MGE detailed information
MGE type: IScluster/Tn MGE length: 33158 bp
Accession: NZ_CP101869 Location: 1250..34407 Organism: Escherichia coli strain LP5-1 Replicon: plasmid pLP5-1-37kb
Accession: NZ_CP101869 Location: 1250..34407 Organism: Escherichia coli strain LP5-1 Replicon: plasmid pLP5-1-37kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX81_RS23165 (NPX81_23190) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| NPX81_RS23170 (NPX81_23195) | 1205..2173 | + | 969 | WP_077816224.1 | IS5 family transposase IS903B | Transposase |
| NPX81_RS23175 (NPX81_23200) | 2340..2630 | - | 291 | WP_001471781.1 | hypothetical protein | - |
| NPX81_RS23180 (NPX81_23205) | 3289..3624 | + | 336 | WP_001039462.1 | plasmid stabilization protein StbA | - |
| NPX81_RS23185 (NPX81_23210) | 3633..3824 | + | 192 | WP_001515192.1 | hypothetical protein | - |
| NPX81_RS23190 (NPX81_23215) | 3835..4418 | - | 584 | Protein_5 | IS1 family transposase | - |
| NPX81_RS23195 (NPX81_23220) | 4952..5707 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| NPX81_RS23200 (NPX81_23225) | 5976..6321 | + | 346 | Protein_7 | IS1 family transposase | - |
| NPX81_RS23205 (NPX81_23230) | 6832..6972 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| NPX81_RS23210 (NPX81_23235) | 7045..7314 | + | 270 | WP_000079938.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NPX81_RS23215 (NPX81_23240) | 7314..7592 | + | 279 | WP_244578848.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NPX81_RS23220 (NPX81_23245) | 7628..9379 | - | 1752 | Protein_11 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NPX81_RS23225 (NPX81_23250) | 9383..9775 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| NPX81_RS23230 (NPX81_23255) | 9913..10797 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| NPX81_RS23235 (NPX81_23260) | 10829..12028 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| NPX81_RS23240 (NPX81_23265) | 12134..12784 | + | 651 | WP_050858789.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NPX81_RS23245 (NPX81_23270) | 12816..13058 | - | 243 | WP_000844627.1 | transposase | - |
| NPX81_RS23250 (NPX81_23275) | 13116..16082 | - | 2967 | WP_094307732.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NPX81_RS23255 (NPX81_23280) | 16086..16646 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NPX81_RS23260 (NPX81_23285) | 16822..17172 | - | 351 | WP_071830595.1 | DUF3330 domain-containing protein | - |
| NPX81_RS23265 (NPX81_23290) | 17375..18388 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| NPX81_RS23270 (NPX81_23295) | 18533..19030 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| NPX81_RS23275 (NPX81_23300) | 19142..19432 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| NPX81_RS23280 (NPX81_23305) | 19438..20276 | + | 839 | Protein_23 | Streptomycin 3''-adenylyltransferase | ARG |
| NPX81_RS23285 (NPX81_23310) | 20491..21750 | + | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| NPX81_RS23290 (NPX81_23315) | 21843..22681 | + | 839 | Protein_25 | Streptomycin 3''-adenylyltransferase | ARG |
| NPX81_RS23295 (NPX81_23320) | 22804..23136 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| NPX81_RS23300 (NPX81_23325) | 23383..24015 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| NPX81_RS23305 (NPX81_23330) | 24038..24313 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| NPX81_RS23310 (NPX81_23335) | 24316..25107 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| NPX81_RS23315 (NPX81_23340) | 25576..25821 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| NPX81_RS23320 (NPX81_23345) | 25859..26194 | - | 336 | Protein_31 | short-chain dehydrogenase | - |
| NPX81_RS23325 (NPX81_23350) | 26248..26952 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NPX81_RS23330 (NPX81_23355) | 28542..30079 | - | 1538 | Protein_33 | IS66 family transposase ISEc22 | Transposase |
| NPX81_RS23335 (NPX81_23360) | 30128..30475 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| NPX81_RS23340 (NPX81_23365) | 30505..31203 | - | 699 | Protein_35 | IS1 family transposase | - |
| NPX81_RS23345 (NPX81_23370) | 31410..32735 | - | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NPX81_RS23350 (NPX81_23375) | 32845..33543 | + | 699 | Protein_37 | IS1 family transposase IS1R | Transposase |
| NPX81_RS23355 (NPX81_23380) | 33562..34407 | + | 846 | Protein_38 | IS3 family transposase IS911 | Transposase |
| NPX81_RS23360 (NPX81_23385) | 34902..35873 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NPX81_RS23365 (NPX81_23390) | 35873..37039 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|