MGE detailed information
MGE type: Prophage MGE length: 87484 bp
Accession: NZ_CP103704 Location: 1936137..2023620 Organism: Escherichia coli strain ST361 Replicon: chromosome
Accession: NZ_CP103704 Location: 1936137..2023620 Organism: Escherichia coli strain ST361 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T41_RS09170 () | 1933161..1934132 | - | 972 | WP_000564726.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| M5T41_RS09175 () | 1934129..1934872 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| M5T41_RS09180 () | 1934913..1935308 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| M5T41_RS09185 () | 1935361..1936140 | - | 780 | WP_061355329.1 | DUF72 domain-containing protein | - |
| M5T41_RS09190 () | 1936137..1937396 | - | 1260 | WP_046659706.1 | Putative defective protein IntQ ; Integrase | Integrase |
| M5T41_RS09195 () | 1937439..1937684 | - | 246 | WP_023283988.1 | excisionase family protein | - |
| M5T41_RS09200 () | 1937688..1937903 | - | 216 | WP_063079899.1 | TraR/DksA family transcriptional regulator | - |
| M5T41_RS09205 () | 1937905..1938123 | - | 219 | WP_023304908.1 | hypothetical protein | - |
| M5T41_RS09210 () | 1938120..1939289 | - | 1170 | WP_069914300.1 | DNA cytosine methyltransferase | - |
| M5T41_RS09215 () | 1939286..1939942 | - | 657 | WP_086642390.1 | MT-A70 family methyltransferase | - |
| M5T41_RS09220 () | 1939939..1940097 | - | 159 | WP_023283323.1 | DUF1317 family protein | - |
| M5T41_RS09225 () | 1940094..1940774 | - | 681 | WP_061357276.1 | YqaJ viral recombinase family protein | - |
| M5T41_RS09230 () | 1940771..1941616 | - | 846 | WP_061357275.1 | phage recombination protein Bet | - |
| M5T41_RS09235 () | 1941632..1941916 | - | 285 | WP_016529276.1 | host nuclease inhibitor GamL | - |
| M5T41_RS09240 () | 1941924..1942895 | - | 972 | WP_072650041.1 | hypothetical protein | - |
| M5T41_RS09245 () | 1942983..1943177 | - | 195 | WP_019704100.1 | hypothetical protein | - |
| M5T41_RS09250 () | 1943170..1943280 | - | 111 | WP_223203116.1 | hypothetical protein | - |
| M5T41_RS09255 () | 1943640..1944329 | - | 690 | WP_042632509.1 | helix-turn-helix transcriptional regulator | - |
| M5T41_RS09260 () | 1944457..1944690 | + | 234 | WP_072650040.1 | helix-turn-helix domain-containing protein | - |
| M5T41_RS09265 () | 1944731..1944952 | + | 222 | WP_001548453.1 | CII family transcriptional regulator | - |
| M5T41_RS09270 () | 1945038..1945898 | + | 861 | WP_061355323.1 | replication protein | - |
| M5T41_RS09275 () | 1945895..1946743 | + | 849 | WP_114401068.1 | IS21 family transposase ISSsp5 | Transposase |
| M5T41_RS09280 () | 1946740..1947033 | + | 294 | WP_061355321.1 | hypothetical protein | - |
| M5T41_RS09285 () | 1947030..1947653 | + | 624 | WP_226456713.1 | hypothetical protein | - |
| M5T41_RS09290 () | 1947776..1947931 | + | 156 | Protein_1811 | DUF551 domain-containing protein | - |
| M5T41_RS09295 () | 1948222..1948689 | + | 468 | WP_001548459.1 | DUF551 domain-containing protein | - |
| M5T41_RS09300 () | 1948689..1948811 | + | 123 | WP_025269968.1 | hypothetical protein | - |
| M5T41_RS09305 () | 1948888..1949136 | + | 249 | WP_001548461.1 | hypothetical protein | - |
| M5T41_RS09310 () | 1949139..1949396 | + | 258 | WP_001548462.1 | DNA polymerase III subunit theta | - |
| M5T41_RS09315 () | 1949416..1949694 | + | 279 | WP_001548463.1 | hypothetical protein | - |
| M5T41_RS09320 () | 1949785..1950381 | + | 597 | WP_001548464.1 | DUF1367 family protein | - |
| M5T41_RS09325 () | 1950381..1950587 | + | 207 | WP_032148606.1 | hypothetical protein | - |
| M5T41_RS09330 () | 1950590..1950880 | + | 291 | WP_114401067.1 | DUF1364 domain-containing protein | - |
| M5T41_RS09335 () | 1950877..1951239 | + | 363 | WP_114401066.1 | crossover junction endodeoxyribonuclease RusA | - |
| M5T41_RS09340 () | 1951236..1951376 | + | 141 | WP_001548467.1 | YlcG family protein | - |
| M5T41_RS09345 () | 1951373..1952062 | + | 690 | WP_025269999.1 | bacteriophage antitermination protein Q | - |
| M5T41_RS09355 () | 1952518..1952817 | + | 300 | WP_122633140.1 | phage holin family protein | - |
| M5T41_RS09360 () | 1952814..1953353 | + | 540 | WP_259419745.1 | putative peptidoglycan-binding domain-containing protein | - |
| M5T41_RS09365 () | 1953350..1953697 | + | 348 | WP_032412824.1 | hypothetical protein | - |
| M5T41_RS09370 () | 1953694..1953969 | + | 276 | WP_046659666.1 | hypothetical protein | - |
| M5T41_RS09375 () | 1953920..1954117 | + | 198 | WP_046659665.1 | hypothetical protein | - |
| M5T41_RS09380 () | 1954215..1954523 | + | 309 | WP_061355317.1 | hypothetical protein | - |
| M5T41_RS09385 () | 1954520..1954786 | + | 267 | WP_046659662.1 | hypothetical protein | - |
| M5T41_RS09390 () | 1954956..1955384 | + | 429 | WP_046659660.1 | hypothetical protein | - |
| M5T41_RS09395 () | 1955722..1956219 | + | 498 | WP_250112530.1 | hypothetical protein | - |
| M5T41_RS09400 () | 1956170..1957570 | + | 1401 | WP_021312714.1 | PBSX family phage terminase large subunit | - |
| M5T41_RS09405 () | 1957808..1959259 | + | 1452 | WP_061355315.1 | DUF1073 domain-containing protein | - |
| M5T41_RS09410 () | 1959315..1959863 | + | 549 | WP_130963447.1 | phage minor head protein | - |
| M5T41_RS09415 () | 1959915..1961117 | + | 1203 | WP_114401063.1 | DUF2213 domain-containing protein | - |
| M5T41_RS09420 () | 1961121..1961615 | + | 495 | WP_000528476.1 | hypothetical protein | - |
| M5T41_RS09425 () | 1961627..1962568 | + | 942 | WP_114401062.1 | DUF2184 domain-containing protein | - |
| M5T41_RS09430 () | 1962608..1962889 | + | 282 | WP_023312776.1 | IS66 family transposase ISStau5 | Transposase |
| M5T41_RS09435 () | 1962858..1963277 | + | 420 | WP_086624362.1 | DUF4054 domain-containing protein | - |
| M5T41_RS09440 () | 1963274..1963780 | + | 507 | WP_259419750.1 | hypothetical protein | - |
| M5T41_RS09445 () | 1963780..1964184 | + | 405 | WP_114401060.1 | head-tail adaptor | - |
| M5T41_RS09450 () | 1964177..1964728 | + | 552 | WP_114401059.1 | hypothetical protein | - |
| M5T41_RS09455 () | 1964730..1965881 | + | 1152 | WP_114401058.1 | DUF3383 family protein | - |
| M5T41_RS09460 () | 1965892..1966332 | + | 441 | WP_025269949.1 | DUF3277 family protein | - |
| M5T41_RS09465 () | 1966336..1966785 | + | 450 | WP_000393949.1 | hypothetical protein | - |
| M5T41_RS09470 () | 1966827..1966979 | + | 153 | WP_114401078.1 | NTP pyrophosphohydrolase | - |
| M5T41_RS09475 () | 1966969..1968885 | + | 1917 | WP_259419751.1 | hypothetical protein | - |
| M5T41_RS09480 () | 1968885..1969460 | + | 576 | WP_114401056.1 | hypothetical protein | - |
| M5T41_RS09485 () | 1969536..1969763 | + | 228 | WP_024198481.1 | hypothetical protein | - |
| M5T41_RS09490 () | 1969766..1970833 | + | 1068 | WP_000081747.1 | hypothetical protein | - |
| M5T41_RS09495 () | 1970830..1971162 | + | 333 | WP_000734772.1 | hypothetical protein | - |
| M5T41_RS09500 () | 1971193..1971510 | - | 318 | WP_000506882.1 | DUF4236 domain-containing protein | - |
| M5T41_RS09505 () | 1971598..1972251 | + | 654 | WP_114401055.1 | Gp138 family membrane-puncturing spike protein | - |
| M5T41_RS09510 () | 1972253..1972606 | + | 354 | WP_114401054.1 | hypothetical protein | - |
| M5T41_RS09515 () | 1972606..1973802 | + | 1197 | WP_025269941.1 | baseplate J/gp47 family protein | - |
| M5T41_RS09520 () | 1973799..1974572 | + | 774 | WP_114401053.1 | DUF2612 domain-containing protein | - |
| M5T41_RS09525 () | 1974572..1975453 | + | 882 | WP_025270001.1 | hypothetical protein | - |
| M5T41_RS09530 () | 1975453..1975623 | + | 171 | WP_164686900.1 | hypothetical protein | - |
| M5T41_RS09535 () | 1975705..1977789 | + | 2085 | WP_140414703.1 | hypothetical protein | - |
| M5T41_RS09540 () | 1977798..1977977 | + | 180 | WP_025270003.1 | hypothetical protein | - |
| M5T41_RS09545 () | 1978091..1978408 | + | 318 | WP_025270004.1 | hypothetical protein | - |
| M5T41_RS09550 () | 1978581..1978676 | - | 96 | Protein_1862 | hypothetical protein | - |
| M5T41_RS09555 () | 1978673..1979239 | - | 567 | WP_000891621.1 | hydrolase | - |
| M5T41_RS09560 () | 1979549..1981321 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| M5T41_RS09565 () | 1981439..1981891 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| M5T41_RS09570 () | 1981920..1982660 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| M5T41_RS09575 () | 1982695..1983216 | + | 522 | WP_001379888.1 | crossover junction endodeoxyribonuclease RuvC | - |
| M5T41_RS09580 () | 1983218..1983820 | - | 603 | WP_001024904.1 | YebB family permuted papain-like enzyme | - |
| M5T41_RS09585 () | 1983891..1983956 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| M5T41_RS09590 () | 1984095..1984706 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| M5T41_RS09595 () | 1984715..1985725 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| M5T41_RS09600 () | 1985872..1986657 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| M5T41_RS09605 () | 1986654..1987409 | - | 756 | WP_061348895.1 | Zinc import ATP-binding protein ZnuC | VF |
| M5T41_RS09610 () | 1987488..1988420 | + | 933 | WP_072318590.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| M5T41_RS09615 () | 1988436..1989758 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| M5T41_RS09620 () | 1989878..1990849 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| M5T41_RS09625 () | 1990980..1992422 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| M5T41_RS09630 () | 1992550..1993419 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| M5T41_RS09635 () | 1993757..1995232 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| M5T41_RS09640 () | 1995467..1997278 | + | 1812 | WP_001069487.1 | phosphogluconate dehydratase | - |
| M5T41_RS09645 () | 1997315..1997956 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| M5T41_RS09650 () | 1998012..1999190 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| M5T41_RS09655 () | 1999324..1999614 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| M5T41_RS09660 () | 1999681..2000037 | + | 357 | WP_001295500.1 | protein YebF | - |
| M5T41_RS09665 () | 2000364..2001023 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| M5T41_RS09670 () | 2001232..2003292 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| M5T41_RS09675 () | 2003289..2003951 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| M5T41_RS09680 () | 2003975..2004631 | - | 657 | WP_000011657.1 | carbon-nitrogen hydrolase family protein YobB | - |
| M5T41_RS09685 () | 2004733..2004963 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| M5T41_RS09690 () | 2005102..2005476 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| M5T41_RS09695 () | 2005480..2006352 | + | 873 | WP_000879295.1 | copper homeostasis membrane protein CopD | - |
| M5T41_RS09700 () | 2006365..2006706 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2006734..2007005 | - | 272 | - | - | Antitoxin Detail |
| - | 2006864..2006967 | + | 104 | - | - | Toxin Detail |
| M5T41_RS09705 () | 2007102..2007758 | + | 657 | WP_000812720.1 | protein-serine/threonine phosphatase | - |
| M5T41_RS09710 () | 2007759..2007950 | - | 192 | WP_001296140.1 | YebW family protein | - |
| M5T41_RS09715 () | 2008055..2008291 | - | 237 | WP_001295499.1 | YebV family protein | - |
| M5T41_RS09720 () | 2008409..2009848 | - | 1440 | WP_061344305.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| M5T41_RS09725 () | 2009928..2012561 | - | 2634 | WP_001297532.1 | Intermembrane transport protein YebT | VF |
| M5T41_RS09730 () | 2012530..2013813 | - | 1284 | WP_001300803.1 | membrane integrity lipid transport subunit YebS | - |
| M5T41_RS09735 () | 2013943..2014440 | + | 498 | WP_059321916.1 | L-methionine (R)-S-oxide reductase | - |
| M5T41_RS09740 () | 2014537..2015235 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| M5T41_RS09745 () | 2015255..2017303 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| M5T41_RS09750 () | 2017495..2018376 | + | 882 | WP_000984517.1 | protease HtpX | - |
| M5T41_RS09755 () | 2018422..2019795 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| M5T41_RS09760 () | 2019972..2020763 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| M5T41_RS09765 () | 2020906..2021145 | - | 240 | WP_001211011.1 | YobH family protein | - |
| M5T41_RS09770 () | 2021304..2021447 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| M5T41_RS09775 () | 2021522..2021809 | + | 288 | WP_001006866.1 | YebO family protein | - |
| M5T41_RS09785 () | 2023255..2023398 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| M5T41_RS09790 () | 2023411..2023620 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| M5T41_RS09795 () | 2023786..2024595 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| M5T41_RS09800 () | 2024592..2025158 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| M5T41_RS09805 () | 2025587..2026045 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| M5T41_RS09810 () | 2026100..2026951 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| M5T41_RS09815 () | 2026964..2027764 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|