MGE detailed information
MGE type: Prophage MGE length: 62214 bp
Accession: NZ_CP103445 Location: 3496709..3558922 Organism: Erwinia pyrifoliae strain CP201486 Replicon: chromosome
Accession: NZ_CP103445 Location: 3496709..3558922 Organism: Erwinia pyrifoliae strain CP201486 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYP84_RS16490 (NYP84_16490) | 3491790..3493109 | + | 1320 | WP_259825842.1 | MFS transporter | - |
| NYP84_RS16495 (NYP84_16495) | 3493165..3493587 | - | 423 | WP_259819214.1 | TonB system transport protein ExbD | - |
| NYP84_RS16500 (NYP84_16500) | 3493593..3494327 | - | 735 | WP_014543204.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| NYP84_RS16505 (NYP84_16505) | 3494572..3495765 | + | 1194 | WP_012669367.1 | cystathionine beta-lyase | - |
| NYP84_RS16510 (NYP84_16510) | 3495916..3496572 | + | 657 | WP_012669368.1 | DedA family protein | - |
| NYP84_RS16515 (NYP84_16515) | 3496709..3497158 | + | 450 | WP_012667204.1 | DUF1795 domain-containing protein | - |
| NYP84_RS16520 (NYP84_16520) | 3497171..3501430 | + | 4260 | WP_259825844.1 | RHS repeat-associated core domain-containing protein | - |
| NYP84_RS16525 (NYP84_16525) | 3501435..3501887 | + | 453 | WP_012669373.1 | SMI1/KNR4 family protein | - |
| NYP84_RS16530 (NYP84_16530) | 3501947..3502249 | - | 303 | WP_012669374.1 | SymE family type I addiction module toxin | - |
| NYP84_RS16535 (NYP84_16535) | 3502328..3502729 | - | 402 | WP_012669375.1 | hypothetical protein | VF |
| NYP84_RS16540 (NYP84_16540) | 3502842..3505535 | + | 2694 | WP_259825845.1 | CHC2 zinc finger domain-containing protein | - |
| NYP84_RS16545 (NYP84_16545) | 3505734..3506789 | + | 1056 | WP_104945001.1 | Tyrosine recombinase XerD | VF |
| NYP84_RS16550 (NYP84_16550) | 3507381..3507557 | - | 177 | WP_259825846.1 | hypothetical protein | - |
| NYP84_RS16555 (NYP84_16555) | 3507576..3507752 | - | 177 | WP_157861020.1 | hypothetical protein | - |
| NYP84_RS16560 (NYP84_16560) | 3507887..3508069 | + | 183 | WP_081441632.1 | hypothetical protein | VF |
| NYP84_RS16565 (NYP84_16565) | 3508134..3508433 | + | 300 | WP_012669381.1 | hypothetical protein | VF |
| NYP84_RS16570 (NYP84_16570) | 3508448..3508660 | + | 213 | WP_012669382.1 | hypothetical protein | - |
| NYP84_RS16575 (NYP84_16575) | 3508708..3509010 | - | 303 | WP_259825848.1 | type I toxin-antitoxin system SymE family toxin | - |
| NYP84_RS16580 (NYP84_16580) | 3509089..3509490 | - | 402 | WP_012669375.1 | hypothetical protein | VF |
| NYP84_RS16585 (NYP84_16585) | 3509603..3512296 | + | 2694 | WP_012669376.1 | CHC2 zinc finger domain-containing protein | - |
| NYP84_RS16590 (NYP84_16590) | 3512511..3513566 | + | 1056 | WP_259818787.1 | Tyrosine recombinase XerD | VF |
| NYP84_RS16595 (NYP84_16595) | 3513827..3514069 | + | 243 | WP_012669378.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NYP84_RS16600 (NYP84_16600) | 3514059..3514343 | + | 285 | WP_012669379.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP84_RS16605 (NYP84_16605) | 3514708..3515142 | + | 435 | WP_259825850.1 | hypothetical protein | - |
| NYP84_RS16610 (NYP84_16610) | 3515207..3515659 | + | 453 | WP_259817769.1 | hypothetical protein | - |
| NYP84_RS16615 (NYP84_16615) | 3515661..3516017 | + | 357 | WP_259817771.1 | hypothetical protein | - |
| NYP84_RS16620 (NYP84_16620) | 3516085..3516387 | - | 303 | WP_259817772.1 | type I toxin-antitoxin system SymE family toxin | - |
| NYP84_RS16625 (NYP84_16625) | 3516462..3516866 | - | 405 | WP_259817774.1 | helix-turn-helix transcriptional regulator | - |
| NYP84_RS16630 (NYP84_16630) | 3516988..3519790 | + | 2803 | Protein_3216 | CHC2 zinc finger domain-containing protein | - |
| NYP84_RS16635 (NYP84_16635) | 3519879..3520935 | + | 1057 | Protein_3217 | Tyrosine recombinase XerD | VF |
| NYP84_RS16640 (NYP84_16640) | 3521196..3521440 | + | 245 | Protein_3218 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| NYP84_RS16645 (NYP84_16645) | 3521430..3521715 | + | 286 | Protein_3219 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NYP84_RS16650 (NYP84_16650) | 3522207..3522524 | + | 318 | WP_259816732.1 | hypothetical protein | - |
| NYP84_RS16655 (NYP84_16655) | 3522589..3523041 | + | 453 | WP_259817769.1 | hypothetical protein | - |
| NYP84_RS16660 (NYP84_16660) | 3523043..3523399 | + | 357 | WP_259817771.1 | hypothetical protein | - |
| NYP84_RS16665 (NYP84_16665) | 3523467..3523769 | - | 303 | WP_259817772.1 | type I toxin-antitoxin system SymE family toxin | - |
| NYP84_RS16670 (NYP84_16670) | 3523844..3524248 | - | 405 | WP_259817774.1 | helix-turn-helix transcriptional regulator | - |
| NYP84_RS16675 (NYP84_16675) | 3524370..3527063 | + | 2694 | WP_259825852.1 | CHC2 zinc finger domain-containing protein | - |
| NYP84_RS16680 (NYP84_16680) | 3527262..3528317 | + | 1056 | WP_259825854.1 | Tyrosine recombinase XerD | VF |
| NYP84_RS16685 (NYP84_16685) | 3528578..3528820 | + | 243 | WP_012669378.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NYP84_RS16690 (NYP84_16690) | 3528810..3529094 | + | 285 | WP_012669379.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP84_RS16695 (NYP84_16695) | 3529586..3529903 | + | 318 | WP_259816732.1 | hypothetical protein | - |
| NYP84_RS16700 (NYP84_16700) | 3529950..3530372 | + | 423 | WP_226060674.1 | hypothetical protein | - |
| NYP84_RS16705 (NYP84_16705) | 3530378..3530728 | + | 351 | WP_041474388.1 | hypothetical protein | - |
| NYP84_RS16710 (NYP84_16710) | 3530785..3531087 | - | 303 | WP_104945003.1 | SymE family type I addiction module toxin | - |
| NYP84_RS16715 (NYP84_16715) | 3531162..3531524 | - | 363 | WP_226060675.1 | helix-turn-helix transcriptional regulator | - |
| NYP84_RS16720 (NYP84_16720) | 3531627..3534314 | + | 2688 | WP_259825856.1 | CHC2 zinc finger domain-containing protein | - |
| NYP84_RS16725 (NYP84_16725) | 3534513..3535568 | + | 1056 | WP_104945001.1 | Tyrosine recombinase XerD | VF |
| NYP84_RS16730 (NYP84_16730) | 3536160..3536336 | - | 177 | WP_187298267.1 | hypothetical protein | - |
| NYP84_RS16735 (NYP84_16735) | 3536470..3536652 | + | 183 | WP_104945004.1 | hypothetical protein | - |
| NYP84_RS16740 (NYP84_16740) | 3536699..3537121 | + | 423 | WP_226060674.1 | hypothetical protein | - |
| NYP84_RS16745 (NYP84_16745) | 3537127..3537477 | + | 351 | WP_041474388.1 | hypothetical protein | - |
| NYP84_RS16750 (NYP84_16750) | 3537534..3537836 | - | 303 | WP_104945003.1 | SymE family type I addiction module toxin | - |
| NYP84_RS16755 (NYP84_16755) | 3537911..3538273 | - | 363 | WP_226060675.1 | helix-turn-helix transcriptional regulator | - |
| NYP84_RS16760 (NYP84_16760) | 3538376..3541063 | + | 2688 | WP_259825859.1 | CHC2 zinc finger domain-containing protein | - |
| NYP84_RS16765 (NYP84_16765) | 3541278..3542333 | + | 1056 | WP_012669377.1 | Tyrosine recombinase XerD | VF |
| NYP84_RS16770 (NYP84_16770) | 3542594..3542836 | + | 243 | WP_012669378.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NYP84_RS16775 (NYP84_16775) | 3542826..3543110 | + | 285 | WP_012669379.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP84_RS16780 (NYP84_16780) | 3544177..3545217 | + | 1041 | WP_012666458.1 | IS630 family transposase ISEc33 | Transposase |
| NYP84_RS16785 (NYP84_16785) | 3545342..3546694 | + | 1353 | WP_012669399.1 | adenylate/guanylate cyclase domain-containing protein | - |
| NYP84_RS16790 (NYP84_16790) | 3546964..3547368 | - | 405 | WP_012669259.1 | hypothetical protein | - |
| NYP84_RS16795 (NYP84_16795) | 3547380..3550181 | - | 2802 | WP_259825860.1 | conjugative transfer ATPase | - |
| NYP84_RS16800 (NYP84_16800) | 3550181..3550579 | - | 399 | WP_259826329.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| NYP84_RS16805 (NYP84_16805) | 3550615..3552123 | - | 1509 | WP_012669262.1 | TIGR03752 family integrating conjugative element protein | - |
| NYP84_RS16810 (NYP84_16810) | 3552123..3552986 | - | 864 | WP_012669263.1 | TIGR03749 family integrating conjugative element protein | - |
| NYP84_RS16815 (NYP84_16815) | 3552983..3553642 | - | 660 | WP_012669264.1 | TIGR03746 family integrating conjugative element protein | - |
| NYP84_RS16820 (NYP84_16820) | 3553639..3554013 | - | 375 | WP_012669265.1 | TIGR03750 family conjugal transfer protein | - |
| NYP84_RS16825 (NYP84_16825) | 3554023..3554244 | - | 222 | Protein_3255 | TIGR03745 family integrating conjugative element membrane protein | - |
| NYP84_RS16835 (NYP84_16835) | 3555469..3555630 | - | 162 | WP_259825862.1 | hypothetical protein | - |
| NYP84_RS16840 (NYP84_16840) | 3555643..3555888 | - | 246 | WP_004168502.1 | TIGR03758 family integrating conjugative element protein | - |
| NYP84_RS16845 (NYP84_16845) | 3555879..3556199 | - | 321 | WP_004168501.1 | RAQPRD family integrative conjugative element protein | - |
| NYP84_RS16850 (NYP84_16850) | 3556341..3556646 | - | 306 | WP_012669403.1 | DUF1493 family protein | - |
| NYP84_RS16855 (NYP84_16855) | 3556640..3557104 | - | 465 | WP_012669404.1 | hypothetical protein | - |
| NYP84_RS16865 (NYP84_16865) | 3559008..3559352 | + | 345 | WP_259825864.1 | hypothetical protein | - |
| NYP84_RS16870 (NYP84_16870) | 3559409..3560572 | + | 1164 | WP_259825866.1 | IS256 family transposase | - |
| NYP84_RS16875 (NYP84_16875) | 3560629..3561837 | + | 1209 | WP_012669407.1 | IS256 family transposase | - |
| NYP84_RS16880 (NYP84_16880) | 3562659..3562871 | - | 213 | WP_226060677.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|