MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP102061 Location: 3340020..3364962 Organism: Escherichia coli strain C31 Replicon: chromosome
Accession: NZ_CP102061 Location: 3340020..3364962 Organism: Escherichia coli strain C31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP943_RS16215 (3336868) | 3336868..3337587 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| NP943_RS16220 (3337584) | 3337584..3339215 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| NP943_RS16225 (3339396) | 3339396..3339626 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NP943_RS16230 (3339638) | 3339638..3339910 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| NP943_RS16235 (3340020) | 3340020..3342557 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| NP943_RS16240 (3342590) | 3342590..3343282 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| NP943_RS16245 (3343347) | 3343347..3343871 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| NP943_RS16250 (3344272) | 3344272..3348084 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| NP943_RS16255 (3348982) | 3348982..3349812 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| NP943_RS16260 (3350968) | 3350968..3354897 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| NP943_RS16265 (3355111) | 3355111..3355383 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| NP943_RS16270 (3355611) | 3355611..3355907 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NP943_RS16275 (3355935) | 3355935..3356108 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NP943_RS16280 (3356227) | 3356227..3357744 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| NP943_RS16285 (3357981) | 3357981..3359438 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| NP943_RS16290 (3359497) | 3359497..3361644 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| NP943_RS16295 (3361724) | 3361724..3363058 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NP943_RS16300 (3363424) | 3363424..3364962 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NP943_RS16305 (3365222) | 3365222..3365381 | - | 160 | Protein_3181 | integrase | - |
| NP943_RS16315 (3365761) | 3365761..3366336 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| NP943_RS16320 (3366373) | 3366373..3368070 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| NP943_RS16325 (3368046) | 3368046..3368384 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| NP943_RS16330 (3368500) | 3368500..3369801 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|