MGE detailed information
MGE type: Genomic_island MGE length: 48969 bp
Accession: NZ_CP103592 Location: 3852619..3901587 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: chromosome
Accession: NZ_CP103592 Location: 3852619..3901587 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S53_RS19035 (3848820) | 3848820..3849407 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| M5S53_RS19040 (3849421) | 3849421..3850893 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| M5S53_RS19045 (3850907) | 3850907..3852577 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| M5S53_RS19050 (3853662) | 3853662..3854225 | + | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| M5S53_RS19055 (3854555) | 3854555..3855349 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| M5S53_RS19060 (3855503) | 3855503..3856264 | + | 762 | WP_001213045.1 | protein HyxA | - |
| M5S53_RS19065 (3856306) | 3856306..3858597 | + | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| M5S53_RS19070 (3858781) | 3858781..3859449 | + | 669 | WP_001005267.1 | protein YkgH | - |
| M5S53_RS19075 (3859692) | 3859692..3860387 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| M5S53_RS19080 (3860380) | 3860380..3861807 | - | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| M5S53_RS19085 (3861818) | 3861818..3862537 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| M5S53_RS19090 (3863063) | 3863063..3863917 | - | 855 | WP_259384696.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| M5S53_RS19095 (3864144) | 3864144..3865469 | + | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| M5S53_RS19100 (3865578) | 3865578..3865814 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| M5S53_RS19105 (3865826) | 3865826..3866419 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| M5S53_RS19110 (3866579) | 3866579..3867448 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| M5S53_RS19115 (3867696) | 3867696..3868553 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| M5S53_RS19120 (3868678) | 3868678..3872925 | - | 4248 | WP_000092552.1 | hypothetical protein | VF |
| M5S53_RS19125 (3873491) | 3873491..3874342 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| M5S53_RS19130 (3874369) | 3874369..3875358 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| M5S53_RS19135 (3875389) | 3875389..3876282 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| M5S53_RS19140 (3876482) | 3876482..3877408 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| M5S53_RS19145 (3877565) | 3877565..3878485 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| M5S53_RS19150 (3878658) | 3878658..3879800 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| M5S53_RS19155 (3880273) | 3880273..3880374 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| M5S53_RS19160 (3880739) | 3880739..3881002 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| M5S53_RS19165 (3881002) | 3881002..3881142 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| M5S53_RS19170 (3881212) | 3881212..3881402 | - | 191 | Protein_3764 | hypothetical protein | - |
| M5S53_RS19175 (3882226) | 3882226..3882768 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| M5S53_RS19180 (3882843) | 3882843..3883430 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| M5S53_RS19185 (3883487) | 3883487..3884155 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| M5S53_RS19190 (3884181) | 3884181..3886706 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| M5S53_RS19195 (3886696) | 3886696..3888339 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| M5S53_RS19200 (3888308) | 3888308..3889018 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| M5S53_RS19205 (3889325) | 3889325..3889654 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| M5S53_RS19210 (3889666) | 3889666..3889832 | - | 167 | Protein_3772 | tail fiber assembly protein | - |
| M5S53_RS19215 (3889903) | 3889903..3890517 | - | 615 | WP_001019923.1 | YagU family protein | - |
| M5S53_RS19220 (3890732) | 3890732..3890917 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| M5S53_RS19225 (3890966) | 3890966..3891124 | + | 159 | Protein_3775 | integrase | - |
| M5S53_RS19230 (3891351) | 3891351..3891686 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| M5S53_RS19235 (3891894) | 3891894..3892670 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| M5S53_RS19240 (3892835) | 3892835..3893755 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| M5S53_RS19245 (3893742) | 3893742..3894524 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| M5S53_RS19250 (3894808) | 3894808..3897906 | + | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| M5S53_RS19255 (3897900) | 3897900..3899537 | + | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| M5S53_RS19260 (3899527) | 3899527..3900774 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| M5S53_RS19265 (3900981) | 3900981..3901139 | + | 159 | WP_071550417.1 | ash family protein | - |
| M5S53_RS19270 (3901117) | 3901117..3901587 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| M5S53_RS19275 (3901733) | 3901733..3901936 | + | 204 | Protein_3785 | integrase | - |
| M5S53_RS19285 (3902141) | 3902141..3903394 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| M5S53_RS19290 (3903406) | 3903406..3904509 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| M5S53_RS19295 (3904798) | 3904798..3905853 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| M5S53_RS19300 (3905892) | 3905892..3906293 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|