N5O75_RS13440 () | 2746835..2746978 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| N5O75_RS13445 () | 2747137..2747376 | + | 240 | WP_001211011.1 | YobH family protein | - |
| N5O75_RS13450 () | 2747519..2748310 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| N5O75_RS13455 () | 2748487..2749860 | + | 1374 | WP_261306780.1 | MFS transporter | - |
| N5O75_RS13460 () | 2749906..2750787 | - | 882 | WP_000984517.1 | protease HtpX | - |
| N5O75_RS13465 () | 2750979..2753027 | - | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| N5O75_RS13470 () | 2753047..2753745 | - | 699 | WP_038977157.1 | RNA chaperone ProQ | - |
| N5O75_RS13475 () | 2753842..2754339 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| N5O75_RS13480 () | 2754469..2755752 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| N5O75_RS13485 () | 2755721..2758354 | + | 2634 | WP_001297532.1 | Intermembrane transport protein YebT | VF |
| N5O75_RS13490 () | 2758434..2759873 | + | 1440 | WP_024190454.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N5O75_RS13495 () | 2759991..2760227 | + | 237 | WP_001295499.1 | YebV family protein | - |
| N5O75_RS13500 () | 2760332..2760523 | + | 192 | WP_001296140.1 | YebW family protein | - |
| N5O75_RS13505 () | 2760524..2761180 | - | 657 | WP_000812734.1 | protein-serine/threonine phosphatase | - |
| N5O75_RS13510 () | 2761645..2762199 | - | 555 | WP_103744055.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| N5O75_RS13515 () | 2762226..2762774 | + | 549 | WP_261306781.1 | phage tail protein | - |
| N5O75_RS13520 () | 2762774..2763376 | + | 603 | WP_089597620.1 | tail fiber assembly protein | - |
| N5O75_RS13525 () | 2763348..2763788 | - | 441 | WP_261306782.1 | tail fiber assembly protein | - |
| N5O75_RS13530 () | 2763791..2764486 | - | 696 | WP_227479432.1 | hypothetical protein | - |
| N5O75_RS13535 () | 2764486..2765166 | - | 681 | WP_261306783.1 | DUF2612 domain-containing protein | - |
| N5O75_RS13540 () | 2765163..2766362 | - | 1200 | WP_097340187.1 | baseplate J/gp47 family protein | - |
| N5O75_RS13545 () | 2766362..2766715 | - | 354 | WP_001270634.1 | hypothetical protein | - |
| N5O75_RS13550 () | 2766715..2767467 | - | 753 | WP_261306784.1 | Gp138 family membrane-puncturing spike protein | - |
| N5O75_RS13555 () | 2767527..2767766 | - | 240 | WP_000466689.1 | DUF4282 domain-containing protein | - |
| N5O75_RS13560 () | 2767906..2768241 | - | 336 | WP_000755137.1 | hypothetical protein | - |
| N5O75_RS13565 () | 2768238..2769272 | - | 1035 | WP_000042293.1 | hypothetical protein | - |
| N5O75_RS13570 () | 2769275..2769577 | - | 303 | WP_000648663.1 | hypothetical protein | - |
| N5O75_RS13575 () | 2769581..2770231 | - | 651 | WP_089553543.1 | hypothetical protein | - |
| N5O75_RS13580 () | 2770231..2772237 | - | 2007 | WP_000990887.1 | hypothetical protein | - |
| N5O75_RS13585 () | 2772227..2772403 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| N5O75_RS13590 () | 2772415..2772867 | - | 453 | WP_000393964.1 | hypothetical protein | - |
| N5O75_RS13595 () | 2772871..2773311 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| N5O75_RS13600 () | 2773322..2774467 | - | 1146 | WP_208489206.1 | DUF3383 family protein | - |
| N5O75_RS13605 () | 2774471..2775034 | - | 564 | WP_000503647.1 | hypothetical protein | - |
| N5O75_RS13610 () | 2775009..2775398 | - | 390 | WP_001142480.1 | hypothetical protein | - |
| N5O75_RS13615 () | 2775385..2775939 | - | 555 | WP_000008731.1 | hypothetical protein | - |
| N5O75_RS13620 () | 2775936..2776343 | - | 408 | WP_000042171.1 | DUF4054 domain-containing protein | - |
| N5O75_RS13625 () | 2776309..2776677 | - | 369 | WP_001040696.1 | hypothetical protein | - |
| N5O75_RS13630 () | 2776718..2777659 | - | 942 | WP_000627487.1 | DUF2184 domain-containing protein | - |
| N5O75_RS13635 () | 2777671..2778177 | - | 507 | WP_001066729.1 | hypothetical protein | - |
| N5O75_RS13640 () | 2778181..2779401 | - | 1221 | WP_000873186.1 | DUF2213 domain-containing protein | - |
| N5O75_RS13645 () | 2779416..2780150 | - | 735 | WP_000184967.1 | phage minor head protein | - |
| N5O75_RS13650 () | 2780041..2781507 | - | 1467 | WP_000113487.1 | DUF1073 domain-containing protein | - |
| N5O75_RS13655 () | 2781507..2782910 | - | 1404 | WP_000200750.1 | PBSX family phage terminase large subunit | - |
| N5O75_RS13660 () | 2782876..2783625 | - | 750 | WP_001118114.1 | hypothetical protein | - |
| N5O75_RS13665 () | 2783683..2783868 | - | 186 | WP_000113284.1 | hypothetical protein | - |
| N5O75_RS13670 () | 2783849..2784127 | - | 279 | WP_186278338.1 | hypothetical protein | - |
| N5O75_RS13675 () | 2784012..2784404 | - | 393 | WP_062898035.1 | DUF2570 domain-containing protein | - |
| N5O75_RS13680 () | 2784388..2784864 | - | 477 | WP_001194120.1 | glycoside hydrolase family protein | - |
| N5O75_RS13685 () | 2784868..2785209 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| N5O75_RS13690 () | 2785373..2785588 | + | 216 | WP_071779784.1 | hypothetical protein | - |
| N5O75_RS13695 () | 2785557..2786126 | - | 570 | WP_134235133.1 | hypothetical protein | - |
| N5O75_RS13700 () | 2786360..2786917 | - | 558 | WP_261306785.1 | ORF6N domain-containing protein | - |
| N5O75_RS13705 () | 2787191..2787745 | - | 555 | WP_000640150.1 | DUF1133 family protein | - |
| N5O75_RS13710 () | 2787742..2788032 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| N5O75_RS13715 () | 2788032..2788631 | - | 600 | WP_096988384.1 | DUF1367 family protein | - |
| N5O75_RS13720 () | 2789191..2789346 | - | 156 | WP_000813255.1 | type I toxin-antitoxin system toxin HokD | - |
| N5O75_RS13725 () | 2789954..2790181 | - | 228 | Protein_2690 | dTDP-6-deoxy-L-hexose 3-O-methyltransferase | - |
| N5O75_RS13730 () | 2790428..2790553 | - | 126 | Protein_2691 | hypothetical protein | - |
| N5O75_RS13735 () | 2790555..2790767 | - | 213 | Protein_2692 | hypothetical protein | - |
| N5O75_RS13740 () | 2790871..2791626 | - | 756 | WP_261306786.1 | DUF1627 domain-containing protein | - |
| N5O75_RS13745 () | 2791649..2792395 | - | 747 | WP_047662687.1 | ATP-binding protein | - |
| N5O75_RS13750 () | 2792402..2792710 | - | 309 | Protein_2695 | DUF1376 domain-containing protein | - |
| N5O75_RS13755 () | 2793092..2793532 | - | 441 | Protein_2696 | hypothetical protein | - |
| N5O75_RS13760 () | 2793610..2794032 | - | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| N5O75_RS13765 () | 2794029..2794274 | - | 246 | WP_001033915.1 | helix-turn-helix domain-containing protein | - |
| N5O75_RS13770 () | 2794372..2794761 | + | 390 | WP_033544642.1 | helix-turn-helix domain-containing protein | - |
| N5O75_RS13775 () | 2795072..2795227 | + | 156 | WP_097291182.1 | DUF1391 family protein | - |
| N5O75_RS13780 () | 2795229..2795354 | + | 126 | Protein_2701 | hypothetical protein | - |
| N5O75_RS13785 () | 2796217..2796438 | + | 222 | WP_000560228.1 | killing protein KilR | - |
| N5O75_RS13790 () | 2796438..2796608 | + | 171 | WP_086590414.1 | YdaE family protein | - |
| N5O75_RS13795 () | 2796683..2796957 | + | 275 | Protein_2704 | hypothetical protein | - |
| N5O75_RS13800 () | 2797056..2800220 | + | 3165 | WP_261306787.1 | exodeoxyribonuclease VIII | - |
| N5O75_RS13805 () | 2800232..2801284 | + | 1053 | WP_001004419.1 | RecT family recombinase | - |
| N5O75_RS13810 () | 2801348..2801542 | + | 195 | WP_071780718.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| N5O75_RS13815 () | 2801535..2801723 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2801541..2801719 | - | 179 | NuclAT_0 | - | - |
| - () | 2801541..2801719 | - | 179 | NuclAT_0 | - | - |
| - () | 2801541..2801719 | - | 179 | NuclAT_0 | - | - |
| - () | 2801541..2801719 | - | 179 | NuclAT_0 | - | - |
| N5O75_RS13820 () | 2801830..2802111 | + | 282 | WP_001311878.1 | excisionase | - |
| N5O75_RS13825 () | 2802077..2803153 | + | 1077 | WP_001189087.1 | hypothetical protein ; Integrase | Integrase |
| - | 2803284..2803518 | + | 235 | - | - | Antitoxin Detail |
| - | 2803285..2803388 | - | 104 | - | - | Toxin Detail |
| N5O75_RS13830 () | 2803546..2803887 | - | 342 | WP_000976492.1 | YebY family protein | - |
| N5O75_RS13835 () | 2803900..2804772 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| N5O75_RS13840 () | 2804776..2805150 | - | 375 | WP_000204700.1 | CopC domain-containing protein YobA | - |
| N5O75_RS13845 () | 2805289..2805519 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| N5O75_RS13850 () | 2805621..2806277 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| N5O75_RS13855 () | 2806301..2806963 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| N5O75_RS13860 () | 2806960..2809020 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| N5O75_RS13865 () | 2809229..2809888 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| N5O75_RS13870 () | 2810222..2810578 | - | 357 | WP_001295500.1 | protein YebF | - |
| N5O75_RS13875 () | 2810645..2810935 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| N5O75_RS13880 () | 2811069..2812247 | + | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N5O75_RS13885 () | 2812303..2812944 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|