MGE detailed information
MGE type: Conjugative plasmid MGE length: 90508 bp
Accession: NZ_CP101371 Location: 1..90508 Organism: Salmonella enterica strain SC2014238 Replicon: plasmid pSC2014238-90k
Accession: NZ_CP101371 Location: 1..90508 Organism: Salmonella enterica strain SC2014238 Replicon: plasmid pSC2014238-90k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU30_RS24465 (231) | 231..485 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| NMU30_RS24470 (528) | 528..980 | + | 453 | WP_001535696.1 | hypothetical protein | - |
| NMU30_RS24475 (1654) | 1654..2721 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| NMU30_RS24480 (2721) | 2721..3158 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| NMU30_RS24485 (3172) | 3172..4854 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NMU30_RS24490 (4847) | 4847..6142 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| NMU30_RS24495 (6129) | 6129..6581 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| NMU30_RS24500 (6592) | 6592..8145 | + | 1554 | WP_000362202.1 | hypothetical protein | VF |
| NMU30_RS24505 (8158) | 8158..9255 | + | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NMU30_RS24510 (9273) | 9273..9887 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| NMU30_RS24515 (9897) | 9897..10457 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| NMU30_RS24520 (10442) | 10442..11098 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| NMU30_RS24525 (11098) | 11098..12186 | + | 1089 | Protein_12 | hypothetical protein | VF |
| NMU30_RS24530 (12386) | 12386..12634 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| NMU30_RS24535 (13051) | 13051..13431 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| NMU30_RS24540 (13428) | 13428..13775 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NMU30_RS24545 (13825) | 13825..15363 | + | 1539 | WP_255233089.1 | IS66 family transposase ISEc8 | Transposase |
| NMU30_RS24550 (16605) | 16605..17759 | + | 1155 | WP_001139957.1 | site-specific integrase | - |
| NMU30_RS24555 (17910) | 17910..18734 | + | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| NMU30_RS24560 (18819) | 18819..20021 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| NMU30_RS24565 (20081) | 20081..20665 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NMU30_RS24570 (21059) | 21059..21517 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| NMU30_RS24575 (21514) | 21514..22332 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| NMU30_RS24580 (22329) | 22329..23477 | + | 1149 | WP_001024971.1 | putative protein YggR | VF |
| NMU30_RS24585 (23474) | 23474..23764 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| NMU30_RS24590 (23779) | 23779..24330 | + | 552 | WP_012783942.1 | Phospholipase D | VF |
| NMU30_RS24595 (24420) | 24420..28187 | + | 3768 | WP_012783940.1 | DUF5710 domain-containing protein | - |
| NMU30_RS24600 (28205) | 28205..28552 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NMU30_RS24605 (28549) | 28549..29241 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NMU30_RS24610 (29252) | 29252..30235 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| NMU30_RS24615 (30238) | 30238..31527 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| NMU30_RS24620 (31527) | 31527..32231 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| NMU30_RS24625 (32231) | 32231..32758 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NMU30_RS24630 (32809) | 32809..33213 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| NMU30_RS24635 (33277) | 33277..33465 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NMU30_RS24640 (33449) | 33449..34249 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NMU30_RS24645 (34339) | 34339..37383 | + | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| NMU30_RS24650 (37383) | 37383..37997 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| NMU30_RS24655 (37964) | 37964..39166 | + | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| NMU30_RS24660 (39195) | 39195..39779 | + | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| NMU30_RS24665 (39876) | 39876..42044 | + | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| NMU30_RS24670 (42115) | 42115..42777 | + | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NMU30_RS24675 (42849) | 42849..43058 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NMU30_RS24680 (43450) | 43450..43626 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| NMU30_RS24685 (43691) | 43691..43987 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| NMU30_RS24690 (44287) | 44287..44538 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| NMU30_RS24695 (44610) | 44610..44762 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (44814) | 44814..44874 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44814) | 44814..44874 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44814) | 44814..44874 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44814) | 44814..44874 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| NMU30_RS24700 (45083) | 45083..46168 | + | 1086 | WP_000080543.1 | protein finQ | - |
| - (46238) | 46238..46295 | + | 58 | NuclAT_1 | - | - |
| - (46238) | 46238..46295 | + | 58 | NuclAT_1 | - | - |
| - (46238) | 46238..46295 | + | 58 | NuclAT_1 | - | - |
| - (46238) | 46238..46295 | + | 58 | NuclAT_1 | - | - |
| NMU30_RS24705 (46475) | 46475..47683 | + | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| NMU30_RS24710 (47702) | 47702..48772 | + | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| NMU30_RS24715 (48765) | 48765..51056 | + | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| NMU30_RS24720 (51093) | 51093..53792 | - | 2700 | WP_012783930.1 | hypothetical protein | Relaxase |
| NMU30_RS24725 (53803) | 53803..54135 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NMU30_RS24730 (54369) | 54369..54704 | + | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NMU30_RS24735 (54790) | 54790..55638 | - | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| NMU30_RS24740 (56218) | 56218..56469 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NMU30_RS24745 (56500) | 56500..56706 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| NMU30_RS24750 (56768) | 56768..57670 | - | 903 | WP_023150544.1 | ISNCY family transposase ISRor2 | VF |
| NMU30_RS24755 (57667) | 57667..58056 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| NMU30_RS24760 (58233) | 58233..58499 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| NMU30_RS24765 (58593) | 58593..59027 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| NMU30_RS24770 (59756) | 59756..60256 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| NMU30_RS24775 (60717) | 60717..61313 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| NMU30_RS24780 (61310) | 61310..62029 | - | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| NMU30_RS24785 (62026) | 62026..62460 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| NMU30_RS24790 (62513) | 62513..64471 | - | 1959 | WP_063267868.1 | ParB/RepB/Spo0J family partition protein | - |
| NMU30_RS24795 (64530) | 64530..64763 | - | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| NMU30_RS24800 (64821) | 64821..65348 | - | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| NMU30_RS24805 (65731) | 65731..65979 | - | 249 | WP_168212312.1 | hypothetical protein | - |
| NMU30_RS24810 (66132) | 66132..66323 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| NMU30_RS24815 (66320) | 66320..66742 | - | 423 | WP_000271703.1 | DUF1380 family protein | - |
| NMU30_RS24820 (66789) | 66789..67214 | - | 426 | WP_001198889.1 | antirestriction protein | - |
| NMU30_RS24825 (67626) | 67626..68396 | - | 771 | WP_012783922.1 | hypothetical protein | - |
| NMU30_RS24830 (68441) | 68441..68959 | - | 519 | WP_223350510.1 | DUF1380 family protein | - |
| NMU30_RS24835 (68889) | 68889..69110 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| NMU30_RS24840 (69111) | 69111..69794 | - | 684 | WP_000086127.1 | DNA methylase | - |
| NMU30_RS24845 (69870) | 69870..70181 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| NMU30_RS24850 (70185) | 70185..70607 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| NMU30_RS24855 (70610) | 70610..71590 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| NMU30_RS24860 (71928) | 71928..72263 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| NMU30_RS24865 (72268) | 72268..72354 | - | 87 | Protein_80 | hypothetical protein | - |
| NMU30_RS24870 (72358) | 72358..73260 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| NMU30_RS24875 (73678) | 73678..73926 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| NMU30_RS24880 (73923) | 73923..74360 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NMU30_RS24885 (74360) | 74360..75631 | + | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| NMU30_RS24890 (75827) | 75827..76453 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| NMU30_RS24895 (76450) | 76450..76752 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| NMU30_RS24900 (77259) | 77259..78653 | - | 1395 | WP_023150520.1 | protein YagA | - |
| NMU30_RS24905 (78596) | 78596..78940 | + | 345 | Protein_88 | WbuC family cupin fold metalloprotein | - |
| NMU30_RS24910 (78987) | 78987..79862 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| NMU30_RS24915 (80118) | 80118..81380 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NMU30_RS24920 (81680) | 81680..82908 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| NMU30_RS24925 (83271) | 83271..83873 | + | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| NMU30_RS24930 (83929) | 83929..84438 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| NMU30_RS24935 (85507) | 85507..86538 | - | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| NMU30_RS24940 (87496) | 87496..87774 | + | 279 | WP_219065241.1 | ash family protein | - |
| NMU30_RS24945 (87692) | 87692..87979 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NMU30_RS24950 (88421) | 88421..88954 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| NMU30_RS24955 (89208) | 89208..89891 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| NMU30_RS24960 (89905) | 89905..90471 | + | 567 | WP_000776428.1 | protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|