MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 68365 bp
Accession: NZ_CP104126 Location: 369359..437723 Organism: Sinorhizobium sp. M103 Replicon: chromosome
Accession: NZ_CP104126 Location: 369359..437723 Organism: Sinorhizobium sp. M103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0Q90_RS01780 (N0Q90_01780) | 364945..365355 | - | 411 | WP_275596321.1 | hypothetical protein | - |
| N0Q90_RS01785 (N0Q90_01785) | 365540..365986 | + | 447 | WP_275602454.1 | hypothetical protein | - |
| N0Q90_RS01790 (N0Q90_01790) | 365999..367273 | + | 1275 | WP_275596319.1 | hypothetical protein | - |
| N0Q90_RS01795 (N0Q90_01795) | 367275..368756 | + | 1482 | WP_275596318.1 | peroxidase | - |
| N0Q90_RS01800 (N0Q90_01800) | 368887..369832 | + | 946 | WP_275596117.1 | IS630 family transposase ISRm2011-2 | Transposase |
| N0Q90_RS01805 (N0Q90_01805) | 369921..370661 | - | 741 | WP_275602455.1 | hypothetical protein | - |
| N0Q90_RS01810 (N0Q90_01810) | 370655..371098 | - | 444 | WP_275599818.1 | hypothetical protein | - |
| N0Q90_RS01815 (N0Q90_01815) | 371095..372855 | - | 1761 | WP_275599817.1 | GMC family oxidoreductase | - |
| N0Q90_RS01820 (N0Q90_01820) | 372940..375429 | - | 2490 | WP_275596315.1 | hypothetical protein | - |
| N0Q90_RS01825 (N0Q90_01825) | 376394..379345 | - | 2952 | WP_275602456.1 | hypothetical protein | - |
| N0Q90_RS01830 (N0Q90_01830) | 381264..382181 | + | 918 | WP_275596313.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| N0Q90_RS01835 (N0Q90_01835) | 382405..382839 | + | 435 | WP_275596312.1 | hypothetical protein | - |
| N0Q90_RS01840 (N0Q90_01840) | 384154..384453 | - | 300 | WP_275596311.1 | hypothetical protein | - |
| N0Q90_RS01845 (N0Q90_01845) | 384453..385421 | - | 969 | Protein_368 | transposase | - |
| N0Q90_RS01850 (N0Q90_01850) | 385623..386879 | - | 1257 | WP_275596310.1 | plasmid replication protein RepC | - |
| N0Q90_RS01855 (N0Q90_01855) | 387114..388151 | - | 1038 | WP_275596309.1 | plasmid partitioning protein RepB | - |
| N0Q90_RS01860 (N0Q90_01860) | 388148..389363 | - | 1216 | Protein_371 | plasmid partitioning protein RepA | - |
| N0Q90_RS01865 (N0Q90_01865) | 389736..390356 | + | 621 | WP_275596307.1 | Acyl-homoserine-lactone synthase | VF |
| N0Q90_RS01870 (N0Q90_01870) | 390368..391345 | + | 978 | WP_275596306.1 | Type IV secretion system protein VirB11 | VF |
| N0Q90_RS01875 (N0Q90_01875) | 391335..391721 | + | 387 | WP_275602457.1 | TrbC/VirB2 family protein | - |
| N0Q90_RS01880 (N0Q90_01880) | 391714..392013 | + | 300 | WP_275596304.1 | conjugal transfer protein TrbD | - |
| N0Q90_RS01885 (N0Q90_01885) | 392024..394480 | + | 2457 | WP_275596303.1 | conjugal transfer protein TrbE | - |
| N0Q90_RS01890 (N0Q90_01890) | 394452..395255 | + | 804 | WP_275596302.1 | P-type conjugative transfer protein TrbJ | - |
| N0Q90_RS01895 (N0Q90_01895) | 395252..395443 | + | 192 | WP_275596301.1 | entry exclusion protein TrbK | - |
| N0Q90_RS01900 (N0Q90_01900) | 395437..396611 | + | 1175 | Protein_379 | P-type conjugative transfer protein TrbL | - |
| N0Q90_RS01905 (N0Q90_01905) | 396632..397294 | + | 663 | WP_275599814.1 | conjugal transfer protein TrbF | - |
| N0Q90_RS01910 (N0Q90_01910) | 397313..398119 | + | 807 | Protein_381 | P-type conjugative transfer protein TrbG | - |
| N0Q90_RS01915 (N0Q90_01915) | 398127..398564 | + | 438 | WP_275596300.1 | conjugal transfer protein TrbH | - |
| N0Q90_RS01920 (N0Q90_01920) | 398577..399878 | + | 1302 | WP_275596299.1 | IncP-type conjugal transfer protein TrbI | - |
| N0Q90_RS01925 (N0Q90_01925) | 400065..400769 | + | 705 | WP_275596298.1 | putative transcriptional activator protein TraR | VF |
| N0Q90_RS01930 (N0Q90_01930) | 400790..401095 | - | 306 | Protein_385 | transcriptional repressor TraM | - |
| N0Q90_RS01935 (N0Q90_01935) | 401301..401513 | + | 213 | WP_275596297.1 | helix-turn-helix transcriptional regulator | - |
| N0Q90_RS01940 (N0Q90_01940) | 401578..401844 | - | 267 | WP_275596296.1 | hypothetical protein | - |
| N0Q90_RS01945 (N0Q90_01945) | 402276..402477 | + | 202 | Protein_388 | hypothetical protein | - |
| N0Q90_RS01950 (N0Q90_01950) | 402658..402915 | + | 258 | Protein_389 | IS3 family transposase ISRle4 | Transposase |
| N0Q90_RS01955 (N0Q90_01955) | 403160..403440 | - | 281 | Protein_390 | transposase | - |
| N0Q90_RS01960 (N0Q90_01960) | 403441..403869 | + | 429 | WP_275596404.1 | IS21 family transposase ISRel16 | Transposase |
| N0Q90_RS01965 (N0Q90_01965) | 403909..404554 | + | 646 | Protein_392 | IS21-like element helper ATPase IstB | - |
| N0Q90_RS01970 (N0Q90_01970) | 404629..405914 | + | 1286 | Protein_393 | IS21 family transposase ISSme2 | Transposase |
| N0Q90_RS01975 (N0Q90_01975) | 405914..406714 | + | 801 | WP_275596090.1 | IS21 family transposase ISSme2 | Transposase |
| N0Q90_RS01980 (N0Q90_01980) | 406988..407325 | + | 338 | Protein_395 | transposase | - |
| N0Q90_RS01985 (N0Q90_01985) | 407579..409804 | - | 2226 | WP_275596295.1 | hypothetical protein | - |
| N0Q90_RS01990 (N0Q90_01990) | 409967..411937 | - | 1971 | WP_275596294.1 | DUF3732 domain-containing protein | - |
| N0Q90_RS01995 (N0Q90_01995) | 411934..412419 | - | 486 | WP_275596293.1 | DUF6521 family protein | - |
| N0Q90_RS02000 (N0Q90_02000) | 412507..413625 | - | 1119 | WP_275602458.1 | hypothetical protein | - |
| N0Q90_RS02005 (N0Q90_02005) | 414075..415058 | + | 984 | WP_275596291.1 | pentapeptide repeat-containing protein | - |
| N0Q90_RS02010 (N0Q90_02010) | 415036..415641 | + | 606 | WP_275596290.1 | hypothetical protein | - |
| N0Q90_RS02015 (N0Q90_02015) | 416044..416247 | + | 204 | WP_275596289.1 | hypothetical protein | - |
| N0Q90_RS02020 (N0Q90_02020) | 416470..417105 | + | 636 | WP_275596288.1 | hypothetical protein | - |
| N0Q90_RS02025 (N0Q90_02025) | 417452..417756 | - | 305 | Protein_404 | conjugal transfer protein TraH | - |
| N0Q90_RS02030 (N0Q90_02030) | 417773..418935 | - | 1163 | Protein_405 | conjugal transfer protein TraB | - |
| N0Q90_RS02035 (N0Q90_02035) | 418925..419491 | - | 567 | WP_275596287.1 | conjugative transfer signal peptidase TraF | - |
| N0Q90_RS02040 (N0Q90_02040) | 419488..422799 | - | 3312 | WP_275596286.1 | Ti-type conjugative transfer relaxase TraA | - |
| N0Q90_RS02045 (N0Q90_02045) | 423053..423349 | + | 297 | WP_085026109.1 | TraC family protein | - |
| N0Q90_RS02050 (N0Q90_02050) | 423354..423569 | + | 216 | WP_275596285.1 | type IV conjugative transfer system coupling protein TraD | - |
| N0Q90_RS02055 (N0Q90_02055) | 423562..425538 | + | 1977 | WP_275602459.1 | Protein VirD4 | VF |
| N0Q90_RS02060 (N0Q90_02060) | 425685..426728 | + | 1044 | Protein_411 | IS110 family transposase ISMex9 | Transposase |
| N0Q90_RS02065 (N0Q90_02065) | 427361..427798 | + | 438 | Protein_412 | thermonuclease family protein | - |
| N0Q90_RS02070 (N0Q90_02070) | 428004..428261 | + | 258 | WP_275596385.1 | WGR domain-containing protein | - |
| N0Q90_RS02075 (N0Q90_02075) | 428359..428493 | - | 135 | WP_275596284.1 | hypothetical protein | - |
| N0Q90_RS02080 (N0Q90_02080) | 428836..428961 | + | 126 | WP_275531997.1 | hypothetical protein | - |
| N0Q90_RS02085 (N0Q90_02085) | 429257..429568 | - | 312 | WP_085026105.1 | DUF736 domain-containing protein | - |
| N0Q90_RS02090 (N0Q90_02090) | 429956..430189 | + | 234 | WP_275599812.1 | hypothetical protein | - |
| N0Q90_RS02095 (N0Q90_02095) | 430222..430314 | - | 93 | Protein_418 | antirestriction protein ArdC | - |
| N0Q90_RS02100 (N0Q90_02100) | 430409..431020 | - | 612 | WP_275596283.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| N0Q90_RS02105 (N0Q90_02105) | 431349..431693 | - | 345 | Protein_420 | hypothetical protein | - |
| N0Q90_RS02110 (N0Q90_02110) | 432303..432557 | - | 255 | WP_244563892.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0Q90_RS02115 (N0Q90_02115) | 432584..432856 | - | 273 | WP_085026101.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| N0Q90_RS02120 (N0Q90_02120) | 433023..433327 | - | 305 | Protein_423 | hypothetical protein | - |
| N0Q90_RS02125 (N0Q90_02125) | 433847..434725 | - | 879 | WP_275596282.1 | SDR family oxidoreductase | - |
| N0Q90_RS02130 (N0Q90_02130) | 434877..435246 | + | 370 | Protein_425 | helix-turn-helix domain-containing protein | - |
| N0Q90_RS02135 (N0Q90_02135) | 435640..436665 | - | 1026 | WP_275596281.1 | zincin-like metallopeptidase domain-containing protein | - |
| N0Q90_RS02140 (N0Q90_02140) | 436920..437723 | - | 804 | WP_275596280.1 | sulfite exporter TauE/SafE family protein | - |
| N0Q90_RS02145 (N0Q90_02145) | 438330..438917 | - | 588 | WP_275596279.1 | hypothetical protein | - |
| N0Q90_RS02150 (N0Q90_02150) | 439706..439906 | - | 201 | WP_275531946.1 | DUF1419 domain-containing protein | - |
| N0Q90_RS02155 (N0Q90_02155) | 440177..441217 | - | 1041 | WP_275596278.1 | DUF3991 and toprim domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|