MGE detailed information
MGE type: Genomic_island MGE length: 34485 bp
Accession: NZ_CP104114 Location: 2309482..2343966 Organism: Escherichia coli strain USDA-ARS-USMARC-51408 Replicon: chromosome
Accession: NZ_CP104114 Location: 2309482..2343966 Organism: Escherichia coli strain USDA-ARS-USMARC-51408 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1706_RS11065 (2306297) | 2306297..2307982 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| N1706_RS11070 (2308185) | 2308185..2308307 | + | 123 | WP_120795387.1 | protein YneP | - |
| N1706_RS11075 (2308273) | 2308273..2309430 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| N1706_RS11080 (2309482) | 2309482..2311164 | - | 1683 | WP_001295684.1 | sulfatase | - |
| N1706_RS11085 (2311566) | 2311566..2312327 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| N1706_RS11090 (2312402) | 2312402..2312599 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| N1706_RS11095 (2312847) | 2312847..2315126 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| N1706_RS11100 (2315460) | 2315460..2316374 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| N1706_RS11105 (2316433) | 2316433..2316936 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| N1706_RS11110 (2316949) | 2316949..2317479 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| N1706_RS11115 (2317493) | 2317493..2318719 | - | 1227 | Protein_2151 | Outer membrane usher protein FimD | VF |
| N1706_RS11120 (2318974) | 2318974..2319182 | - | 209 | Protein_2152 | AraC family transcriptional regulator | - |
| N1706_RS11125 (2320174) | 2320174..2320599 | + | 426 | WP_007697902.1 | hypothetical protein | - |
| N1706_RS11130 (2320745) | 2320745..2321134 | + | 390 | WP_021536972.1 | hypothetical protein | - |
| N1706_RS11135 (2321554) | 2321554..2323758 | + | 2205 | WP_097451619.1 | sugar kinase | - |
| N1706_RS11140 (2323760) | 2323760..2325691 | + | 1932 | WP_040017501.1 | hypothetical protein | - |
| N1706_RS11145 (2325695) | 2325695..2326672 | + | 978 | WP_061356452.1 | hypothetical protein | - |
| N1706_RS11150 (2327262) | 2327262..2327738 | + | 477 | WP_061356415.1 | hypothetical protein | - |
| N1706_RS11155 (2327840) | 2327840..2328535 | - | 696 | WP_157919503.1 | hypothetical protein | - |
| N1706_RS11160 (2328632) | 2328632..2329794 | + | 1163 | WP_260223268.1 | IS3 family transposase IS3 | Transposase |
| N1706_RS11165 (2329888) | 2329888..2330139 | + | 252 | WP_260223269.1 | hypothetical protein | - |
| N1706_RS11170 (2330435) | 2330435..2330905 | + | 471 | WP_201794983.1 | hypothetical protein | - |
| N1706_RS11175 (2331244) | 2331244..2332074 | - | 831 | WP_260223270.1 | hypothetical protein | - |
| N1706_RS11180 (2332116) | 2332116..2334743 | - | 2628 | WP_260223271.1 | DEAD/DEAH box helicase | - |
| N1706_RS11185 (2334730) | 2334730..2335506 | - | 777 | WP_053287382.1 | DUF1837 domain-containing protein | - |
| N1706_RS11190 (2335734) | 2335734..2335985 | + | 252 | Protein_2166 | hypothetical protein | - |
| N1706_RS11195 (2336152) | 2336152..2336331 | + | 180 | WP_244581851.1 | hypothetical protein | - |
| N1706_RS11200 (2336879) | 2336879..2337175 | - | 297 | WP_061356411.1 | helix-turn-helix transcriptional regulator | - |
| N1706_RS11205 (2337488) | 2337488..2338036 | - | 549 | WP_040017488.1 | hypothetical protein | - |
| N1706_RS11210 (2338134) | 2338134..2338466 | + | 333 | WP_072040316.1 | helix-turn-helix transcriptional regulator | - |
| N1706_RS11215 (2338641) | 2338641..2339144 | - | 504 | WP_001140767.1 | hypothetical protein | - |
| N1706_RS11220 (2339137) | 2339137..2340432 | - | 1296 | WP_244581850.1 | hypothetical protein | - |
| N1706_RS11225 (2340359) | 2340359..2341663 | - | 1305 | WP_244581849.1 | hypothetical protein | - |
| N1706_RS11230 (2341667) | 2341667..2342080 | - | 414 | WP_260223272.1 | hypothetical protein | - |
| N1706_RS11235 (2342378) | 2342378..2343700 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| N1706_RS11240 (2343700) | 2343700..2343966 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|