MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 85854 bp
Accession: NZ_CP102135 Location: 948050..1033903 Organism: Streptococcus suis strain M106471_S40 Replicon: chromosome
Accession: NZ_CP102135 Location: 948050..1033903 Organism: Streptococcus suis strain M106471_S40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ98_RS04795 (NQZ98_04795) | 943390..945345 | + | 1956 | WP_171997306.1 | fructose-specific PTS transporter subunit EIIC | - |
| NQZ98_RS04800 (NQZ98_04800) | 945441..945815 | + | 375 | WP_002934959.1 | DUF1149 family protein | - |
| NQZ98_RS04805 (NQZ98_04805) | 945817..946668 | + | 852 | WP_024400551.1 | DegV family protein | - |
| NQZ98_RS04810 (NQZ98_04810) | 946677..947444 | + | 768 | WP_024400552.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| NQZ98_RS04815 (NQZ98_04815) | 947441..948652 | + | 1212 | WP_024400553.1 | CCA tRNA nucleotidyltransferase | - |
| NQZ98_RS04820 (NQZ98_04820) | 948645..950513 | + | 1869 | WP_024400554.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| NQZ98_RS04825 (NQZ98_04825) | 950514..950849 | + | 336 | WP_171997307.1 | hypothetical protein | - |
| NQZ98_RS04830 (NQZ98_04830) | 950941..951900 | + | 960 | WP_024390350.1 | ROK family glucokinase | - |
| NQZ98_RS04835 (NQZ98_04835) | 952026..952304 | + | 279 | WP_024381822.1 | hypothetical protein | - |
| NQZ98_RS04840 (NQZ98_04840) | 952316..952618 | + | 303 | WP_044678163.1 | hypothetical protein | - |
| NQZ98_RS04845 (NQZ98_04845) | 952671..953510 | + | 840 | WP_024396052.1 | thymidylate synthase | - |
| NQZ98_RS04850 (NQZ98_04850) | 953846..954358 | + | 513 | WP_171997308.1 | dihydrofolate reductase | - |
| NQZ98_RS04855 (NQZ98_04855) | 954556..955782 | + | 1227 | WP_002934974.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| NQZ98_RS04860 (NQZ98_04860) | 955838..956425 | + | 588 | WP_014638915.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| NQZ98_RS04865 (NQZ98_04865) | 956448..956861 | + | 414 | WP_024380696.1 | nucleoside-diphosphate kinase | - |
| NQZ98_RS04870 (NQZ98_04870) | 956957..958789 | + | 1833 | WP_002943192.1 | translation elongation factor 4 | - |
| NQZ98_RS04875 (NQZ98_04875) | 958839..959021 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
| NQZ98_RS04880 (NQZ98_04880) | 959156..960463 | + | 1308 | WP_024400559.1 | excalibur calcium-binding domain-containing protein | - |
| NQZ98_RS04885 (NQZ98_04885) | 960525..960749 | + | 225 | WP_024400560.1 | hypothetical protein | - |
| NQZ98_RS04890 (NQZ98_04890) | 960848..961429 | + | 582 | WP_002934983.1 | thymidine kinase | - |
| NQZ98_RS04895 (NQZ98_04895) | 961708..962787 | + | 1080 | WP_024400561.1 | peptide chain release factor 1 | - |
| NQZ98_RS04900 (NQZ98_04900) | 962787..963620 | + | 834 | WP_171997309.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| NQZ98_RS04905 (NQZ98_04905) | 963607..964215 | + | 609 | WP_029743198.1 | L-threonylcarbamoyladenylate synthase | - |
| NQZ98_RS04910 (NQZ98_04910) | 964212..964643 | + | 432 | WP_024408913.1 | GNAT family N-acetyltransferase | - |
| NQZ98_RS04915 (NQZ98_04915) | 964667..965926 | + | 1260 | WP_024412091.1 | serine hydroxymethyltransferase | - |
| NQZ98_RS04920 (NQZ98_04920) | 965926..966900 | + | 975 | WP_002943200.1 | nucleoid-associated protein | - |
| NQZ98_RS04925 (NQZ98_04925) | 966901..967500 | + | 600 | WP_002934990.1 | lysozyme family protein | - |
| NQZ98_RS04930 (NQZ98_04930) | 967601..968359 | + | 759 | WP_002943202.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| NQZ98_RS04935 (NQZ98_04935) | 968376..969125 | + | 750 | WP_024412093.1 | DUF6287 domain-containing protein | - |
| NQZ98_RS04940 (NQZ98_04940) | 969147..969500 | + | 354 | WP_024412094.1 | HIRAN domain-containing protein | - |
| NQZ98_RS04945 (NQZ98_04945) | 969521..970378 | - | 858 | WP_024412095.1 | hypothetical protein | - |
| NQZ98_RS04950 (NQZ98_04950) | 970498..971286 | - | 789 | WP_024400570.1 | hypothetical protein | - |
| NQZ98_RS04955 (NQZ98_04955) | 971482..973191 | + | 1710 | WP_024400571.1 | AAA family ATPase | - |
| NQZ98_RS04960 (NQZ98_04960) | 973188..974237 | + | 1050 | WP_024400572.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| NQZ98_RS04965 (NQZ98_04965) | 974411..975961 | - | 1551 | WP_024400573.1 | glutamine-hydrolyzing GMP synthase | - |
| NQZ98_RS04970 (NQZ98_04970) | 976237..976935 | + | 699 | WP_024400574.1 | GntR family transcriptional regulator | - |
| NQZ98_RS04975 (NQZ98_04975) | 977037..977369 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| NQZ98_RS04980 (NQZ98_04980) | 977382..978956 | + | 1575 | WP_014637933.1 | signal recognition particle protein | - |
| NQZ98_RS04985 (NQZ98_04985) | 979150..979818 | + | 669 | WP_002935003.1 | SatD family protein | - |
| NQZ98_RS04990 (NQZ98_04990) | 979822..980562 | + | 741 | WP_171997310.1 | DUF3307 domain-containing protein | - |
| NQZ98_RS04995 (NQZ98_04995) | 980627..981148 | + | 522 | WP_024400576.1 | AAA family ATPase | - |
| NQZ98_RS05000 (NQZ98_05000) | 981326..982396 | + | 1071 | WP_044689537.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| NQZ98_RS05005 (NQZ98_05005) | 982466..983974 | - | 1509 | WP_257116686.1 | Phosphomannomutase/phosphoglucomutase | VF |
| NQZ98_RS05010 (NQZ98_05010) | 984050..984991 | - | 942 | WP_257116687.1 | sensor histidine kinase | - |
| NQZ98_RS05015 (NQZ98_05015) | 984988..985653 | - | 666 | WP_257116688.1 | Response regulator protein GraR | VF |
| NQZ98_RS05020 (NQZ98_05020) | 985695..985961 | - | 267 | WP_024405694.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NQZ98_RS05025 (NQZ98_05025) | 985945..986196 | - | 252 | WP_044759715.1 | DUF6290 family protein | Antitoxin Detail |
| NQZ98_RS05030 (NQZ98_05030) | 986544..988514 | - | 1971 | WP_257116689.1 | FtsX-like permease family protein | - |
| NQZ98_RS05035 (NQZ98_05035) | 988515..989267 | - | 753 | WP_029173099.1 | ABC transporter ATP-binding protein YxdL | VF |
| NQZ98_RS05040 (NQZ98_05040) | 989276..989665 | - | 390 | WP_257116690.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NQZ98_RS05045 (NQZ98_05045) | 989678..989818 | - | 141 | WP_044773499.1 | hypothetical protein | - |
| NQZ98_RS05050 (NQZ98_05050) | 989917..990354 | - | 438 | WP_257116691.1 | TraX family protein | - |
| NQZ98_RS05055 (NQZ98_05055) | 990402..990641 | - | 240 | WP_257116692.1 | hypothetical protein | - |
| NQZ98_RS05060 (NQZ98_05060) | 990654..990791 | - | 138 | WP_002935027.1 | hypothetical protein | - |
| NQZ98_RS05065 (NQZ98_05065) | 990930..992096 | - | 1167 | WP_024400586.1 | carbamoyl phosphate synthase large subunit | - |
| NQZ98_RS05070 (NQZ98_05070) | 992114..992860 | - | 747 | WP_024400587.1 | alpha/beta hydrolase-fold protein | - |
| NQZ98_RS05075 (NQZ98_05075) | 992891..993718 | - | 828 | WP_024385230.1 | alpha/beta hydrolase | - |
| NQZ98_RS05080 (NQZ98_05080) | 993832..994425 | - | 594 | WP_228377330.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| NQZ98_RS05085 (NQZ98_05085) | 994422..994823 | - | 402 | WP_228380964.1 | hypothetical protein | - |
| NQZ98_RS05090 (NQZ98_05090) | 994890..995716 | - | 827 | Protein_956 | AraC family transcriptional regulator | - |
| NQZ98_RS05095 (NQZ98_05095) | 995793..997127 | - | 1335 | WP_024400588.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| NQZ98_RS05100 (NQZ98_05100) | 997323..998072 | - | 750 | WP_024400589.1 | HAD family hydrolase | - |
| NQZ98_RS05105 (NQZ98_05105) | 998257..999456 | - | 1200 | WP_024400590.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NQZ98_RS05110 (NQZ98_05110) | 999479..999706 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| NQZ98_RS05115 (NQZ98_05115) | 1000030..1000434 | - | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| NQZ98_RS05120 (NQZ98_05120) | 1000702..1001418 | - | 717 | WP_024383496.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NQZ98_RS05125 (NQZ98_05125) | 1001420..1001797 | - | 378 | WP_228381087.1 | lanthionine synthetase LanC family protein | - |
| NQZ98_RS05130 (NQZ98_05130) | 1001879..1002556 | - | 678 | WP_171997196.1 | ABC transporter permease | - |
| NQZ98_RS05135 (NQZ98_05135) | 1002534..1003271 | - | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| NQZ98_RS05140 (NQZ98_05140) | 1003264..1003965 | - | 702 | WP_000452012.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| NQZ98_RS05145 (NQZ98_05145) | 1004155..1005498 | - | 1344 | WP_000977993.1 | HAMP domain-containing sensor histidine kinase | - |
| NQZ98_RS05150 (NQZ98_05150) | 1005476..1006174 | - | 699 | WP_172030212.1 | Sensory transduction protein regX3 | VF |
| NQZ98_RS05155 (NQZ98_05155) | 1006215..1007588 | - | 1374 | WP_000719507.1 | S8 family serine peptidase | - |
| NQZ98_RS05160 (NQZ98_05160) | 1007685..1009568 | - | 1884 | WP_000261812.1 | SAG1250 family conjugative relaxase | - |
| NQZ98_RS05165 (NQZ98_05165) | 1009555..1009920 | - | 366 | WP_000431640.1 | MobC family plasmid mobilization relaxosome protein | - |
| NQZ98_RS05170 (NQZ98_05170) | 1009923..1010285 | - | 363 | WP_000140674.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| NQZ98_RS05175 (NQZ98_05175) | 1010623..1013166 | - | 2544 | WP_000601012.1 | AAA family ATPase | - |
| NQZ98_RS05180 (NQZ98_05180) | 1013167..1013934 | - | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| NQZ98_RS05185 (NQZ98_05185) | 1013934..1014410 | - | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| NQZ98_RS05190 (NQZ98_05190) | 1014480..1014770 | - | 291 | WP_000667951.1 | hypothetical protein | - |
| NQZ98_RS05195 (NQZ98_05195) | 1014826..1015380 | + | 555 | Protein_977 | rRNA adenine N-6-methyltransferase family protein | - |
| NQZ98_RS05200 (NQZ98_05200) | 1015550..1015810 | + | 261 | Protein_978 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| NQZ98_RS05205 (NQZ98_05205) | 1015839..1016000 | - | 162 | Protein_979 | recombinase | - |
| NQZ98_RS05210 (NQZ98_05210) | 1016055..1016318 | - | 264 | WP_000253176.1 | hypothetical protein | - |
| NQZ98_RS05215 (NQZ98_05215) | 1016318..1016548 | - | 231 | WP_001206986.1 | PC4/YdbC family ssDNA-binding protein | - |
| NQZ98_RS05220 (NQZ98_05220) | 1016594..1017448 | - | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| NQZ98_RS05225 (NQZ98_05225) | 1017457..1018410 | - | 954 | WP_257116693.1 | MobV family relaxase | - |
| NQZ98_RS05230 (NQZ98_05230) | 1018935..1019960 | - | 1026 | WP_257116694.1 | helicase RepA family protein | - |
| NQZ98_RS05235 (NQZ98_05235) | 1020114..1020587 | - | 474 | Protein_985 | sigma-70 family RNA polymerase sigma factor | - |
| NQZ98_RS05240 (NQZ98_05240) | 1020671..1021096 | - | 426 | WP_024412116.1 | sigma-70 family RNA polymerase sigma factor | - |
| NQZ98_RS05245 (NQZ98_05245) | 1021191..1021703 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| NQZ98_RS05250 (NQZ98_05250) | 1022191..1022361 | - | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| NQZ98_RS05255 (NQZ98_05255) | 1022416..1024335 | - | 1920 | WP_257116695.1 | tetracycline resistance ribosomal protection protein Tet(O) | VF |
| NQZ98_RS05260 (NQZ98_05260) | 1024702..1025076 | - | 375 | WP_001129922.1 | TnpV protein | - |
| NQZ98_RS05265 (NQZ98_05265) | 1025016..1025747 | - | 732 | WP_172039922.1 | peptidylprolyl isomerase | - |
| NQZ98_RS05270 (NQZ98_05270) | 1025842..1026132 | - | 291 | WP_172039921.1 | DUF5966 family protein | - |
| NQZ98_RS05275 (NQZ98_05275) | 1026146..1026445 | - | 300 | WP_024400602.1 | DUF5962 family protein | - |
| NQZ98_RS05280 (NQZ98_05280) | 1026516..1033361 | - | 6846 | WP_257116696.1 | SNF2-related protein | - |
| NQZ98_RS05285 (NQZ98_05285) | 1033412..1033963 | - | 552 | WP_257116697.1 | hypothetical protein | - |
| NQZ98_RS05290 (NQZ98_05290) | 1033947..1034138 | - | 192 | WP_024394077.1 | calcium-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|