MGE detailed information
MGE type: Prophage MGE length: 32590 bp
Accession: NZ_CP101305 Location: 877155..909744 Organism: Escherichia coli strain 2002-3211 Replicon: chromosome
Accession: NZ_CP101305 Location: 877155..909744 Organism: Escherichia coli strain 2002-3211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK57_RS04335 (872473) | 872473..872988 | + | 516 | WP_071532567.1 | secretion protein EspH | - |
| NMK57_RS04340 (873207) | 873207..873566 | - | 360 | WP_001005228.1 | Tir chaperone family protein | - |
| NMK57_RS04345 (873817) | 873817..874428 | + | 612 | WP_000492642.1 | hypothetical protein | - |
| NMK57_RS04350 (874875) | 874875..876491 | + | 1617 | WP_001121326.1 | type III secretion system LEE translocated intimin receptor Tir | - |
| NMK57_RS04355 (876624) | 876624..877094 | + | 471 | WP_000098786.1 | type III secretion system LEE chaperone CesT | - |
| NMK57_RS04360 (877155) | 877155..880001 | + | 2847 | WP_000627900.1 | Intimin | VF |
| NMK57_RS04365 (880381) | 880381..881601 | - | 1221 | WP_000953242.1 | hypothetical protein | VF |
| NMK57_RS04370 (881744) | 881744..882799 | + | 1056 | WP_001273456.1 | hypothetical protein | VF |
| NMK57_RS04375 (882857) | 882857..883435 | + | 579 | WP_000381551.1 | hypothetical protein | VF |
| NMK57_RS04380 (883448) | 883448..884590 | + | 1143 | WP_000935767.1 | hypothetical protein | VF |
| NMK57_RS04385 (884611) | 884611..885555 | + | 945 | WP_001092013.1 | Protein EaeB | VF |
| NMK57_RS04390 (885562) | 885562..885969 | + | 408 | WP_000228587.1 | hypothetical protein | VF |
| NMK57_RS04395 (886006) | 886006..886227 | + | 222 | WP_001053840.1 | hypothetical protein | VF |
| NMK57_RS04400 (886233) | 886233..886511 | + | 279 | WP_000245867.1 | hypothetical protein | VF |
| NMK57_RS04405 (886727) | 886727..887482 | + | 756 | Protein_867 | Secreted effector protein EspF(U) | VF |
| NMK57_RS04410 (887857) | 887857..888441 | - | 585 | WP_001111205.1 | hypothetical protein | VF |
| NMK57_RS04415 (888639) | 888639..889277 | + | 639 | WP_001145628.1 | hypothetical protein | VF |
| NMK57_RS04420 (889569) | 889569..890933 | + | 1365 | WP_000953521.1 | hypothetical protein | VF |
| NMK57_RS04425 (890991) | 890991..891269 | + | 279 | WP_032279169.1 | hypothetical protein | - |
| NMK57_RS04435 (893448) | 893448..894161 | - | 714 | Protein_873 | DUF4942 domain-containing protein | - |
| NMK57_RS04440 (894237) | 894237..894911 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS04445 (894908) | 894908..895255 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS04450 (895275) | 895275..896831 | + | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS04455 (896864) | 896864..897007 | - | 144 | Protein_877 | hypothetical protein | - |
| NMK57_RS04460 (897092) | 897092..897289 | - | 198 | WP_000839246.1 | DUF957 domain-containing protein | - |
| NMK57_RS04465 (897301) | 897301..897789 | - | 489 | WP_000777666.1 | DUF5983 family protein | - |
| NMK57_RS04470 (897786) | 897786..898163 | - | 378 | WP_000854916.1 | TA system toxin CbtA family protein | Toxin Detail |
| NMK57_RS04475 (898210) | 898210..898584 | - | 375 | WP_024174207.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NMK57_RS04480 (898747) | 898747..898968 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| NMK57_RS04485 (899037) | 899037..899171 | - | 135 | Protein_883 | hypothetical protein | - |
| NMK57_RS04490 (899212) | 899212..900409 | + | 1198 | Protein_884 | IS3 family transposase | - |
| NMK57_RS04495 (900487) | 900487..900837 | - | 351 | WP_000624681.1 | IS66 family transposase ISEc47 | Transposase |
| NMK57_RS04500 (900834) | 900834..901259 | - | 426 | WP_000422707.1 | IS66 family transposase ISEc23 | Transposase |
| NMK57_RS04505 (901391) | 901391..901744 | - | 354 | Protein_887 | IS256 family transposase ISEic2 | Transposase |
| NMK57_RS04510 (901782) | 901782..902248 | + | 467 | Protein_888 | IS3 family transposase IS629 | Transposase |
| NMK57_RS04515 (902253) | 902253..902522 | - | 270 | Protein_889 | DDE-type integrase/transposase/recombinase | - |
| NMK57_RS04520 (902785) | 902785..903006 | + | 222 | WP_024210032.1 | transposase | - |
| NMK57_RS04525 (903035) | 903035..904591 | - | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS04530 (904611) | 904611..904958 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS04535 (904955) | 904955..905629 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| NMK57_RS04540 (905738) | 905738..907276 | + | 1539 | WP_101329731.1 | IS66 family transposase ISEc8 | Transposase |
| NMK57_RS04545 (907393) | 907393..908658 | - | 1266 | WP_001218843.1 | Prophage integrase IntS ; Integrase | Integrase |
| NMK57_RS04555 (909037) | 909037..909744 | - | 708 | WP_000234502.1 | DUF554 domain-containing protein | - |
| NMK57_RS04560 (909897) | 909897..909980 | + | 84 | WP_212591416.1 | hypothetical protein | - |
| NMK57_RS04565 (910142) | 910142..912277 | + | 2136 | WP_001370231.1 | ornithine decarboxylase | - |
| NMK57_RS04570 (912326) | 912326..913582 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|