MGE detailed information
MGE type: Mobilizable plasmid MGE length: 57095 bp
Accession: NZ_CP103973 Location: 1..57095 Organism: Escherichia coli strain DLI.5a Replicon: plasmid pDLI.5a
Accession: NZ_CP103973 Location: 1..57095 Organism: Escherichia coli strain DLI.5a Replicon: plasmid pDLI.5a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZD79_RS24270 (NZD79_24270) | 1..858 | + | 858 | WP_000130965.1 | incFII family plasmid replication initiator RepA | - |
| NZD79_RS24275 (NZD79_24275) | 1973..2961 | - | 989 | Protein_1 | IS91 family transposase ISSbo1 | Transposase |
| NZD79_RS24280 (NZD79_24280) | 3007..3486 | - | 480 | Protein_2 | IS3 family transposase IS629 | Transposase |
| NZD79_RS24285 (NZD79_24285) | 3570..5078 | - | 1509 | WP_259568223.1 | group II intron reverse transcriptase/maturase | - |
| NZD79_RS24290 (NZD79_24290) | 5751..6490 | - | 740 | Protein_4 | IS3 family transposase | - |
| NZD79_RS24295 (NZD79_24295) | 6535..7167 | + | 633 | Protein_5 | IS256 family transposase IS1414 | Transposase |
| NZD79_RS24300 (NZD79_24300) | 7209..8153 | - | 945 | WP_032266341.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| NZD79_RS24305 (NZD79_24305) | 8218..9168 | - | 951 | WP_032304890.1 | virulence factor VirK | - |
| NZD79_RS24310 (NZD79_24310) | 9173..10261 | - | 1089 | WP_001388979.1 | putative hexosyltransferase CapU | - |
| NZD79_RS24315 (NZD79_24315) | 10264..11106 | - | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| NZD79_RS24320 (NZD79_24320) | 11350..11919 | - | 570 | WP_032304866.1 | hypothetical protein | - |
| NZD79_RS24325 (NZD79_24325) | 11919..12176 | - | 258 | WP_032304865.1 | hypothetical protein | - |
| NZD79_RS24330 (NZD79_24330) | 12697..12915 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NZD79_RS24335 (NZD79_24335) | 12917..13222 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NZD79_RS24340 (NZD79_24340) | 13223..14029 | + | 807 | WP_032304863.1 | site-specific integrase | - |
| NZD79_RS24345 (NZD79_24345) | 14209..14853 | + | 645 | WP_032266348.1 | ParA family protein | - |
| NZD79_RS24350 (NZD79_24350) | 14940..15248 | + | 309 | WP_032266350.1 | hypothetical protein | - |
| NZD79_RS24355 (NZD79_24355) | 15501..16198 | + | 698 | WP_259568234.1 | IS1 family transposase IS1R | Transposase |
| NZD79_RS24360 (NZD79_24360) | 16692..17192 | - | 501 | WP_032304856.1 | IS3 family transposase ISBope1 | Transposase |
| NZD79_RS24365 (NZD79_24365) | 17417..18181 | - | 765 | WP_000104222.1 | hypothetical protein | - |
| NZD79_RS24370 (NZD79_24370) | 18648..19277 | - | 630 | WP_032230509.1 | putative ABC transporter ATP-binding protein YknY | VF |
| NZD79_RS24375 (NZD79_24375) | 19274..20053 | - | 780 | WP_248783591.1 | HlyD family secretion protein | - |
| NZD79_RS24380 (NZD79_24380) | 20010..21143 | - | 1134 | WP_000371016.1 | TolC family protein | - |
| NZD79_RS24385 (NZD79_24385) | 21218..22345 | - | 1128 | WP_259568235.1 | permease | - |
| NZD79_RS24390 (NZD79_24390) | 22414..22773 | - | 360 | WP_000760019.1 | hypothetical protein | VF |
| NZD79_RS24395 (NZD79_24395) | 23037..23669 | - | 633 | Protein_25 | IS256 family transposase IS1414 | Transposase |
| NZD79_RS24400 (NZD79_24400) | 23714..24453 | + | 740 | Protein_26 | IS3 family transposase | - |
| NZD79_RS24405 (NZD79_24405) | 25126..25263 | + | 138 | Protein_27 | reverse transcriptase | - |
| NZD79_RS24410 (NZD79_24410) | 25433..26545 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| NZD79_RS24415 (NZD79_24415) | 26743..27657 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| NZD79_RS24420 (NZD79_24420) | 27657..27902 | + | 246 | WP_180496387.1 | hypothetical protein | - |
| NZD79_RS24425 (NZD79_24425) | 27933..28184 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| NZD79_RS24430 (NZD79_24430) | 28764..29612 | + | 849 | WP_259568231.1 | DUF4942 domain-containing protein | - |
| NZD79_RS24435 (NZD79_24435) | 29698..30033 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NZD79_RS24440 (NZD79_24440) | 30267..30599 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NZD79_RS24445 (NZD79_24445) | 30610..33312 | + | 2703 | WP_032347705.1 | hypothetical protein | Relaxase |
| NZD79_RS24450 (NZD79_24450) | 33360..34172 | - | 813 | WP_050492093.1 | helix-turn-helix transcriptional regulator | - |
| NZD79_RS24455 (NZD79_24455) | 34641..35578 | - | 938 | Protein_37 | IS91 family transposase ISSbo1 | Transposase |
| NZD79_RS24460 (NZD79_24460) | 35634..36788 | + | 1155 | Protein_38 | IS3 family transposase ISSd1 | Transposase |
| NZD79_RS24465 (NZD79_24465) | 36832..37035 | - | 204 | Protein_39 | transposase zinc-binding domain-containing protein | - |
| NZD79_RS24470 (NZD79_24470) | 37094..37366 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| NZD79_RS24475 (NZD79_24475) | 37880..39691 | + | 1812 | WP_153271685.1 | Heme/hemopexin transporter protein HuxB | VF |
| NZD79_RS24480 (NZD79_24480) | 39791..42349 | + | 2559 | Protein_42 | hypothetical protein | VF |
| NZD79_RS24485 (NZD79_24485) | 44461..46371 | + | 1911 | WP_032306380.1 | UDP-glucose:protein N-beta-glucosyltransferase | VF |
| NZD79_RS24490 (NZD79_24490) | 46368..46862 | + | 495 | WP_149843567.1 | DUF2919 family protein | - |
| NZD79_RS24495 (NZD79_24495) | 46843..47157 | + | 315 | WP_064752009.1 | Transcriptional regulatory protein RcsB | VF |
| NZD79_RS24500 (NZD79_24500) | 47201..47675 | + | 475 | Protein_46 | phosphoadenosine phosphosulfate reductase | - |
| NZD79_RS24505 (NZD79_24505) | 47635..47811 | + | 177 | Protein_47 | transposase zinc-binding domain-containing protein | - |
| NZD79_RS24510 (NZD79_24510) | 47836..49407 | - | 1572 | WP_032306376.1 | IS66 family transposase ISCro1 | Transposase |
| NZD79_RS24515 (NZD79_24515) | 49427..49774 | - | 348 | WP_012904570.1 | IS66 family transposase ISCro1 | Transposase |
| NZD79_RS24520 (NZD79_24520) | 49774..50452 | - | 679 | Protein_50 | IS66-like element accessory protein TnpA | - |
| NZD79_RS24525 (NZD79_24525) | 50493..51089 | + | 597 | Protein_51 | IS3 family transposase ISEcB1 | Transposase |
| NZD79_RS24530 (NZD79_24530) | 51332..52360 | + | 1029 | WP_259568233.1 | class 1 isoprenoid biosynthesis enzyme | - |
| NZD79_RS24535 (NZD79_24535) | 52364..52903 | + | 540 | WP_032304842.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NZD79_RS24540 (NZD79_24540) | 52967..53314 | + | 348 | Protein_54 | hypothetical protein | - |
| NZD79_RS24545 (NZD79_24545) | 53397..53549 | - | 153 | WP_032304841.1 | hypothetical protein | - |
| NZD79_RS24550 (NZD79_24550) | 53687..54384 | + | 698 | WP_248783592.1 | IS1 family transposase | - |
| NZD79_RS24555 (NZD79_24555) | 54498..54710 | + | 213 | WP_032304869.1 | hypothetical protein | - |
| NZD79_RS24560 (NZD79_24560) | 54955..55400 | + | 446 | Protein_58 | thermonuclease family protein | - |
| NZD79_RS24565 (NZD79_24565) | 55461..55669 | + | 209 | Protein_59 | hemolysin expression modulator Hha | - |
| NZD79_RS24570 (NZD79_24570) | 55707..56297 | + | 591 | WP_032304870.1 | DUF2726 domain-containing protein | - |
| NZD79_RS24575 (NZD79_24575) | 56537..56791 | + | 255 | WP_000083827.1 | replication regulatory protein RepA | - |
| NZD79_RS24580 (NZD79_24580) | 56898..57083 | + | 186 | Protein_62 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|